Blg00906.0 (mRNA) - B. lanceolatum

Overview
NameBlg00906.0
Unique NameBlg00906.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:597322..599723-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00906.0 ID=Blg00906.0|Name=Blg00906.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2402bp|location=Sequence derived from alignment at Sc0000003:597322..599723- (Branchiostoma lanceolatum)
ATGGAGAAGCCGAAGACCAAGTTGACAGCAGTGGTTGAAGAACTTCGTGA GTTGGACATGATCTTTAGAGACGGATCTAACCTTACTGTTGTAGAGAAGG GATACGCACGGAAGCTGATTCAGGCCGTTAGTAGTGATAATAAGGTCCTG AAGTGCGAAGCGTTAAAAAGCCTGGGGGACTTATATCTGCACAAAGCGAA GATAAAGAAACAAAAGGCGGAGAACTTCCACAAGGCCTGTTCGCTGTACA AGGAAGTCTTAAGATATTTCAAAAGTAAGGGGGAGAGACAAGTTATACAA CATCGTATCAGATATGCAGAGAAGCGTACAAAACTGACAGATGATCAAAA TCGTACGAAGTCCGGGGCTGGGAGTTCAGCTAACGTCACATTGTCTGTGG CTGAGACACTTCAAGATGTGGAAAAGAAAACCAAGATGAAAGGATCCGGT GTGATGCCCCTGATTGAAAGTTATACAAATTCCTTTGTGAAAGCAATCGT CGCTAGAGATAATCGTCTCAAAATAGAGTCTTTGAAGAGCCTTGGGGATC TGTACCTAGAGAAGGGAAGGGTTGGCAGGGACGAGGCAGCATTCACCACA TCAGCTGGCCTGTACCGAGCGGCGCTGGACCGCTGTGAAGATTCAGATGG CAGAGAAACACTGAAGCACCGCATCAAGTACGCAGAGAAAGTCAAGGGAA AAGTAAAGAAGGTAGGAGGGCAAACTTGAGATTTACATGTCTCCGTTCTG AAATAGAAATAATCTAGTCTCGTTTGAAATGTTTTGTGTTAGGGATCATG CCCGTTTCTGCATTTGTGCGAAAAGAAATTAAGGTTTACTTTATATTGAT ATACATATATATATATATATATATATATATATATATATATATATATATAT ATCGTTTACTCCAGTGTTAAATGTTGGGAGGTTAAAACGCTCTTTTGAAT TGAAACATTGCCTAAATAAAGTCTAGCTTTTCAACCGCACTTTACTCTTA CTGAAACATCTACAGGAAACCGGACACCCTGGGATCGAGATCATTGACAC ATGGGTCACGTGTTCTCAGATTGTACGTCAAACAACCCGTGAAACACAGG ATGAAACCGACAGGTTTGTCACATACTTACTTATGACACTGATATGGCAA GTTTCAAAATGTCTTGTTTATTATCTGAAATATAGATTTGTTAGAAGGGT ATAGTTGTAAATATATCTCATTCTTCCCTGTATACAGTACATGCCAAGAC CAGCTGCAGGAGGGCTGCAGGGCCCTGCAGACAGGGGACCTGGACACGGC AGAGGAACACTTTTCAGTTGCGCTCAAGGCCGTCCATGCAGAAGGTAAGG ATATCTGATAACAAGACTATAGAGCATCAGGGTTAACGTACGCACGCTGA CGTGTGATTGGACCTTGAACCAATCCATGAAGTTTAACGATCAGTAGAAT CAGAAAAACTGCTACTATTTGTGACATGTAATTTGTGACCGATGCTACAT CTTCAAATACAGCCCAACACAGGAAAGAGGTAGAGCCCCTCTGCAAGTTG AGCGAAGTCTACCTGAAGAGAGGAGTGCAGTCAAGAGACGGGGGAGATTT CACCAAGGCTGCAGCACTCTCTAATGCAGCACTGGTAAGAGCAAGGGCGA ATGACAGAGAGGGCATCAAACAAACAATCAAGGAAATAACGTGCTCATTT ATTAAACACGCGCTTAGCATCAAAGAAACGATGGACATTAGGAACCCAGA GAAACACAAGTTACTTTTGAAAGAAGGTCGAGGCTACGTTGAAAGAGAGA TTAAAAGAATTGAGCAGCAGATAGATCCTTACAGCCTTGATGATGACGAC CCGAAGATAAGAGAAGTGGAGAAAAAGAGAGCGGAAGCAATCAAAACATT GTGTGAGACAATCGTTCAGCAGCGAAGAAAGTTCATAGCCGGCCTTGTAG ATGAATGTATGGAGGTAATGGGCCCCCCTCCTTGTAAGTACGCCATGATA GGCCTGGGTTCACAAGCCACGGGGCTGGTAACTCCGTACTCTGATCTGGA ATTCGCCATTTTGGTGGAGGAGGAAACAGAAAATAATGTCAGGTATTTCC GCAACCTCACTCACTTTCTGCATCTCAAAGTCATCAATCTAGGAGAAACC ATTCTACCGGCCATGGCGATTAAGTCGCTCAACGATTTCTCCTCAGACGA CCCACTGGACAGCTGGTTCTACGACTCTGTCACACCTCGCGGGTTTGCGT TTGACGGAGCCATGCCGCATGCATGCAAGACTCCGCTGGGCAGGGGGGAA ACTTGCGGACTTATCCACACACCAANTCCATGCCACATGCATGCAAGACT CCGCTGGGCAGGGGGGAAACTTGCGGACTTATCCACACACCAACCGAGAT GA

Coding sequence (CDS) from alignment at Sc0000003:597322..599723-

>Blg00906.0 ID=Blg00906.0|Name=Blg00906.0|organism=Branchiostoma lanceolatum|type=CDS|length=1806bp|location=Sequence derived from alignment at Sc0000003:597322..599723- (Branchiostoma lanceolatum)
ATGGAGAAGCCGAAGACCAAGTTGACAGCAGTGGTTGAAGAACTTCGTGA
GTTGGACATGATCTTTAGAGACGGATCTAACCTTACTGTTGTAGAGAAGG
GATACGCACGGAAGCTGATTCAGGCCGTTAGTAGTGATAATAAGGTCCTG
AAGTGCGAAGCGTTAAAAAGCCTGGGGGACTTATATCTGCACAAAGCGAA
GATAAAGAAACAAAAGGCGGAGAACTTCCACAAGGCCTGTTCGCTGTACA
AGGAAGTCTTAAGATATTTCAAAAGTAAGGGGGAGAGACAAGTTATACAA
CATCGTATCAGATATGCAGAGAAGCGTACAAAACTGACAGATGATCAAAA
TCGTACGAAGTCCGGGGCTGGGAGTTCAGCTAACGTCACATTGTCTGTGG
CTGAGACACTTCAAGATGTGGAAAAGAAAACCAAGATGAAAGGATCCGGT
GTGATGCCCCTGATTGAAAGTTATACAAATTCCTTTGTGAAAGCAATCGT
CGCTAGAGATAATCGTCTCAAAATAGAGTCTTTGAAGAGCCTTGGGGATC
TGTACCTAGAGAAGGGAAGGGTTGGCAGGGACGAGGCAGCATTCACCACA
TCAGCTGGCCTGTACCGAGCGGCGCTGGACCGCTGTGAAGATTCAGATGG
CAGAGAAACACTGAAGCACCGCATCAAGTACGCAGAGAAAGTCAAGGGAA
AAGTAAAGAAGGAAACCGGACACCCTGGGATCGAGATCATTGACACATGG
GTCACGTGTTCTCAGATTGTACGTCAAACAACCCGTGAAACACAGGATGA
AACCGACAGTACATGCCAAGACCAGCTGCAGGAGGGCTGCAGGGCCCTGC
AGACAGGGGACCTGGACACGGCAGAGGAACACTTTTCAGTTGCGCTCAAG
GCCGTCCATGCAGAAGCCCAACACAGGAAAGAGGTAGAGCCCCTCTGCAA
GTTGAGCGAAGTCTACCTGAAGAGAGGAGTGCAGTCAAGAGACGGGGGAG
ATTTCACCAAGGCTGCAGCACTCTCTAATGCAGCACTGGTAAGAGCAAGG
GCGAATGACAGAGAGGGCATCAAACAAACAATCAAGGAAATAACGTGCTC
ATTTATTAAACACGCGCTTAGCATCAAAGAAACGATGGACATTAGGAACC
CAGAGAAACACAAGTTACTTTTGAAAGAAGGTCGAGGCTACGTTGAAAGA
GAGATTAAAAGAATTGAGCAGCAGATAGATCCTTACAGCCTTGATGATGA
CGACCCGAAGATAAGAGAAGTGGAGAAAAAGAGAGCGGAAGCAATCAAAA
CATTGTGTGAGACAATCGTTCAGCAGCGAAGAAAGTTCATAGCCGGCCTT
GTAGATGAATGTATGGAGGTAATGGGCCCCCCTCCTTGTAAGTACGCCAT
GATAGGCCTGGGTTCACAAGCCACGGGGCTGGTAACTCCGTACTCTGATC
TGGAATTCGCCATTTTGGTGGAGGAGGAAACAGAAAATAATGTCAGGTAT
TTCCGCAACCTCACTCACTTTCTGCATCTCAAAGTCATCAATCTAGGAGA
AACCATTCTACCGGCCATGGCGATTAAGTCGCTCAACGATTTCTCCTCAG
ACGACCCACTGGACAGCTGGTTCTACGACTCTGTCACACCTCGCGGGTTT
GCGTTTGACGGAGCCATGCCGCATGCATGCAAGACTCCGCTGGGCAGGGG
GGAAACTTGCGGACTTATCCACACACCAANTCCATGCCACATGCATGCAA
GACTCCGCTGGGCAGGGGGGAAACTTGCGGACTTATCCACACACCAACCG
AGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00906.0Blg00906.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00906.0-exon-Sc0000003-1570713199:599013..599723Blg00906.0-exon-Sc0000003-1570713199:599013..599723Branchiostoma lanceolatumexon
Blg00906.0-exon-Sc0000003-1570713199:598611..598708Blg00906.0-exon-Sc0000003-1570713199:598611..598708Branchiostoma lanceolatumexon
Blg00906.0-exon-Sc0000003-1570713199:598380..598486Blg00906.0-exon-Sc0000003-1570713199:598380..598486Branchiostoma lanceolatumexon
Blg00906.0-exon-Sc0000003-1570713199:597322..598211Blg00906.0-exon-Sc0000003-1570713199:597322..598211Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:597322..599723 -
Properties
Property NameValue
GeneIDBlg00906