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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:621426..628154- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00711.3 ID=Blg00711.3|Name=Blg00711.3|organism=Branchiostoma lanceolatum|type=mRNA|length=6729bp|location=Sequence derived from alignment at Sc0000003:621426..628154- (Branchiostoma lanceolatum)
GGTCACTCTATACCCTGCCCTTTTGTTCACCAGTAGCGCTTGCATCACGA
GCGAATGAATCATCAAGGTCAATGACCCCACCATATGCCACGACAGACTA
CAGGCATTCTCGTGCCTTTCTTTAAGCTGTACTGTCCTCACTGCGTGTTT
CTCTGAATCGTACACGTCTTATAAATCGTCTTGGAACCGTCTTACGCCGA
GTAAAGGAGCCTTATACATGACCTTCTCAGATCTTCTCAGGTTACATCGC
GTGAAAAGCCGGACTTGTGGCATTTACCTGTGTGGCAGGTAAACAACACC
TGCACAAAGGTAACCACGCAGGTGTGTTCAGGTGTGACGGGCGCAGCCTC
GACCGTACCTGTCTCGAAGCAGGTGAGACACTGAGACAGCGGACACTCTT
TAAGGACCACCTTTGGATTCTTGATAAGAAGATCCAGGTCTATCTGTAAG
TGTCCATCCTTCTCGTTTTCGTGCCTGAGTTTCTAGCAGACTAACAACGC
GGGGCGGGTCGCTGGCTGTTATGGAGCTCGGAGAATAATTGGCCAGGGGA
GTTGGCCACCCGACAGAGAGGAGGGGAAATGCTAACCACCCCGTGGACTA
ACTCTCTGGCAAATCATTCCCTTTTATGCCGGAATCTACGATCCGTACCC
CCTTAAGAAGGCATAATGGTGGCTACATTAGTCACGCCCCATGCGCTTGT
ACAGGGTGTGGATAGACAAGGACCGGGGGAGGGGGGCACGTCTGGCTTGG
GCTAGTCAAATATTAGATCTCGGTCACGTCCATAGGAGGTGAGACTAGAC
AGCTGGAGCTTCTTAATGATCACCTTAGGATTCACAAGGAGACCCACGTC
TCTCTGTCTGTGTCCTCCCTTCTTTTATTTTAGTTACACCCCCTGCGACC
ACTCTAGACGTACAGCGATAGGGGAGGGGCATGTCTGGTTTGGGCTTGTC
AAATGTTGATTTTAAAGTGCGTTCTCATTCTTGGCACGATTTGATTTTGT
TGTTGAGATTTTTAGCGAAGCTACGGCAGAACCAACCCTACGGATCTGCG
ACGACCCGTTTCGTCAAACGACAGCTGGGTTTTGTACGGCATATATCCAC
GACTGCCCTAAGAATGCCCTATGTTTACCCTAAACATATCGTAGGAAGAG
CCCCTAACATGAGCAATAGTGTACCCGTGACCTGTAAAGATTACATTGGA
GGGACCACACTTGTCTTTTCGTAACCTTTCACAATATCTTGCGTTTATAC
CCCGTTTCTATATACAGTTCTTACATTCATGGATATCGAGGGTCTTGCTA
TCAAATTCTAGCCTTTGTTTATATTGCATGCGGCTCAGTGCGTCACGAGT
GATGTTAGTTATGTAGCTTATGAATATTTCATCGCACAGCTCTTTGGGCT
GGATAATGTTACATGTAAGGCAATGTTAATTTGATTATATGGATGACATC
CAGACGCGCATCGATTTTACTCCGTTTCCACACAAAAAAAAAGTTTTCAA
CTATACTGTAAATCACAATCACAGTAGATTATAAGATACAGTATATATTG
CAAAACGATGCCAATTTCGTACAATGACAAAATCATTTCCAAAGTCAAAG
AAGAAGATGTGAAGAAGTGAAAATGAAGAATCCATTATTCGCTATACCAT
ACTCTGTGTATTAGTCATTTGTTGAACCTTCCTGACCACGTTAATGCTAG
CCTGGAATCCATCCTATTTAGCTTCCGGCCGCTACCCTAGCTCCGCTGCG
CTACCCAAGCTCTGCGGAGCTTGGGTAGCGCAGCGGAGCTAGGGTAGCGG
CCGGAAGCTAAATAGGATGGATTCCAGGCTACGTTAATGTCACAATTACG
GCAATTTGTTATTGCCAACCTTTTTATCAATCCCACGCTCGCATCAGTGG
CTCCCATAGGATTCCATCCATATAATCAAATCAACGTGGCCTAAACTCAA
GGTATCCTGTTTCCCCAAGCGAGATATATTTCTGTACTTAAAGTATGTAA
ATACAGTTAAGGCATATTAGTAATTGGAAATACAGCATAGTAATAATTGC
AATTGCCCATCAATGTTGTTTACAAGTAATGTTACCAACAATGCACATCA
ACATGATTGCTCATACGGTGATGAAGGTTTGAGATCCAGATTAAAATTAG
ATACATTCCTGTATTGTGAACATGTGTTGCTGTTTATAGCAATGAATCTC
CTTTTTATTGTACAGGCAACATGGCCGCTCTTGTGAAGAGGGTTCTTGTT
CTTGTACTGATCGTCCTGGCAGAATCCGGCCCGACCCGGCCTGTGCAGAC
AGGTGTGATGACTACTCGTGTCCCTGTAACTTTTCTATTATCATGTACCG
TTGCTTACAGGAATGTATCTACTCTTATTGGTACAGGCAACATGGCTTTC
CGTGCGAAGAGGGTGCTGGTCCTTCTACTGATCGTCCTGAAGGAATCTGG
ACCAGCCACTGCCTGTGGAGACAGATGCACGGTTCCTTATAACAATGTAT
CTCCTTTCTACAGCGGCAAGCTATGATGATGATGATCTCCTTTCTATTGT
ACAGGAAACATGTTCTCCGGGACAAAGAGCTTGCTGCTTTTTGCGCTGAT
CGTCCTGAAGGAATCCGGACCGGCAGCGGCCTGTGCAGACAGGTGCGATG
ACTACTCGTGTCCGTGCTCCGGGCTGGTGTGCGGTTCCTTATAACAATCC
TCATAACATTGTGTCTCATTTCTATTGTACAGGAAACATGTTCTCCGGGA
CGAAGAGCTTGCTGGTTTTTGCACTGATCGTCCTGAAGAAGTCCGGACCA
GCCGATGCCTGTGCTGCCAGGTGCGATGACTACTCCTGCCCCTGTTCCGG
GCTGGGGTTCAGCAGAGTCCCTATACCTTTTCATCTATTCTGAATGTTGC
TAATAGTTATGTATGTCCTTCCTGTTGTACAGCGGACAGCATGGCCGTCC
AAATGAAGAGGTTGCTGGTTCTGGCACTGCTACTGCTGAAGGAATCCGGA
CCGGCCGCGGCCTGTGCTGACAGGTGCGATGACTACGCGTGTCCGTGCTC
CGGGCTGGGTTTCAGCAGAGTTCCGCAGTTCCTCCCGACTCACGTCGCTC
GGCTGGACCTGACCAGTAATGCCATCACGACAGTAAACCCGCCCGACTTC
GCAAGGTACTGCAGCATGTAGCCTATTCCTAAACTCAGGCACAAACCCTC
TGGGTGGTAGACGGTTTTCTTTAGTTTTAGATATGGACTTTTGCTATGGT
GAATACTGTTCAAGTCTATTTGTTTGCTTAGCAATGTTATTCGTAAACGT
AATCATTGTATGAGTAGCGTTATATCTAATAACCGAACAAGCACAGTTGT
GAGTGTTTGGTATACCAACAGGATTGCTAAGTTTTCTAATAACATTGCAT
CGTACTTAGGTACGCCTGTTCCCTATGGTAATAGATAAAGCAGGAAATGT
TTATGCAATTTTGACACCCTAGTTCAAGTGACAGCACCTCACATACTACA
GATGAGTAGAGAGAGGGAAGCAGGAATTTATAGATGTGTCTACAAAGCTT
TTGTTAAATGGCGATTCCAGGTACACTTAGACATCCCTATCCCCGATGGT
TTTAGTAGAATAAGGCAGATATTTGTCAATAGATTTTTGTTTTCTTGGAT
GTTGATTCTAGGTAGACCAGTCAAATACATTCAGACACTAATGCCCATGA
TAGTTGTACAAGAATAAGGCAGGAATTTCTCTATACGATTCTTCCTTTAT
TGGATGCTGATTCCAGGTACTACAACCTGCAAGCGCTAGACCTCCGGACC
AACCACATCTCAACAGTCAACAGCCGAGCGTTCTACAACCTCAGCAGCCT
CACAGCGCTGCACCTGGCCGCCAACCGGCTAGCCAGCCTCCGAGCCGACA
TGTTTATTGGCCTGGACAGTCTGGAGTACATGGATCTGCGCTTCAACAGC
ATCCAGAACGTGGAGTGTCCAACCTTCAACAACACTCCGCTGCTGAATAC
TCTCATGTTCTCCAACAACAGGATCGTCAGCGTTCCAGCGGACATGTTTG
GACTGGATATGTCTGTTCTGCAGGTACGGGATATTTTTTTATTTCATTTT
AATATCTTTATTCAAACATACATCAATACATAGCACATTAACACATATTT
GCAATTTCACAAATATGCACAGTTACATTCTGAATCAAAGTTGTAATTGC
CAACGCAAAAATTGGACTTACCCAAACTTTCGACTTTGACTCAGAATGAC
TTCTACCAACACAGATGAACTTTCAAGAGAATACACAGTTACATATTCTT
ACAGGGGTCATTCCCACTGGCTTTTTTCATCCCCCCCCCCTTCCAGGTAC
TGGATCTGTCGTACAACCAAATCAACGCCTTTCCCGTCGAGGGTTTTGGA
AATCTTAGCATTTCAGCGCTATCAGACCTTCAGGTATATCTTCATCTGAC
ACGATTATTAAAGCAGTGTGGTTACTAGTATTCTCTGCCTTATGTGAATT
TTAGCAACATATTTTGTGAAATGATATTGTCTACTGTTCTTTTGGTTTTC
AAATACGTGTTAAATGATTGCATGCCGACTGGACTGCTAGACACAAACCC
CTTTGTAAATAGGTTTTTGATTCAGTTTGTTTAACTGCAACGAACCAATA
ATGAAGGACATCTTGAATCTTGAACCCTCAGATGGAATATAACCGAATCA
AAACCCTCCCGCTCGCGGCGTTTGACATCCTGGCCTCCTTGCGGTACGTT
TCCATTGACCAGAACCCCTGGCAGTGTGACTGCAGGATGCTCCCCTTCAA
GGGAAGACTGACGGGTTTCTACACGTTTGAGTACACCATCACCTGTGCCA
GCCCTGCAAACCTGCAAGGTAAGAGCTTGCTGCACGATGTGAACCCCGAA
GATCTGATCTGTGAGGAGGAGGAAGCGACAGACTCTCCGGATGATGTTAC
CCCGGAGACGGTGAACACGCAGAGACCTCACGAAGCTGTTGACGTTGTCG
TGACTGCGCACTGGCTGGGAGTGGCGCACACCCTGCCGCCACCGGCACCT
GCTGCAACAACTCCTCCCCGCAACTCTCACGGTCAGCCGGGCAGGACGGA
GGGCTACACCGGGGCTTCTTCTGGCGGGTTCCCCGTGCAGGTATCTATCT
ACTCATCTCTATTATCATCTCTATCCGTCTAATAGTCTCTATATTCATTC
ATTTGTCTTTTTTCTATTCAGTGGTTTGGTTGCATACTCTTCAAGCAGAG
TTTGTTGGGAAGATTGTGACCTCCTTATCATATGCTACGGTTTTGCTCGA
CCTAGGAATCTTCCGCAAGAACCTCTGCTTCGAGAGTAAAGGCTGCACAA
ATAGCATGTGGCCGTCATGAATGGCTAGCTCTGTTGACAAAACAACACTG
CATCTAGGGTTGTATGGATTACAATTATTGATGTAAACGAAATTGATTAC
CAGAGAGAGGTTACAGTCTGGTATCCATCGCTATCGTACTTCTTTCTTTC
ATTTTCGGAACGGAAGAGACTCAGAAGCTACAATAGGGACGGAGACTAGG
TTAGAGTATAGATCTCCAAGACATTCGTTTGTTTTCTATGTTCATTGGTT
TATTTAGAAAGACATTACAAAAACAGGTAGAAAACGGAAACGAAAAACAA
AGAGGCACAACCAAAAGAAGTAAAAACCAAGACAGCTTCTACAATAGAGA
TCTCCAAGACATTCGTTTGTTTTCTATGTTCATTGGTTTATTTAGAAAGA
CATTACAAAAACAGGTAGAAAACGGAAACGAAAAACAAAGAGGCACAACC
AAAAGAAGTAAAAACCAAGACAGCTTCTACAATAGTTATATGCAGGTCTG
GAATAGTATCCAAAACATTCTTACAGTTTTCTCTCTTTTTTTTTGCAGGT
GTTCCTGACAGGATTCCTGCCCGGAATATTGCTCGGGGTGCTCCTCGCCT
CCGCCGTGTTTGTGCCACTCTGGTGCTGCCACAGGAGGGGGAAGAGTGCC
GGGTCTGTACCCGACCGCGGCGCCGTGTTCAGCAACATGGACACCACAGC
TACGGTCACAGCTATCTGTCCGGACCAGCGAGGGGGACATGCCTTTATCA
TAGAAAAATCATAAACGCATTAGCTATCTTCGGCCACTCTTACATTGAAA
GGAACCTTGTATCCAGAATTCTTAATTTTCCTCAGATTGGCTCAATATCA
ACACCACAGCTACTGTAATAGCTATCTGCCCAGACCAGGCTCGAGCACAT
GGCTTTATCATAAACAGTCAGGAACACCCAATAAGTAATATCAAAATAAA
TAAAACATAAGGCGACAGTGGCCAGACGTTATATCAAACGATACATGGCA
AGACATATAAGAATAAGTATAATGATATGTATGTGTATTCGGAGAAATTA
ATGTTACCTGTCAATAGACAGGATTCAAATTTCGTTATTGTAACGATTGA
CAAACGACCAAACATTACATAAAATGATAATGTAATGTAAGTTTGTTATA
CGGAAAATCTAAGATTTTGTCTCTGTGATGATCGAAAATAATGTATATAA
AGTCTGCCAAATAGCTGTGACGTTAAATATATCATTTAAAACCATTGGTC
TTTTTATTGGTGTCTTAATCACAGGTCACAAAGGCAACTCTGGCATCATG
ACTTGTATAAATATGATGAAGATAAGAATATATAAAAACTGACAATTTTT
TTCAATAAAAGGCTGCTCTTTGTATTTTA Coding sequence (CDS) from alignment at Sc0000003:621426..628154- >Blg00711.3 ID=Blg00711.3|Name=Blg00711.3|organism=Branchiostoma lanceolatum|type=CDS|length=1332bp|location=Sequence derived from alignment at Sc0000003:621426..628154- (Branchiostoma lanceolatum)
ATGATCACCTTAGGATTCACAAGGAGACCCACGTCTCTCTCGGACAGCAT
GGCCGTCCAAATGAAGAGGTTGCTGGTTCTGGCACTGCTACTGCTGAAGG
AATCCGGACCGGCCGCGGCCTGTGCTGACAGGTGCGATGACTACGCGTGT
CCGTGCTCCGGGCTGGGTTTCAGCAGAGTTCCGCAGTTCCTCCCGACTCA
CGTCGCTCGGCTGGACCTGACCAGTAATGCCATCACGACAGTAAACCCGC
CCGACTTCGCAAGGTACTACAACCTGCAAGCGCTAGACCTCCGGACCAAC
CACATCTCAACAGTCAACAGCCGAGCGTTCTACAACCTCAGCAGCCTCAC
AGCGCTGCACCTGGCCGCCAACCGGCTAGCCAGCCTCCGAGCCGACATGT
TTATTGGCCTGGACAGTCTGGAGTACATGGATCTGCGCTTCAACAGCATC
CAGAACGTGGAGTGTCCAACCTTCAACAACACTCCGCTGCTGAATACTCT
CATGTTCTCCAACAACAGGATCGTCAGCGTTCCAGCGGACATGTTTGGAC
TGGATATGTCTGTTCTGCAGGTACTGGATCTGTCGTACAACCAAATCAAC
GCCTTTCCCGTCGAGGGTTTTGGAAATCTTAGCATTTCAGCGCTATCAGA
CCTTCAGATGGAATATAACCGAATCAAAACCCTCCCGCTCGCGGCGTTTG
ACATCCTGGCCTCCTTGCGGTACGTTTCCATTGACCAGAACCCCTGGCAG
TGTGACTGCAGGATGCTCCCCTTCAAGGGAAGACTGACGGGTTTCTACAC
GTTTGAGTACACCATCACCTGTGCCAGCCCTGCAAACCTGCAAGGTAAGA
GCTTGCTGCACGATGTGAACCCCGAAGATCTGATCTGTGAGGAGGAGGAA
GCGACAGACTCTCCGGATGATGTTACCCCGGAGACGGTGAACACGCAGAG
ACCTCACGAAGCTGTTGACGTTGTCGTGACTGCGCACTGGCTGGGAGTGG
CGCACACCCTGCCGCCACCGGCACCTGCTGCAACAACTCCTCCCCGCAAC
TCTCACGGTCAGCCGGGCAGGACGGAGGGCTACACCGGGGCTTCTTCTGG
CGGGTTCCCCGTGCAGGTGTTCCTGACAGGATTCCTGCCCGGAATATTGC
TCGGGGTGCTCCTCGCCTCCGCCGTGTTTGTGCCACTCTGGTGCTGCCAC
AGGAGGGGGAAGAGTGCCGGGTCTGTACCCGACCGCGGCGCCGTGTTCAG
CAACATGGACACCACAGCTACGGTCACAGCTATCTGTCCGGACCAGCGAG
GGGGACATGCCTTTATCATAGAAAAATCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00711.3-exon-Sc0000003-1570713199:627300..628154 | Blg00711.3-exon-Sc0000003-1570713199:627300..628154 | Branchiostoma lanceolatum | exon |
| Blg00711.3-exon-Sc0000003-1570713199:625000..625222 | Blg00711.3-exon-Sc0000003-1570713199:625000..625222 | Branchiostoma lanceolatum | exon |
| Blg00711.3-exon-Sc0000003-1570713199:624082..624388 | Blg00711.3-exon-Sc0000003-1570713199:624082..624388 | Branchiostoma lanceolatum | exon |
| Blg00711.3-exon-Sc0000003-1570713199:623722..623808 | Blg00711.3-exon-Sc0000003-1570713199:623722..623808 | Branchiostoma lanceolatum | exon |
| Blg00711.3-exon-Sc0000003-1570713199:623015..623473 | Blg00711.3-exon-Sc0000003-1570713199:623015..623473 | Branchiostoma lanceolatum | exon |
| Blg00711.3-exon-Sc0000003-1570713199:621426..622256 | Blg00711.3-exon-Sc0000003-1570713199:621426..622256 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:621426..628154 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00711 |
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