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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5364629..5371042+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00888.0 ID=Blg00888.0|Name=Blg00888.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6414bp|location=Sequence derived from alignment at Sc0000003:5364629..5371042+ (Branchiostoma lanceolatum)
TTTTCCGCAGGACTGACTGGTTCGTTCTCTGGCCGGCGAACTTCTGTGTG
TTGACAAGACCACGACGTGTACACCATGACTCCAGACGAGATACTGAACC
TGGCTGTTAAGGTGTTCTATCCTGCGATCGTGATCTTTGGCTTACCTGGT
AAGACCTGTCACCTCTTATAGCTTCTTAGTTACCTTAAATCAGTGAAGAC
ATTTCAAGCATGTTTGCAACTTCTTTTACTTGTGACAGTTGACACATTTT
ATAGATATACAAGAGGGGACAGCCGTATGCCCCGACTTCAACATTCCTAT
GTTCCGACTCCCCTGTGTTCTGACCCCCCTTATGTTAGTCAGGCTTAGGG
GTTTGAAGATGTAGGAACATAGGGCTGTCGGAATCTAGGAGTGAATTGTA
ATTGTACAAGAAACATGCACACTTAACTGAAGTCTAAACGTCGAGAATTA
AAGTTCAATGTTATCATTTTAGCCGGTACATTGTTGTAATAACAATCCCA
TTAGTAGCGACCTAAAGTCTGCAGAAACACACTTTTATTTTTAATGTACA
GTTGTTCGATCGTTAAAGCTTGAAGCTTGCGCTTTGTTTGGCGAGAAGTT
GTAGGCACTTCGGTATGCACCTTACAAACTTTGCAATATCTTGTGAAAGC
TATGATCAAATTGTTACAATAGCTAAAAGATCAGAATACCATAGAAAAAA
AGGAAGCTAAACTTTAGCTCAAGCTGTTATAAGCAAGTATGGCGGTAAAA
TGGATGCCTTACTGTGATCGAAGGTTTCTGATGTGTGCTCTTACATTACT
TCTCGCTTCAGCGTAATTCATGTCTACTTTGTAGTTGATGGTTGCTATGT
CACAGACGTTGAGCAGTGGTCTGATGGCTTTTTGTACACATTTTGGTATA
AAATCGATAGATAATGACTACAAATGGTTTATCAGCACTCAACTTGACAT
CTGGAATGACTTTATATCACCATTACTATATGGATAATTACGGTTGAACG
TCAAAGTATGGGAAACTATACAGAAGACCCTCCTCTTAAGTTTGACAGGT
TTTAGTCAGATGTTTTTGTGATGCTTCGAGTTACCATGGCACCATTAATT
TTTGACAGCTTCAACATTTAACAGATTGCCACCTACAAGTAGAGAAAAAG
TTTATTCCTTTACAATCCGTATATCGCTCTTGGCGTTTTACAGTCTACCT
TAAAGTTTTGAAAACCAACCGTAATGGTAACATTTTGCTATTGTTGTTAT
GTCCACTCGTTTCATGACCACTAACGTATGATTGCTACATTTTCTAATGG
TTTATTTGGCGTGATTACCCCCTATGAAGTGTACATAGTTGCCATGGCTA
CACTTATATGCCGTAATGTTTGTCGGATTTTCTGTGGACATTGTAAACAG
TAGCCTCTGAGTCAGACGGTGTGCCACTAGGCATCTAAAATTGAATAGTT
TGATCCTTAGTCGATACATGATTTAACTGAACATTTCTTTTGTAAGCTTT
TCAACAAGATGTAGATCGGGATTGTGTTTACTTAAACAGTTGCATTTCGA
GTTCTTTAAAGCAGTTTAAGATTTAGTACGCGGGGAAACTGGATGTTGTG
TTCAGAATGTGACCTACTTAACGGGAGAACAGGCCACCTGGTCCTGCAAT
CATTTCGGAAGCTTTGCCATATTTAAGTACAAGGTACTCTCTTTTACAGC
ATATGGCAGATACTCCTTCAATATAACAATTTCAGTCTAGCAACACCTTC
TAAAGATCCATTTCGTGGTGTGACGTCGTGTTATTCATTTTACCCCCGGA
AGCAAACAAACCATTTCCTCATTGTTTCCTAGTCAGCTGGGAACTAAAAA
AAAGCCAATGTGTTCAAATAAAGGAATGGAACCATACACGGGGGTGGTAT
CGTCATTCTGGCACTTTCGAACACGTGTTGACGTCATGTGTTCCAAGGCC
AAATGTCACAAGCGATTGGTCATTCAAATCAAGGAAGTTTGTAGTAGAGA
GGGATGAAAATTCGGCCAGTTTTCTATGACTGTTTTGGAATACAGTTATC
TATCGACAATATGTTGATCGCATCTTTACACATATTTTTGTTAAACATTA
AACTCAACGTGTCGATGAATCAATATACCTGTACGTAGGTTCATCCATTT
TTATCCACTTGTTTGTTTGTAGACATAGTTGTAGAAGACCTTACGACACT
CGTTGTACATTTGTTGTGTCAATAAAGATGTTCTTAAATTTCCGCAGCTA
ATGCTCTGACGTTGTACATCCTGATCCGGCGGCGTAGGCGACCCAGCGAG
GCGAAGTCCACCCCGGGTCTGTACCTGATCGCTCTGGCCGTGGCGGACTC
GCTAGTTCTCATCTTCATCGTCTTCATAGAAACGGTAGGACGAAGTTTTA
AGTAAAAAATAAGATTAGACGTTTTGATTGATATGAATTTCTTTTCAAAG
TACTAGCAACATTTTGTAAAAAGTTCGGAAACTAAAAAAAGGCATGTAGA
AATTTGGATTGTATGGCTTTATGTCAAAAAGTCTAGTACAGTGGGGATGC
AAAGATGAAAGTCTTTTGGGTAGTATTTCAAAGTAATTCCTTTTAACTTT
AAGGCATGCATGATACATGCATCTGAATTATAGTGAACAGTCGTGTCATC
CTTGACGGACAAATGGCAATGTCAAACATTTCCTAAACTTAGTAATATTT
TCGGATTTGTACATTTCTTGGTATCTGTTCTGAATGCTGACTCATTATTT
CTTTGGTGATTTTCCCGTTCCAGGTTGTCCATTTTGTGATCCTGGACCGG
CAGGTTTCCTTCGGCGGATTCTGCCCGTTCCTGATAACGTTAGACTACGG
CGCGCACAACGCCTCCATCTGGATCATAGTGGTCTACACTGTGGAGAGGT
CAGAATCTAACAATAACCATGAAATGTCAGGGCAACGTTTTCAACTATGT
GTTAGTCATTGCTGAGTGTGTGTTCTCACTGCTTAAGTAGAGACTATAAT
CAGTTGTTAAGCTTTCTACACACGATGAAAGGAGAAATTATAAGGTGTAA
CGTTGGGTAACCTAAATTCGCGGGGTACTTAAATTCGGGATTTTTCGAAA
ACGGGGTATTTAGGGATATGTGCTAGATGCAACATAAGTAATACCGCTAG
AAATGCAAACCTACCAGACTTACGTATTCAGAACGCTGTCTGAAAAGCTT
CGATAAGCATGGATTATAAGGCGACGAGGTCAAAAACTCTCCGTCCCTTA
TTGGAACAGTCTGAGGACTTCGTGGGAGAATTAAACAACATGGTTGTCGG
CTGGTTTATAAGAAAACTGTCACATCCGCTTCCTGCTAAACACAATTATT
TACAAGACAACTTATTACAATCTCTTTTGCTAACCTGCAACTGGATTCTA
AGTGTGATCAATCATCAAAACTCCTCTCTGTTGCTACAACCTACGGCACG
TGTATTTTCCCGCCGCCATATTGTTAACCAGAATCCTGTTGTCAAGCAGA
CGACAAAGGTTTGTGAGGAACACTTTTTTGTCTAAATGCTGCGTGTGATA
GTGGACTGAGGAAGATATTTTCCTCAAAGTTTGCTCCTAACACAACAAGG
AACACATGGACATAGTAGTATTACCATTGCTACGGCATCCAGCTAACTTC
CCATGAATAATGTAACGTTACACGTTGCCCGATGATGACGATGGGCCGAC
TTTGAGTGAAGTTCTACCGACTCAACACACGGGTTGTTCCCGAACTGGCC
TGATGTGTGCGGTACGGCCGTTTTTTCGTGTATTTTTTTTACTTGGACAC
GTCTATATCCATAGCACTCTCCTCAAGCCAAGGATGGAACGAATAGCTGC
TGTATAAAATGTGATTAGCGGTAAGATATTCAAGACGAATCTTCTCTCCC
GAATTAATGTGCCCCCCTGTCCGACAGCACCGTAATTGTGCGTGCGGCGG
ACGGTAGTTTCAAGTTGAAATATTATGGTGTCAGCACGACTAGAGACAAA
ATCTACCATATATATGATTAGTGCAAAGATAGTACATGATACTGACAGAA
TTATAGAAAAAAAGGATGGTTTATTGTTCTGCTAGATTGATTTCAGTCAA
CCATTATCAGAAAAATCCCGAATTTATGTTACCCAACGTTATAAAGGATT
GTGAATCAGACCACATTCGTGAGTGTTCATCACAGCCTTGCCATTACCAC
AACATGCTTCACCCTACTGCTGATGACAAAAATCCCCAGCTTGTTCCCTA
GCCTCTCTTCCTTTCTATTCTTACTTTATTTGTTTGCTGGAAAGTCTGGG
CACCCATCTTTGATACGTTTGGCTGTGTTTTACCTTCCGACTGTGTTTTT
CTGGATATGAAAAATCGCCCATGGTTTTTGCTACTAATATTATAGATGCA
GTGGCCTACATTTGACATACAAAAATATACAATAGGGGATCCAGAATATT
GCACAATTATTATTTATTTGAACATGCGAATACCAATATCATCACTGTTT
CAGGTTCATCGGAGTATACTTCCCCATTTGGAAGCACAAAGTGAGCAACG
CTAAGACAGCCAAACTGACCATAGCCGGGGTCTATGTGGTCTCCTACCTC
CTCGCCCTCCCTCACTTCTTCGCAGAAACCCCCACTACAGTCCAGGACGG
AAACACCACAATCTATCGCTGTGGTTATGTAGAAAATCTGTCGGCAGAAT
ACCGACTTGGGCTTATCTGGGGACAGAGTACTTTATCTTACATAATCCCT
TACATAGTCATTATCGGTTTTAACGGCATGATCATTTACAAATTGCGAAA
CATGAGAAAAATAGGCCCAGGGCTCGTTCGGCAGATGTCCGAGGTAACTG
CCACTGAGGCGTCTACCTCGATACAACCCCGCGCCGAGACATCCGATTCT
CCTCATCATTCTTTTCTACAAAAGAGGTTAAAAGAGGAGATAGAAGCGGG
TGCACAAAAGGCGGGAAATTCCGATGATGGCGGTGGCTCCAACTCTCGCG
ACAAGTCTCGCGTGACCACATGTGTCGAGATTCACCCTCGACCTCGGTCA
GCCTCATCAGACAACAACGACAGCAGTTCTGATGGAGACCGCAAGGAAGC
GCTTGTTCCTGTGGAAACAACGTCACCAGGTACTCAGCCTGACGTCAGCA
ACTCAGTGGCAACAGAAACAGCACCAGAATCTCGCCATTTCTCGCCCATG
ATCCCGCGAGGAAAAGCTCGACCAAATTCGCTCAGAGCGCGGGTACTGAA
AAAGACCACCACCCGAAAGCCAACTACTCGGTCCATGCACAAGCCCGTAG
TTGTGCTGATCACCATCAGTGCCATGTTCGTGTTGTTATGGTTCCCTCGC
CTGGTCATCTTTTTGATCGTACGGACAAACAATGTCGGACGGTTCGATAA
CTTTTCGTTCACGGTGGCAATCGAGGTGGCGAGCATGCTGGGCCTCCTGA
ACTCGGCTATCAACGTGTTTCTGTACGCCTATGCCGACAGCCGTTTCCGC
AACGACTTGGTCTCGATTCTAACGTGTGGCAGAAGATGAATGCGACAACA
CTGGCTCGTGTAACATGTGAAATTAGACATGTAAATAAGGCTTTGATCAA
CATAGCATGAGTCAGGCAGACAGACAGACAGACAGACAGACAGACAGACA
GACAAACAAACAAACAAACAAACAAACAAACAGAAAAACAAACAATATCT
CCATACACGGGGTTCATTGTAAAGCAATTTTGATATGGAAATGAAATACA
AGAGACTCTCGCTCGTTTTGCAATAGAAAATTTACGAACATGAAGTCATT
ATTCGACAGAGGAATGACTACCATAAATTATAAAACCGAATGAAGCTTGA
CTAGATGTATGGACTCAGCCGAGTGACGTGCTCATAATTTGCATAGAATG
ACGTCACAGAAACGTTCGATTCATTCTTCGAGAAAGACTGTAACTGCACA
GTCAAAAATGTTGTTGGGCTTAAGGTTTATTTCATTTTACTGTAATGATT
TCATTAGGATAAGAATCACACATATGAACTCAACAGAATGCTGTGTCACG
TTGTCAATCACGGTATCCATTTGGGTCTAAATGACGTCGTTATGCAATTT
ATTTCGGTCACAAATTATGGTAACAGTAATAACTTTATGGACTGAGCCTA
TAACCTTAAATCCATATACAGATAGATATGATATCAAAAATGAAATTGCT
TCTACGAGTTGCGCATTGTTTGTTCACAGCATAATCTATAATTTCAAGGT
CTGGTCACGTATGATGAATTATTGATATTTAGGGGACCTCATAACATCTG
AGGATTTGATTGTTTTTGCCTTGGCATCGTTTCAACGTTCCCTGTGTTGA
ACTAGAGTTAAGTATTTGTGCTACATATACTTCAGGTTTGCTATGGTAGT
TTAGCGATTAAGGG Coding sequence (CDS) from alignment at Sc0000003:5364629..5371042+ >Blg00888.0 ID=Blg00888.0|Name=Blg00888.0|organism=Branchiostoma lanceolatum|type=CDS|length=1371bp|location=Sequence derived from alignment at Sc0000003:5364629..5371042+ (Branchiostoma lanceolatum)
ATGACTCCAGACGAGATACTGAACCTGGCTGTTAAGGTGTTCTATCCTGC
GATCGTGATCTTTGGCTTACCTGCTAATGCTCTGACGTTGTACATCCTGA
TCCGGCGGCGTAGGCGACCCAGCGAGGCGAAGTCCACCCCGGGTCTGTAC
CTGATCGCTCTGGCCGTGGCGGACTCGCTAGTTCTCATCTTCATCGTCTT
CATAGAAACGGTTGTCCATTTTGTGATCCTGGACCGGCAGGTTTCCTTCG
GCGGATTCTGCCCGTTCCTGATAACGTTAGACTACGGCGCGCACAACGCC
TCCATCTGGATCATAGTGGTCTACACTGTGGAGAGGTTCATCGGAGTATA
CTTCCCCATTTGGAAGCACAAAGTGAGCAACGCTAAGACAGCCAAACTGA
CCATAGCCGGGGTCTATGTGGTCTCCTACCTCCTCGCCCTCCCTCACTTC
TTCGCAGAAACCCCCACTACAGTCCAGGACGGAAACACCACAATCTATCG
CTGTGGTTATGTAGAAAATCTGTCGGCAGAATACCGACTTGGGCTTATCT
GGGGACAGAGTACTTTATCTTACATAATCCCTTACATAGTCATTATCGGT
TTTAACGGCATGATCATTTACAAATTGCGAAACATGAGAAAAATAGGCCC
AGGGCTCGTTCGGCAGATGTCCGAGGTAACTGCCACTGAGGCGTCTACCT
CGATACAACCCCGCGCCGAGACATCCGATTCTCCTCATCATTCTTTTCTA
CAAAAGAGGTTAAAAGAGGAGATAGAAGCGGGTGCACAAAAGGCGGGAAA
TTCCGATGATGGCGGTGGCTCCAACTCTCGCGACAAGTCTCGCGTGACCA
CATGTGTCGAGATTCACCCTCGACCTCGGTCAGCCTCATCAGACAACAAC
GACAGCAGTTCTGATGGAGACCGCAAGGAAGCGCTTGTTCCTGTGGAAAC
AACGTCACCAGGTACTCAGCCTGACGTCAGCAACTCAGTGGCAACAGAAA
CAGCACCAGAATCTCGCCATTTCTCGCCCATGATCCCGCGAGGAAAAGCT
CGACCAAATTCGCTCAGAGCGCGGGTACTGAAAAAGACCACCACCCGAAA
GCCAACTACTCGGTCCATGCACAAGCCCGTAGTTGTGCTGATCACCATCA
GTGCCATGTTCGTGTTGTTATGGTTCCCTCGCCTGGTCATCTTTTTGATC
GTACGGACAAACAATGTCGGACGGTTCGATAACTTTTCGTTCACGGTGGC
AATCGAGGTGGCGAGCATGCTGGGCCTCCTGAACTCGGCTATCAACGTGT
TTCTGTACGCCTATGCCGACAGCCGTTTCCGCAACGACTTGGTCTCGATT
CTAACGTGTGGCAGAAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00888.0-exon-Sc0000003-1570713199:5364629..5364776 | Blg00888.0-exon-Sc0000003-1570713199:5364629..5364776 | Branchiostoma lanceolatum | exon |
| Blg00888.0-exon-Sc0000003-1570713199:5366876..5367012 | Blg00888.0-exon-Sc0000003-1570713199:5366876..5367012 | Branchiostoma lanceolatum | exon |
| Blg00888.0-exon-Sc0000003-1570713199:5367402..5367526 | Blg00888.0-exon-Sc0000003-1570713199:5367402..5367526 | Branchiostoma lanceolatum | exon |
| Blg00888.0-exon-Sc0000003-1570713199:5369132..5371042 | Blg00888.0-exon-Sc0000003-1570713199:5369132..5371042 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5364629..5371042 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00888 |
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