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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:7621675..7629817- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00853.4 ID=Blg00853.4|Name=Blg00853.4|organism=Branchiostoma lanceolatum|type=mRNA|length=8143bp|location=Sequence derived from alignment at Sc0000003:7621675..7629817- (Branchiostoma lanceolatum)
TACAAAGAGAGAGAGAGTTATGACCCTACTACCGTTAATTCCTCCCTTTC
CATTTTCCCAAGAGGTTCTCCTGGCCCGAGAAACAGTGTTTGATAACTTA
AGCTATCAAGTTTTAGAGGAAACTGATATGTAGAAAAGTACTCTATCCGT
TCAAGTATTTCATTAACTAGGTTAAAGTTGACGCATGGGTCACGTCCGGC
TTACGCAACCTCTGCTGAGGCCACTCGACAGCAAAAACTAATTCGTGGCA
CAGCGAGGCTAAAATCAGACAAACATGGCGATACCTCTGGCGCTATGGCG
GCCGTTTCAGCGATCGTTGGCTTCCCAAAGCCCATTTCGTATATCAGTTC
GATCGGGGCAACGTCTAAAGGTGGGCTCAAACGGACCAAAGTCGAGCATT
ACGTGTCGAGGGGAACACACACCTCAACTACAACAGGCCAGCCATCTTCT
GTGCCGTGTTGGATTCCCTCCACAACTTGTACAAGCTAGGAGGAGCTTCT
CTGTTTTAAGAAGGAGTTCGAGGCTTGAGGAAGGGCCAATAATGGAGAAA
GTGTGCCTGAACGAAGCTGCTAGGGTGGTAGAAGTGGAGTGGGCCGACGG
AGGTGTGAGCATGTTTCCGTACGTGTGGCTGAGGGACAATTGTCAGGTGA
GCCTGCGTTTGCACCTGTATATACGCATCGTTATCATATCTTTATTGTAT
GTGTATCTGTGTATCTGTGTCCTCGTCAGTATCTGTATCTATCGATGGCC
GTCTTTCTATGTAACACACAAGCTAGCCTATTAAACGAGTCTGTGTTTTG
GGCAGAAGTATTCAGGCATGTACAATTCCTTTGTCCCTGTTTTTGGGTCG
TGCACATTTTGTAGGTGAAGAGATATTCAATTTAGCATTAGTGTTAGTAC
GGTCGAGGTCACCTATCATAGTTACTTGTGCATCATTACGCACGTCAAGT
CATAAATCATCGATTCTTGCACTTAAAATGCATTCCGTTGCCGAAAACGG
ATTCTAATCAAATAGTGCCTGAGCTCCATGTGACCCAGATTGGAAAGTAG
GCACTAGGTCAACATGTGCCATTTGTTTCTCTTGGCAGGTTAACCTCACT
ATGAACTTTCAATAATAATGGTGACATTCGTATAAGCTAGTTCGGGGCTG
CTACTACGCATGTGCAGTGTCAAAGGTGAAGGACCCCGGCTTGTAAACAG
TGATCGTCTCGACATTGTCTCAATTTGCATAACAACGCCCAGACGGGTCT
TGTTTACGTCGCGGGGCCTTTACCTTTGACACTGCACATGCGTAGTAGCA
ACCCCGAACTAGCTTATTGTAGCCACACAAAACAATTATTGTCTGCATTT
GAAAGCAAACGAACTTAGACGAACTAGTAATAGAGACAGCAGCGAAATTA
CACTGGAGCTTGTAGCTTAAAGAAACAATTATTGTCTGCATTCTTAGGCA
GAGATGAATCAAGGAGAACTAGTCTATTAGGTTACTGCAAATGCATATAA
GTTCGCATGGTTTTTATTTTGCGTTTTTGATAGGGAGAAAATGGAGTGTT
CGTGGTGGCTTTAAGTTCACGTTTGAAACAAAAGTAGCGCTACAGTCATA
GGTGGGCAAAAAGTTTCGCGCTGGTTTTGAGTTCGCGCTGAAGAGTTCAC
CGCGAAAACCGCGAACATAAAACCACCGCGAACATTTCTGCATTAACAGT
ATCTCCTAGTTAATTGGATTATTTTGAATTGAATGATATCATATCGCTGT
TAATCTTGTAAATAAGGGTCATCCTATTTTGGTTAAGCCTCCTTTATACC
ACAGAAAAATAGCTCGCACTATACGAGCAGTGATACAACCGGCTTTCTCT
AATTTGGCACTTATAGACTTAAATTCGGCGACCGTTTGGCGCTATCAAAA
AAGTGGGCCAAACCTTGTTGAAAAACTGATCTGATCAACACCTATTTTCT
TGCCGGAAGATTCAATCTCAAGATTTATGAAGATTGGGGCGTAAGATCTG
GTCCAAATGCAAAATATCTTAGCTTATAGCAATATTAAAAACACACGAAA
ACATGAACGCGCCTTTTGATATCCTAAATTGGAAGATATGTTATCAATTT
TGGATATTCAATTATTATTATCGTAATCGCTTAAAACAAGTACGCCATTT
TTAATATTCCGTAGATAGTAAGATAAGTTAAGTTATCGATTTTGGATATT
CGTTTGTTATAAAAAAAAAAAATAACAAGTACGCACTTTTTGATATTCCA
CAGATTGGAAGATAAGTTACCAAATTTGAATGTTTGTTTATTTTTGCTTC
TTTGTTTATTGTTTGTTTATTTGTTTATCATCAGTGTCAGCAATGTTTTA
ACCCGGACTCCCGCGCCCGTCTGTTCTTGATGGCTGACTTGGACGTGAAT
CTTTCCCCTGTCACGGCTGACGTGTACGGTAAATAGATATCGATATCAAT
CATACATAAAGCTCAATTGATTTGAGAAAGTGGCATTTCTTCGGTCCAGC
TGTTAACCACAATACACCGAAATATGCCAGAATACAGCTAAATAAGGGTG
GAATCAACCGAAAGACAGTATACATTGATGACTTAGGGCTAAGGTAAATT
CGAAATTCAAACTATATTCTAGACATTGATTGGAGAAAGTGGCGATTCTT
CGGTCCAAGTGTTAACCAGAATACACCGGAATATGCCAGTGTACAGCTAA
ACAAGGGTAGAATCATCCGAAAGACAGTATGCATTGATGACTTAGGGCTA
AGGTTAATTCGAAATTCAAACTATATTCTAGACTGGTCGACATACGCACT
AATTACGCACATTGAACAAATAGTGCATATAGCTATAGTAAGGTGAACAT
TGCGACGGCCCGAGATCGTCTGGTAATTTCTTGTTCGCAGGGCCAAGCTA
TAAGTGTACATTACCGAGATATAGCAACCTGCGATGTTTACTCATCAATG
CACAAGTTGCATTTTGGTCGATTTCACATTTTTTTCTGTGTATTCTGGTA
AATAATTGGCCCCGTTTTTTGTATTGAAATAGGCATTTTTCGTCTCCGAT
GTTTAGAATCTATAGTCATAATAGTAGATTGTAGAGTGAACAATGGAACT
AGATTGTCATGTGACAAGCAATTGAATTAGACCAAAAAAAGTGAACAGAG
TGGACGGGCTATGTCAATAACTTTTATTTACAACTTGGCAAGAACTATGT
AACTACTTGTCACATATCACATGTACCCTGCACACATAATCTAGCATAGA
ACAAAGTGCCCGAAAGCAAACGACCTTTGATATCGCCTGTTCAAAACGTC
AATCATTTTCAGAGGCGTTGAGCAGTATGGGTAAATATAGAAACAATTGA
ACTGGAGCAGCATTCCTCAAACAAGAGTTCGAAGATCTCATACCTCCGTG
AAATATCTAGATTTTCTCTTCTTATGTCGTGATTGCTGTTCATTAGTTGG
GCAAATAAGGTTTTGATTAACATTACATGTGTTCATTAATCACTTTCTGT
CACTCTACGGTGAACGTGACTAGCATATTGAAAATACATATCTGCGAAAG
ACAAAGAGATAAAAAACAATACCTCCCTGTGAACTAGTAGGCTCTTTCAT
TGACCCCATGACCTGAAATGTCTGTTGGTTGTCACTACAAGGTTGATAAA
TTACTAATTTTGGCAACTCTAAACTTGACTTCCTGTCATTCTGGCAACTC
TAAGAATTACTTACTTTCACTCTAGCTCTGAGGTGAACGGGACTGACATA
GGAAAAATATATAATGCGGAAATTACACAAACAAACAAACAAACAAACAA
ACAGACTGGCAACAATACCTACCATTTCACGTACGTAACAAAATCATGAG
ATGCCCAATGTTATGCCCCCCTCCCCCTGTAGCAGCGGGAACCATGCTGA
CCATTGATTGGCCGGACGGGCACCACAGCCAGTACGATTGGTCCTGGCTC
AAGGGACGCTGTTTCTCTACCCAGGCCCTGGAAAAGAGGGGAAGGGGCTG
GCAGAGAAAGGTAAACATTCAACGACAGGCCTATCTTCTATACTTCTTTA
GTCACTGACGAAAGATAGCGGATGCTATCTGAAACGTCTGACTGTTTCAA
AATCTTATCCAGTTGCTTGAGTAATTATTTTTGGCAGATCTTATTACCTG
GATGGCTAACCTTCATCAACCAAGGAGGCATCAACGTATCTTCTATACTC
CCGATTCGTAGTCCAAAGGTCTAATACTCTTAACTCAAAAGCCTTACTCT
GAATATAATGCGGACTTGTAGCACAGTTGGCAAGTTGATCATCATCATCA
CATCTGTATCCATTGGCGGGCAGTCTGGTTGGCCTCTCGTAGATCGTTGA
CGAAATACGTCTTTAGATCGTAGACGACTTTTATCTCTTTTTATTCGTAT
TTTACATGATCTTATACTTGTATTTATTATCTTCACACACAATATAGAGA
AAATGTAGCTTTTCCCATGTGTTTCGCATTTTCGTTTTTGGCGACGCCTC
TGGTACGGAGCCTTTTATACAATGCCGAGATCCAGTTTCAAATGTTCTTC
CCCCTTCAAATCGTAATAAAGATTAAAAGAAAGCAACTGGTTCCCAAACT
GAACTTTTCTTGCTCGCAAAAGACGAGGTGCAAAAAGAGTAGGATTTACA
AACGTCATACGGAAGAAACACCGGTTTATCATTGTTGTTGTTGTTGTTTT
CCAACAGACTAAGCTCTGGGGGTCGGAGCTAGCACACGACTTGCCTAAAG
CTGACTTCCCCACCCTACTGACAGACGACCGTGCCCTGTATGACTTCCTG
TTCCGCCTGGACTCTGTCGGCCTCGTTCTGGTGCAGAACGTCCCCTGCGA
GACCGGACAGCTGGAAAGGCTGGCCAATCGGGTGGCGTTTCTCAGACACA
CCAACTATGGGTTAGTGTTGATAATTCGATTTTTACCTTCGTGAAAACGA
AGGCATTGTTGTCTGTGTGTTTGTGTAAAGAGGTTGATCCCAACTGTTGT
GTAAAGAGGTTGATCCCCACTGTTACACTACTCCCCCTTTTCTTTCAAGA
CTCGTCCCGAGTCTCCGAGTACGACATCCCTGTGTGATCTGATCGTTACT
CACAGGGCCGGCGTGGGAACCACTGTAAAAGCCCAAATTTAAATGGGCGA
GTACGCCGCTCCCGGGATTAGAACCCGCGCCAATCCCGATCCGCACGGCT
TGGGAAATCAACGCGCTAACCACTTGGTTAAAAGGTTCGGACCAGTTAGA
CTGGTCAGTTAGTGGAGGTTGATCCCCACTGTTACATTTGTCTTGGCGTG
TGTCCGTGGATGTTTGGATAGTGCAGAGTGACAGGATGTGAGGCGGAAGT
TGGTGTAACCGGATACTGGCAGGTAAGGAAAGTTGGCTTGGCCGGGTCCA
AAGTTGGTCGATCCAGCAAGCTGGAAGGAAAATGTATAAACAAAATTTGC
GACAAATTCGCAATAATGAACAAGATAGGAAATTCACATAGATTTCTGTT
TTTTTTCCAGTGTTTTTCGTTTCATATACCGTCTAGATACATTCTTCAAC
ATGTGTTCCAATAGTACTTGATCTTTATTCAAATTGCCATTAAATTTGTT
TTATATTTCTTATAAAATGATGCATTTACTTACACAGGAAGGAGTTTGTG
GTAAAGAGCAAGCCTAACCCCAGTAACGTGGCCTACACTAGTGCTAAACT
GGGACTACATACGGACTTACCACAGTACAACTACGCGCCAGGGGTACGTA
TACGTTTTTATTTCCTCCATGCATGTTTTTTTGTTGCTTTTTGTTTGTGT
TTCTTTGTTTGACTGTGTGCCCGTAGTAATTTAAATACAGCAGAGTGGCA
AAAAGTGAATGGTGGAACTACAGAGTAACAGGAAGTGGAGTATTGAAATA
GCTAATTCTATTTAGTCATCTATTTACAGAAGATTTGGTTTATTTCTAAG
ACGAAAAGTGCTATCGACGTTAACATAAAGTTCCCTTTCTCCCTGCATAA
TGGAACAGGCGAACAGGTCATTTATTGTAATAATTGACCACTCGTGATTT
ATTATTCACCACTTGTGGCACTTCGGCATCATAACCGGTTCGGAATGGTC
GACGTCATCTGGCTATATGATAATGTCCAACATTATCTACAAAGATGACC
GCAACTCCTTGTACCATAGAATCTTTCTGAACGATGGGTGATGCACGTAG
GTCTATGGCTTCTCCCTCAAACCCATTTGGATACTCTTTTGTATCTTCTT
TAAATAACAAAGATTTGCAATCATACAGGTTCAGATGCTCCACTGCATCG
AGCAGTGTAAGGGGGAGGGGGGCGACAACCACCTTGTGGACGGCTTCAAC
GTCGCTTACCAACTGAAGGAGGAGAACCCTGAAGCCTTCCGCCTTCTTAC
CACGCTCAAGATCAACTTCCAGGATGAAGGGATCGACTATCATAGGTTCT
ACTTGAGGGAGAGACGTCCTATAATCAGGTAAAATACTAGTAGCTCAGTG
AAAAATTTCATCAAGAACGCTTCGTTTGGGAACGCATTCTTCACACTGCT
GCCAACTCTTCGTTTGGGAACGCATTATTCACGTTGCAGCAGCGACACCT
AGCTGCAGTGCCATGAAGTCAGTTTTGCCATGAAGAGGGTGACAGACGGT
CACAGAAACGTTGACTGTTGTACAAAATGTAACTCTTTGGATGTAAATGA
AGAACTTTGTTATCCAGATACAATAAATGTTGATATGAGACATGGATTAC
GGAATTACAGCAGACGACATATATCATACTAGATAGTACATGTATTTGTG
ACACAAAATCTCGCAAACAGCTCTTTTATACATATATTTCATATATACTT
ATATTTGGCGACGCCTCAAATGTGAAGCCATAAGTGACCTGTAATACAGC
ATTTTGGCGACGCCCAAGGCACGATGCTATTAGATCTTTCATCTGGCTGC
TACTTACCGTCACCAAACCTTTACCTTTGTTGATCTTTCCGGGACATTTT
TTCAGCCTGGACGACATGGGCAATGTTGAGAACATCAACTATAACGACCA
GGTTCGTGACTCCATCTTGGATCTGCCCACCGACCAAGTCCAAGCGCTGT
ACGGCGCGCTGAAGGCCTACAACACCATCATGTACCGTCCCAAGAACTGC
GTACGACACAAAATGGCGGCAGGTCAGGCAAAATATTTTGTGGAAAGTAC
TTTGTCTTCTCCATGCTCGCCCCGACATNTCTCAGGGCGCATACGCAATC
AATCCGTGAACCAGCTTATTGCAACTTTTTGATGTCTGTCTAGGTGAAAT
GATCGCTTTCAACAACACCCGGACTCTCCACGGCCGCCTGGCCTACAGTC
AGACCGGCGGCACGCGGCATCTGCAGGGAGGCTACCTGGACTGGGATGAG
ATCTACTCGCGCATGCGCGTTCTCAAGACGGACCTGGGGATCCAAGACTA
GATACCAACCCATCAGTCTTTGCGAAGCTAGTTTGTATCAATAGACTGAT
CCCCCAAGGACCGCCCAAGTCGAAACGTAGAAATGGAAAAGAAAACTTGA
AAATGCAAATATTCGACGGACATGCAACCGCTCTCTCATTGGTCGAATCT
CTGATTACCGTGCTATCATTAGTTGAATTGCTAATTGTGTTGGACAGTCA
GGACCGGTCTATTTGGCCACACAATTCTTTCAATGACATTCATTTTCGAA
ATCTCAATGATGACTCTAAAGGTTTTTGAGTGGAATTCTCATGAAATTAT
GTACTATTCTTTCATCATTATATATTGAGATATCAATATTTCCTTTTTAT
CCATTTATAGCAATAGTACGATTGATATGGGAAGATAGTTAGAGTCCTAT
AATTCATCGTACCATAAAACACAATAAACCACTTATTACTTATGATTAAA
ACACATGATGGTGCAATATAGAATCTATCTTAAAAAGAGGACATATACAT
ATAATGCGTCATATTTTATAACGATGGAATATAATCTTTTATTGATGATA
TTGCACATCGTGATTTCTTTTGTATACGTTCATATATCAAAATTGACTTA
TTAAATGGCAAGTCGGATTAAGCTTTGTTACCTCCATGATCTCCATGTGA
AATGGAGGTATAGTGTTTGGCGTGTCTGTATGTCTGTCTGTGT Coding sequence (CDS) from alignment at Sc0000003:7621675..7629817- >Blg00853.4 ID=Blg00853.4|Name=Blg00853.4|organism=Branchiostoma lanceolatum|type=CDS|length=1428bp|location=Sequence derived from alignment at Sc0000003:7621675..7629817- (Branchiostoma lanceolatum)
ATGGCGATACCTCTGGCGCTATGGCGGCCGTTTCAGCGATCGTTGGCTTC
CCAAAGCCCATTTCGTATATCAGTTCGATCGGGGCAACGTCTAAAGGTGG
GCTCAAACGGACCAAAGTCGAGCATTACGTGTCGAGGGGAACACACACCT
CAACTACAACAGGCCAGCCATCTTCTGTGCCGTGTTGGATTCCCTCCACA
ACTTGTACAAGCTAGGAGGAGCTTCTCTGTTTTAAGAAGGAGTTCGAGGC
TTGAGGAAGGGCCAATAATGGAGAAAGTGTGCCTGAACGAAGCTGCTAGG
GTGGTAGAAGTGGAGTGGGCCGACGGAGGTGTGAGCATGTTTCCGTACGT
GTGGCTGAGGGACAATTGTCAGTGTCAGCAATGTTTTAACCCGGACTCCC
GCGCCCGTCTGTTCTTGATGGCTGACTTGGACGTGAATCTTTCCCCTGTC
ACGGCTGACGTGTACGCAGCGGGAACCATGCTGACCATTGATTGGCCGGA
CGGGCACCACAGCCAGTACGATTGGTCCTGGCTCAAGGGACGCTGTTTCT
CTACCCAGGCCCTGGAAAAGAGGGGAAGGGGCTGGCAGAGAAAGACTAAG
CTCTGGGGGTCGGAGCTAGCACACGACTTGCCTAAAGCTGACTTCCCCAC
CCTACTGACAGACGACCGTGCCCTGTATGACTTCCTGTTCCGCCTGGACT
CTGTCGGCCTCGTTCTGGTGCAGAACGTCCCCTGCGAGACCGGACAGCTG
GAAAGGCTGGCCAATCGGGTGGCGTTTCTCAGACACACCAACTATGGGAA
GGAGTTTGTGGTAAAGAGCAAGCCTAACCCCAGTAACGTGGCCTACACTA
GTGCTAAACTGGGACTACATACGGACTTACCACAGTACAACTACGCGCCA
GGGGTTCAGATGCTCCACTGCATCGAGCAGTGTAAGGGGGAGGGGGGCGA
CAACCACCTTGTGGACGGCTTCAACGTCGCTTACCAACTGAAGGAGGAGA
ACCCTGAAGCCTTCCGCCTTCTTACCACGCTCAAGATCAACTTCCAGGAT
GAAGGGATCGACTATCATAGGTTCTACTTGAGGGAGAGACGTCCTATAAT
CAGCCTGGACGACATGGGCAATGTTGAGAACATCAACTATAACGACCAGG
TTCGTGACTCCATCTTGGATCTGCCCACCGACCAAGTCCAAGCGCTGTAC
GGCGCGCTGAAGGCCTACAACACCATCATGTACCGTCCCAAGAACTGCGT
ACGACACAAAATGGCGGCAGGTGAAATGATCGCTTTCAACAACACCCGGA
CTCTCCACGGCCGCCTGGCCTACAGTCAGACCGGCGGCACGCGGCATCTG
CAGGGAGGCTACCTGGACTGGGATGAGATCTACTCGCGCATGCGCGTTCT
CAAGACGGACCTGGGGATCCAAGACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00853.4-exon-Sc0000003-1570713199:7629172..7629817 | Blg00853.4-exon-Sc0000003-1570713199:7629172..7629817 | Branchiostoma lanceolatum | exon |
| Blg00853.4-exon-Sc0000003-1570713199:7627390..7627483 | Blg00853.4-exon-Sc0000003-1570713199:7627390..7627483 | Branchiostoma lanceolatum | exon |
| Blg00853.4-exon-Sc0000003-1570713199:7625808..7625935 | Blg00853.4-exon-Sc0000003-1570713199:7625808..7625935 | Branchiostoma lanceolatum | exon |
| Blg00853.4-exon-Sc0000003-1570713199:7624908..7625110 | Blg00853.4-exon-Sc0000003-1570713199:7624908..7625110 | Branchiostoma lanceolatum | exon |
| Blg00853.4-exon-Sc0000003-1570713199:7624075..7624180 | Blg00853.4-exon-Sc0000003-1570713199:7624075..7624180 | Branchiostoma lanceolatum | exon |
| Blg00853.4-exon-Sc0000003-1570713199:7623340..7623539 | Blg00853.4-exon-Sc0000003-1570713199:7623340..7623539 | Branchiostoma lanceolatum | exon |
| Blg00853.4-exon-Sc0000003-1570713199:7622646..7622812 | Blg00853.4-exon-Sc0000003-1570713199:7622646..7622812 | Branchiostoma lanceolatum | exon |
| Blg00853.4-exon-Sc0000003-1570713199:7621675..7622524 | Blg00853.4-exon-Sc0000003-1570713199:7621675..7622524 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7621675..7629817 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00853 |
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