Blg00722.0 (mRNA) - B. lanceolatum

Overview
NameBlg00722.0
Unique NameBlg00722.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:6310413..6312539+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00722.0 ID=Blg00722.0|Name=Blg00722.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2127bp|location=Sequence derived from alignment at Sc0000003:6310413..6312539+ (Branchiostoma lanceolatum)
ATGGAGCACTTGGCCAGGTACGTATTACTAAGCAGTCCTTGTTTGATTAC TGTTTGTCGTGTTTAAAACGTTTACTGTGTTACTGTGATGGAATCATGAA CTTTTGTGCATATGAGTTTGACTGTGTTTTCTGGTTATCAACAATGAAGA AAGCTCTGAACAATATGTAGGTATATTTTTCGATGGAGACTTCTCTTCAA CACACTATAGCATTCTTGTTCGACAATTGTATCAGCCAAAAGGTATGGTC CTTACTAGTAGCAACATTTATAGGAAACTAATCTACTCCACACAAAACCA TGCAGTATGGGATAAGACTAAGTACTTTTGTTGGATGCCTAAGAAAACAA CAGAAAATGATGCCGAAAGTCAAGCATTCAAATTACTGTTGTAGTGTAAA GACATATTTTGCGCACTTTACAGGTCGACTCACGTGAGTAAACTCGTGAG CAGTTTCGAGGCCCTGGCCAGCCGGCCGCGGCATGACTACACTGCAGCCG CAGGCATGACACCCTTCCTGACAATGCCTGATGACAGTGACCAAGTCTTG ATCAGGTACTTACGTTCACAAACAAAGTTATGTTTTCTGTGTGTTTGTCT GTACTGTGTTTTTGTTAATGGGCATCAAACTTCGAGGAGCTATGGTTGTA TTTGTAAGATATTTGGTATGTGGATGAGTTTTGCCCAAATAAAGCTTTGA TCATGGCCCCCCTAACGGTTTTCCGTAGTACCGATGCTGTGAGTTTATGT AACTTGAAGGACAAATTATCTCATACCTGCACAAAAGAGACAGGTTCGAA AAGAAAATTATATTTTCGGTGCCATTTGTGGTTTTGTCTCAAGCGTGGTT TGTGAACATCGTAGCTAGAGAAGTTATGAAAGAATCCCTAAGATATTTGA TATGTGAGTAGGGGTCATTAAAAGGAATGAAAACTTACCTTTGTTCATGA GCCTCCTATCGGCTTTCTATGGTAGGATGTTTTCGGCTTATGTTACCTAC AAGATTTGAGCATCTTATCCATCATTAGTCGTCCTCTCGTTAGAATAGAA GCAAGTATGATTGCGTCCACAAGGACAATGTGTGATTTTGATCTTCCTTT TTCTAGACACAGGCGTTCAGTTCAGGAGATCAAGGACGAGCTGGTGGGAA AGGCAAGCTCCACTTCGTCAGAAGCTAGTGTCGTGAACGTCACACCCCAG ACGCCGCCAAGTGCCAAGCTTCTGCGTGAGGCTACCCCCAAGTCGGCGGG TACCACGGAACAACAGAAACCTCTCCCCTCCCAGTCCCTGGCTGACACAG CCGCCCAGACATCAGAACCAGATACCAAGACGGTGTCTAGCGACACTACT GGTACGACGACGGATGGTGTGAAGCCGAAGGATCTTCTTCGCACCCTGGT TGTTCTTGGTGACGCGGCTGGCGAGACGACGGTTATGATGAAGACATCCT GTACCCAGTCTGTGGTCAGCAAGGATGACCAGACGACCCTTGCCGTGAGG CAAGACGAGCTACTCCGCACCCTTCTCTTGGGTCTGCCAGACGCAACTGC CGAGACGACCATCACAGTGTCGCCACGGAAACCAGTTCACGCGCAGTCTC TGGCTGACACAGATGCCAAGACGGCCGGTCCCGTGAAGGAACCAGCCTCC ACCCCATCTCTGACCGTCGCAACCGCGAGGGTAACGGAAAGCGCTCCCGT CCTTCAGCCGCCACAGAAGCCCTACCTGTGCGAAGACTATGTCTTTCAAA GGGGCGACTTGGGCCACTTCGGGTTCTCCGTCCTCACAACGATGACTCCC GACATGGAACGAGTGCACGTGGTATTCCAAGCTGCCGACAGCACTGCCCG TCTACCGGTTGGCCTGCTCGTCTCCGCAAACTTAATTTCCGTGAAGAACA TGACGGCCTCTGAGCTGCAGTACATATTTGACCGATGCACCGAGTCCGTC CTGCTGAGGGTTCAGCAGCTGTCATTTCCGCTTGCCGTGCTCCAGGAAAT GGTCGCCGATCAAACCTACCGCAGGCAGCGACGGGCTCACCCTGCAAAGA TGTGGGTGAAGAGGAAGCTGACAGGGATGGCCAGGGCACTCTCCCGAGTC CGCGATGCCATCACGTTCTGCAGATGA

Coding sequence (CDS) from alignment at Sc0000003:6310413..6312539+

>Blg00722.0 ID=Blg00722.0|Name=Blg00722.0|organism=Branchiostoma lanceolatum|type=CDS|length=1170bp|location=Sequence derived from alignment at Sc0000003:6310413..6312539+ (Branchiostoma lanceolatum)
ATGGAGCACTTGGCCAGGTCGACTCACGTGAGTAAACTCGTGAGCAGTTT
CGAGGCCCTGGCCAGCCGGCCGCGGCATGACTACACTGCAGCCGCAGGCA
TGACACCCTTCCTGACAATGCCTGATGACAGTGACCAAGTCTTGATCAGA
CACAGGCGTTCAGTTCAGGAGATCAAGGACGAGCTGGTGGGAAAGGCAAG
CTCCACTTCGTCAGAAGCTAGTGTCGTGAACGTCACACCCCAGACGCCGC
CAAGTGCCAAGCTTCTGCGTGAGGCTACCCCCAAGTCGGCGGGTACCACG
GAACAACAGAAACCTCTCCCCTCCCAGTCCCTGGCTGACACAGCCGCCCA
GACATCAGAACCAGATACCAAGACGGTGTCTAGCGACACTACTGGTACGA
CGACGGATGGTGTGAAGCCGAAGGATCTTCTTCGCACCCTGGTTGTTCTT
GGTGACGCGGCTGGCGAGACGACGGTTATGATGAAGACATCCTGTACCCA
GTCTGTGGTCAGCAAGGATGACCAGACGACCCTTGCCGTGAGGCAAGACG
AGCTACTCCGCACCCTTCTCTTGGGTCTGCCAGACGCAACTGCCGAGACG
ACCATCACAGTGTCGCCACGGAAACCAGTTCACGCGCAGTCTCTGGCTGA
CACAGATGCCAAGACGGCCGGTCCCGTGAAGGAACCAGCCTCCACCCCAT
CTCTGACCGTCGCAACCGCGAGGGTAACGGAAAGCGCTCCCGTCCTTCAG
CCGCCACAGAAGCCCTACCTGTGCGAAGACTATGTCTTTCAAAGGGGCGA
CTTGGGCCACTTCGGGTTCTCCGTCCTCACAACGATGACTCCCGACATGG
AACGAGTGCACGTGGTATTCCAAGCTGCCGACAGCACTGCCCGTCTACCG
GTTGGCCTGCTCGTCTCCGCAAACTTAATTTCCGTGAAGAACATGACGGC
CTCTGAGCTGCAGTACATATTTGACCGATGCACCGAGTCCGTCCTGCTGA
GGGTTCAGCAGCTGTCATTTCCGCTTGCCGTGCTCCAGGAAATGGTCGCC
GATCAAACCTACCGCAGGCAGCGACGGGCTCACCCTGCAAAGATGTGGGT
GAAGAGGAAGCTGACAGGGATGGCCAGGGCACTCTCCCGAGTCCGCGATG
CCATCACGTTCTGCAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00722.0Blg00722.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00722.0-exon-Sc0000003-1570713199:6310413..6310429Blg00722.0-exon-Sc0000003-1570713199:6310413..6310429Branchiostoma lanceolatumexon
Blg00722.0-exon-Sc0000003-1570713199:6310836..6310967Blg00722.0-exon-Sc0000003-1570713199:6310836..6310967Branchiostoma lanceolatumexon
Blg00722.0-exon-Sc0000003-1570713199:6311519..6312539Blg00722.0-exon-Sc0000003-1570713199:6311519..6312539Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:6310413..6312539 +
Properties
Property NameValue
GeneIDBlg00722