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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5938765..5948683+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00846.0 ID=Blg00846.0|Name=Blg00846.0|organism=Branchiostoma lanceolatum|type=mRNA|length=9919bp|location=Sequence derived from alignment at Sc0000003:5938765..5948683+ (Branchiostoma lanceolatum)
ATGCTTTTAGCACAAACTATCAGCTGTGCATCTTAGGCTCGGGTAATCAG
TGGCCCTGACCCGCTATGACCTTTAACCTTGATTGGCATTTTACTCGTCA
GCCATATTTGTTCGGACTCTGAGACAGGGTTCTCGTTAGCGCTTGTCTTC
AACTTCAACTTGCAGCAGCAAAGAAAGAAATACCTTTACCCACCTTACGG
TTCGGGTATAAAGCAGGTAGGTTGGACAGTATAAAGATAGACTTCAAAAT
GTGGTATTCTCTAAAACAGCTCGAATCATAGAAGGTACTAATTTTAGGGG
GGGGGGCGTGCTGACTGCTACTGGGGAACAAACAGCGTTCAAAGCGAGAA
AGCTTGCTGATTTTTCAAGACTAACTTTGTCATTTTTCATATAGACGACT
ATAGATCAGTACGGTAATGAGTAATTTGGTGTACGATTGGATCATGATTA
TAAATCAGACTAAATCAGTCGCTCAGCTACATATGTATTATGAAAGACCG
TAGACATTTAGATTTGAAGCTTTGCAAAAGGTTTTGCAAGAGAAACATTG
TCTGTAAAACGTTTAGCAGAAGAAAAGCATCCCGGGTGAATCTTTTCAGG
ACAGCGAGTGTAGGAGCCCCGGTAGTAATGGGATGGCGCACAGGCTAGAT
GTACATTTCATAACACGCATTTCTTTTAATTTTTTTTGGCAATAATGTCC
TTCAGCATGTCCAGACAACAGGAGTTAATCTGTGGCCTCTCGCGCGTGGT
GACCATAGCAGTCCTTCCCAGACTGAACATGGAGGAGCTGATATTTGAAC
TCAACAGGAGGATTCAAAACCTGGACAAAGAAAACAGCATCAAAGACAGG
ATGGTCGGTATTCTTAGGGACGTGATGTTGGAGGAATACAGTCAGTTGAA
AAGAAGGTCGATATCAGAAGGAGGATGTCTATATCAATCAATCGTGTCTG
GACAAACGCATGAGACAGTAACCACGCAAGAGAACATTCCGACCGCGTAC
GCGGAAACAATGTCAACAAAGACCTCAAGTCCTGACGCCTCACTGCAAAA
TTCTGGACTGGACTTTATCATAAAGAAGGAAAACAATAATACTAGCAGTG
AAGTACTCACACATACAAGGGAACTCGGGCTTGATACAGACCAAATACAG
TTGACTGGTCCAGAACAAGAGCAACTTTCTAGCATTCCCAGACCAAGTTC
TGCAGCACTTCCTTCAACCGATACCACCATGACACAAATGAATACCTCAA
TAGACTCTCGCATTAAAGAAGAAGACTTTTCTATGAACACTGAGGATGAA
GCAGCTAGAGCTTGTCATGATGTCTTCAGCACTGACACTACTGCTTTTAG
TATGCAGGTGCAAGATACAATTAACCCAATGAGTACCTCTGGCACAGAGA
AACCTGTGAACAAAAAGTCAAAGGAAACATCTTTGGCTTCTTGTCAACCG
ACCGCTGGCCATAGTGATGTACGTACGTGGGAATGCCATACACACGGAGA
TGATCCAATCGGGCAGATTTCTAAGATGTCTTACTCGGATTATTCTCAAC
GTTACACTGACGACTTAGAGCCTGGTTCCATCATCATTGGGCATGAACAA
AGGTCCTGGGAACCGTACAGTTGTGAGGTTTGTGATTACAAGACCTACCG
AAAGCGCGGCTTTAGCGCTCATATGAAATGTCACACTGGTGTGAAATCTC
ACAGGTGTGAGATTTGTGACTACAGAACAACGCACCGGCCAACTCTTGCT
AGACACATGGAGTTGCACACTGGTGCGAGACCCTACAGTTGTGAAGAGTG
TGACTACAAGGCAGCACAAAAGGGGACCCTTCGTCGGCATATGAGACGGC
ACCAACGAGATCACCGTTAGTCATCCACCAACGGAAATGACTTGGGACTA
GTTCCATTTGCAGGGAATTGACTCGATTACTTCTTTAGTCGCTCGGCTGC
GGCAGTTAAAACGAAAAAGACGGTATTTAGATAAAGACGTTCTTGAAAGC
ATCGAACACTCAACTAAGCACTTGCAAAGATGGTTTTTAATCAGGGAGAT
TTTGTTTACCGGACAAAATATAAACGGGATTGAAAGAGCCGCGTCAGATA
TGGCCGACACTGTTGAGAGAAACCCTACAAGTGCACGTGTCAGGATGACA
GGGGCGATAAGCTCAGACAGTTCACATGATGCGTCATGGGGGACGGAAAC
ATTGCTCGTGTAGCTAGTGTTCTTTCAAGCCAGCACATAAAGTGAATTAT
GTTAACAGAGTAGGAAATGTACAGGCGAGAAACCATTTATATGCGGCGAT
CCTGGCTTTAGTCAGCTTAGAACATGATAACAGACGACCAACAAAGTGCA
AAATACAAAATAAAATGAGCGACATTTGTGCTGATGACGGATGCAAATTC
AAAGCAGTATATTGCACAATGTACCAAATGAGTTCAACATAGAAGCTGTG
TTATGAAATGGTGACGTGATAGACGATATATGTGTCAGTGGTGATTAGCT
AGAAGAATTAAACCTGTGATCATGCTGTCTACTCTCCAAGCAAAGGTTGG
GGTTTGTCTTGTTTTTGACGTCTTTTTAAGCGATTTTGACGGTTTGTTTT
TGGTTTAGGCGGCCGACAGAAACCGTGACAAAATAGCCCGACATGAACGC
TTAGAAAGACACCAAAAACAAGACAAAACCCAACCTCTGTTTGGAGAGTA
TTTGCTGTCAACAAGGGACACACAGTCCCGTTATCGAAGTGACAAAATTC
ACCGTCACAACGCCTGTGTAGATAGAATGAAGATAGGAAATTGTCAGAAT
TCGAGCTTTAAAGATTGTATTTCTGCATTGGTTTCCAGCGATGTTCCGTA
GTTTGTATCTTCATGGTTTCATACCTATTGACGGTAATAAAGCTGAACAT
TGGCAGTTGTATAAATCATTTGTCAAGAAAAAGCAACTAGGCCCAAATAG
CCTATATGAATTAGATTGAGAAGGTAATACATTTTCAAACGGAAATAAGG
TCGGAATGATTTTTTCTTGCACAAAAGGGTATTCTATGAGAAGATTAATA
GGATAAGGAGGTGAATATTATAGAACTGTGATACTTTTCCAGCTTTATAT
GCTGATACTAGTTGGGTAATCTGACCTAGAATTACCTTTGACCTGAATAT
TTGTTTTCCTGTCAGCCATTTTTTGTTAAAATCGCTTCACGATATACTTG
AGAGATATCGCACAGGGAAGACAGCAATCTTACCTACCTACAGCGCCGGT
GTGGATAGAAACCAGGTAAGGGATATTTGTAGTGATTTTCTTTTCCTTTG
GCTAAACTAGTTACGTAAACAGTCTTCAAAATGTGGTATTTCTGCTTCAG
TGTACGCTAAACAGTATTATGTGGGGAGGGGGTGACGTCGACCCAGTCTC
TAGCAGACTAATTAATTACTACGCCGGCTATAGGGAAATATTTTCCAGGG
AGGTTTGGTCACCATAGGGACTTTCATTCGCAGACGTAGCTACGGGGAAA
ATATGATTTACCGTGAGCCGACTCTACTGGCTTTTTTTGTCGAATTTTAC
TATCCATAAAGGAGGCTAGGAGTTACCCACTGTAATAGGACAAAACAATT
TATGGTAGATTTATTCATAGCTCACTTTTTAAAAATCTTTTATCAAGACC
AACAATCGTATAGATNCAATTTTATAGATGTATAATGTAACATTACCATA
AACTTGATTGCCAGGGAAGCGTCGGCTATAGCAATATTAGCAGAAGAATA
ATTAATATAACATTTCACATTCCAAAAATGCATTAGACTTCCACTGCTTT
CATATACATTATATGACAGATTCAATCTGATGTAGATTTTGTAAAGATTT
TCCCAATGACGCAAAAGCAAAAGGAAACCATTGATTATGCAAGGTAGTAG
GTTTCCATTACTATTGTATTAGGTTAGTCTGATTGAATCGCGCTAATTGC
GGCCGTCCAACACCGGTCAGCCCCTCTGCGGACTGCGGGGAGGGGCTATT
ACAGCCTCGGATAGCGAAGTTTCCGTCACACAGACTATTGTACGTAAGGT
ATACATTTCTTAACACGTATTTCATCTATCCAATTGTCCTTCAGTATGTC
CAAACAACAGGGGTTAATAAGTGGACTATCGCGCGAGGTGACCATAGCAG
TCCTCCCCAGACTTAACATGGAGGAGCTGATATTTGAACTCAACAGAAGG
ATTCAAAACCTGGACAAAGAGAACAGCATCAAGGACAGGTTGGTCAGTAT
CCTTAGGGACGTGATGTTGGAGGAATACCGTCAGTTGGAAAGGAAGTCAG
AAGTCGGTTCTCCAGACGAAACGAACATACCTGAACAAGAACAGGACTCA
GTTACCATGCAAGACAACGTTTCCACCGTGAACGCTGAAGCAATGTCAAC
AAAGGCTTCAAGTCCCGACACCTTACTGCAAAGCTCTGGACTGGGCATTG
CAAGTGCGGTAAACAAGAAAAACAACGAATCATGCAGTGAAGTGCTGATG
CAGACTAAGGAACATGATGTTAATAGAAACCGAAAACACCTGACTGCTAC
AGAGCAAAAGCAACTTTGTAATATTCCCAGTCCGGGTTCGGCAAAACTTC
CGTTACCCGATACCTCAATGACACAGATTAATACCTCCGAAGACTCTCAC
ATTAAAGATGAAGACATTGCCATGACGACTAGGGATGAAACAGCTAGAGT
TTGTCATGATGAACTCAACATTGACACTCCTACTTTCAGTATTCGGGTGC
TAGGTACAATTAAACCAGTGAGTCATTCTGGCACAGCGAAGCCTTTCGGA
GGAGACAAAACCCGTGAGGAAAAACCTTCCGCTTCTCGTGAAAAGACTCC
AGACGTACGTAAGTGGGAATGCGATGTGTCAGAGATTAATAAAATCGGAC
AAGTGTCTCAACCTTCCAACCTGGATGATGCTGACAACAGAGATACAGCA
GTTTCCATCGACATCGGCCATAAACAAAATAATGTCAAAAGTGACCAACC
CGGCGATTTCCCGGCTTGCGAGAACATTTCCTCCATTGTTCTCGACAATG
CCATTCCAAAAGATTTCAAACCCTACATGTGTAGCGTGTGCGGATTAAGA
ACAATGTACCGGAGCAATCTGTCCAGACACATGCAAAAGCACACGGGAGG
AAAGCTTTTCATGTGCGGCGAATGTGGTTACAGGGCATACCATAAGTTCC
GGCTTGTCGAACACATGAGAACACACACGGGCGAGAAACCGTTCAAGTGC
GATCAATGCGACTTCAAAACGGCACACAAAAGTGACCTTGTCATTCATTT
GAAAAAGCATGCAGGCCAGGAACCTTACAGCTGTAAAATTTGTGACTACA
AGACCTACCGGAAGCCAGACGTTAAAAAACATATGAAGTGTCACGCTGAT
GTGAGACCGCAGAAACATAAAAAATGTGGCAGCTCACAAGCTCGTTCTAA
CTCCACATAGGAGGCGACACACCGGTGAGAGACCCTACAGTCGCCAATAG
TGTGACTACAAGGCAAGTGAAAAGGGCAGCCTCAAGGATTTGAGAAACAA
GCACCAATGAATATTACCTCTAGCTCCGTTATACATATTCATATTGTCGA
CTCGGCTACTGTGTTTAAGTTATTGATTGTATTTTTGTTAGTGGCACCGC
TAAAATAAGCCCTATTATATATAAAGCTTGATTGAGCACGGCACCACTGA
GTATGTATTTTGTACTTGTATTTGTTTTTCGCATTAAAAAGAAAACGAGC
ACCCATGAAAATAATGTTAATCACCAACCCCTAAAAAAACTAGTAGACAT
TTATTTCTTGCAGCAACTATTGATGAGAAACTAAATGTGCACTCGCCCAA
GATTCAAGACTACTAGTACTCTGTAAAGTAGAAAGTACGTTTCAATACAA
TGTTTATTGAGTTGAGTTGTAATAATGTAAGTATGTGCCTGTGTACAAGC
ACATCAGTGTAAATAATGCAATAGACGACATATATTCTTGTATTGATTTC
TAGAAATGTTGCATTCTTTATGTGTACGTGGCGCTTTGCTTATCAACAGC
AATAAGCTGAATATTTTGTCCTTATGTGCCAATATAGAAGAGTCAGACTA
CAGCNTGCCAATATAGAAGAGTCAGGCTACAACTTGGTCAGTCTGTCGGT
ATAACACAACCTCTATTGAGTAACTATTTATTGATATAACTGCCTGTTTT
TCAAGCGTAACGTGATAGTGAGAAAGATTGATATAATAGCACGGATTCTT
AGTTCGATTCCAATGATTTCGCACAAAGATAATGTCTGTATGTATTTACA
GAAAAGTGAAAGTCGGCACAACAATGTAAACACTCATTGACTCTAGATTA
CACATGTATTTGGCATGTTGTATTCATTGTGTATTGATTTGTTGTGATAT
CAGACTTTGTATCTGTGGGTGTCTTTCCTTGCCAACAGCAATAAAGATTC
AAAGATTGTACGGCTGTGTCAATATATCAAGAATAATGCAACTTGCCATT
TGTATAGTATGAAAGCCTAACACAAACTATAACTGTCTATGTCTCTATGG
AGCCCCTCGCAGATCAGTATTTAGCTATTCAACTTTGAGCCCAGAGTTTT
GAAAAAAGACAAGTGCCAATAGGAGCTCAGGATTCTTTGTAACTATACAT
ATCCGTCCAATAGGAGATCAGCTTTTCTGTCACCATGGAAACCTGTAATC
ACAGCCTCGAACACTACGGCAGGAGGCAGTTTTAACATGGAAATCTTTAT
TGACACAACAAAAGTACAGCGACTTTCGTAAGGTCTACTACATATACATA
CAGACAAGTGGATACAAATGAATTGACCTATACATAGATGTATATGAATA
GATATGAGTAAATCAACATGTTGAGACCAACGTATCAATTTATTCTGTAT
TAAAAATCTGGAAGGTTCGGAGAAACAAATTGTGAAAAAGTCCGTCCATG
TCATCTGGTTTAAGCATTTCGCGAAAAAGAAATATGGGAGGAAAAATAAT
TGATACCCTTCGTGCCTCTCGTTCTTTGGAAATAGCTGTCAACCTTCATT
ATTCTATTTAAACCCTTACAATGTCGTCCTTCTGCATGCCGACATCACGA
TTCTGTAGTAGTTGGGTAATCAGTGGTTCTGACCCTCCTTGACCTTTCAA
CTTGAATAGATTTTCTGGGTCAGCCATATTTGTTCGAATTTTTCCCCGGA
CGTCTTGGCTCTTCAGGGAAGAAATACTTTTACCCATCTTCCCTCCTACG
GTTTGGCTCTCCAAAGCAGGTAGGAAGAACAATATCAAGCGAACACTGAC
TTCAAAATGTGGCATTCTTTGCAATAGATATTAGGTCTTGGACAAGTTGG
AGGGTTAACGCTAATGTGGGGAGGGGGGCGACATTCTACATACAGAGAAC
AAAACACGCATTCTTGTCGTATTTTGAGAGCGCCTTTAATACATCGAACT
TGAAGTTTTGCGTACGATAGTGTGAAAGGGGAGCATCAGGTATAGCGGTT
TTAGCAGAACAACAGCATCGTCCATAATTTCCAACAAGGTATTTGACTTT
TATATCCTGGGTATACCGTAAGCTAATATATACTNTATTATCACATAGTT
AGATAGCGTCAACCAATCAGAAGCCTCCATTTCCTTCGGTTATGACGCCA
TAATGCAATAAAAGTCCCATAAGTGGTGTTCAATCAGTCATGGGTGGTGT
TCAATGATTTTGACCAATCAGAGGGAGCTATGGTAGTGACTAAGTGGTGT
TCAATAATATTGACCAATCAGAAGGACACCCAGAAGGGAGGAATGATTAT
CATCATTAATCCTCCCTTCTGGGTGTCCTACAGAGTATAGTAGAGTAGAT
TTGAAAACACGATTTGTATGCAAAGATTGTAATGTTGTGAAAGATTTTCT
GTGGAAGTTTTAGTTTCAAAATGAAATCTGTAATACAGTACTCTGCACAG
AAATGACAAATGTAAATTTTCACATGCATTTCTCAAATTGGACTGATGCA
TTAACATGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCGAAACCTCTGCTTGGAGAATATTTATAACGTACATCTCATAT
TCAAGACATGTATTTCATATTAGATACTGTTTTTCAGCATGTCCGGGCAA
CAGGAGTTAATCTGTGGCCTCTCGCGCGTGGTGACCATAGCAGTCCTCCC
CAGACTGAACATGGAGGAGCTGATATTTGAACTCAACAGGAGGATACAAA
ACCTGGACAAAGAGAACAGCATTAAGGAGAAGTTTGTCAGCATCCTTAGG
GACGTGATGTTGGAGGAATACCGTCAGTTTAAAGTCAGTTCTCCCAATGA
AATGAACATCCCTGTGCAAGAACAGGAGACAGTTACCATGCAAGAGGACG
TTTCAACTTTGTACACTGATACAATGCCTTCAACTCCTGCCATTCCTACT
TTCAATAAACAGTTGCTAGATGATTCAAGGAGTACTTCGTGCACAGAGAA
GACTTCAGAAGGAGATGAACCCTGTGAAGAAACACCGACTCCGGACCATG
GTGACGCACATATAAAGATGGAATGCCACATGTTCGAGGACAATCAAATC
AGGCAAATTTCTGAACAGTCCAATCTGGAGCATCTTGAACATCTTACTGA
CGACAGAGAGACAGGTTTCATTGACAGCGGACACGAACAAGTTGAAAAGG
TGAGAAGTGAGGAAACACCCCTGGCTCCTTATCAACCGATTCAAGACCAG
GACTGTGACGAAATGGCGTCCCTCCTTCCTGACCATGACTCTCAAATCAA
TTCAGATGACAAACGCTATTTGTGTGACGTGTGCGGATTCAAAACATCGC
ATGCAGACAGTCTCTCCAAGCATAGGCAACGTCACACGGGAGACAAACCT
TTGATGTGTGGTGAATGTGGTTACAGGGCATACCACAATTGCCGGCTTGT
CGAACACATGAGAACACACACTGGCGAGAAGCCGTTTAAGTGTAACCTGT
GTGACTTCAAGGCAGCATGTAAAAATGGCGTAGCCAACCATATGAAAAGA
CACATGAACGCGGAAAACACGGATGTGGAACCGTATACCTGTGGGATATG
TGCCTACCAGACCTACCGAAGGGCAGATATGAAACGCCATATGAAAGGCC
ACTCTGGTGTAAAACCGCTGAAATGTGAGGAATGTGACTACAGCACAGCT
TACAAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCGAAACCTCTGCTTGGAGAATATTTATAACGTACATCTC
ATATTCAAGACATGTATTTCATATTAGATACTGTTTTTCAGCATGTCCGG
GCAACAGGAGTTAATCTGTGGCCTCTCGCGCGTGGTGACCATAGCAGTCC
TCCCCAGACTGAACATGGAGGAGCTGATATTTGAACTCAACAGGAGGATA
CAAAACCTGGACAAAGAGAACAGCATTAAGGAGAAGTTTGTCAGCATCCT
TAGGGACGTGATGTTGGAGGAATACCGTCAGTTTAAAGTCAGTTCTCCCA
ATGAAATGAACATCCCTGTGCAAGAACAGGAGACAGTTACCATGCAAGAG
GACGTTTCAACTTTGTACACTGATACAATGCCTTCAACTCCTGCCATTCC
TACTTTCAATAAACAGTTGCTAGATGATTCAAGGAGTACTTCGTGCACAG
AGAAGACTTCAGAAGGAGATGAACCCTGTGAAGAAACACCGACTCCGGAC
CATGGTGACGCACATATAA Coding sequence (CDS) from alignment at Sc0000003:5938765..5948683+ >Blg00846.0 ID=Blg00846.0|Name=Blg00846.0|organism=Branchiostoma lanceolatum|type=CDS|length=474bp|location=Sequence derived from alignment at Sc0000003:5938765..5948683+ (Branchiostoma lanceolatum)
ATGTCCGGGCAACAGGAGTTAATCTGTGGCCTCTCGCGCGTGGTGACCAT
AGCAGTCCTCCCCAGACTGAACATGGAGGAGCTGATATTTGAACTCAACA
GGAGGATACAAAACCTGGACAAAGAGAACAGCATTAAGGAGAAGTTTGTC
AGCATCCTTAGGGACGTGATGTTGGAGGAATACCGTCAGTTTAAAATACT
GTTTTTCAGCATGTCCGGGCAACAGGAGTTAATCTGTGGCCTCTCGCGCG
TGGTGACCATAGCAGTCCTCCCCAGACTGAACATGGAGGAGCTGATATTT
GAACTCAACAGGAGGATACAAAACCTGGACAAAGAGAACAGCATTAAGGA
GAAGTTTGTCAGCATCCTTAGGGACGTGATGTTGGAGGAATACCGTCAGT
TTAAAAGAAGACTTCAGAAGGAGATGAACCCTGTGAAGAAACACCGACTC
CGGACCATGGTGACGCACATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00846.0-exon-Sc0000003-1570713199:5938765..5938980 | Blg00846.0-exon-Sc0000003-1570713199:5938765..5938980 | Branchiostoma lanceolatum | exon |
| Blg00846.0-exon-Sc0000003-1570713199:5946902..5947097 | Blg00846.0-exon-Sc0000003-1570713199:5946902..5947097 | Branchiostoma lanceolatum | exon |
| Blg00846.0-exon-Sc0000003-1570713199:5948242..5948451 | Blg00846.0-exon-Sc0000003-1570713199:5948242..5948451 | Branchiostoma lanceolatum | exon |
| Blg00846.0-exon-Sc0000003-1570713199:5948615..5948683 | Blg00846.0-exon-Sc0000003-1570713199:5948615..5948683 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5938765..5948683 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00846 |
|
