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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:974881..981124+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00444.1 ID=Blg00444.1|Name=Blg00444.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6244bp|location=Sequence derived from alignment at Sc0000078:974881..981124+ (Branchiostoma lanceolatum) CTTCGTCCCAGCTGGTAGCTTGGAGCGCGCGGACTGACAGGTACCGACTA
AAATTGTGCAGAAAGAATAGCTTGCAACGTCAAATACACCTGTTCAGGTA
ACACTAAGCTGCTTGTGAACGAACACATTTGTACGAAAATCTGTTTCATT
TAAATTTGCGGAATTGAGCTAAGGGAGCTTACATTTTGGGGGAAGCTAAA
CTGGGCCGTGTTACATGATGTTACATAATCATGCATGTTTCGGTTGTAGG
AGTGTTTTAGGGATTAAAAATGTAGTCTAGATAGCATGTGCTAACCACCA
AGCAGATCTTTGGGGTTAAATCATGACGGGTTTTGTGATCCCTTGGCGAG
CTGTATATATGATCAGATCCTGGCCGCAGTCAGAAGCCGTCACGAAATTT
GTGCCGAAAGATCTGCTTGGAGATTAGCCTCTGCATCTGGCATGATCACT
TTACAACTGTTACATAACTTTAATGGTTAAGTGGTAAGTTATAATGTTGC
CTGCGCTGCAAAACCCGTCCTCACAGAATAGTTCTACATTCATATTTTTT
TTGCCACCAATCCTGGTGGAGTTGACTGACCTCATTACATGTTGTATAAT
AACTATAATATACGATACATGTAATCATACTTCACCAATGGAACAATGTA
AAGCGCTTCAGATATAAATGGTGTAACATTAAGTATTGATATTTACCTTC
GTCAAGAAGGTTATGATTTCGGCAGCGTTTGGATGTAATGTATGTATGTC
TGTATATGTTTTAGCAGCATACTGTAAATGCAGAAATGTTCGCGGTGGTT
TTATGTTCGTAATTTCGCGGCGACTGTTCACCGCAAACTTAAAACCACCG
CAAACATTTTTGTCCAATACTGTAGCAGTATGTGACTATAGCGCTGCCGT
GAACTTAAAAGCACAAAATAAAGCGCAAAATAAAAACCATACAAACTTAA
ATGCATTTACAGTAACTTGAAGCTACGAGAATGGATAGATTGTTGTGAAA
CTCGGTACTAGTATGTGGTTAGTTCATGTCCTATCAAAGAAATAATTAGA
TTTTGGGCCCTTAGTGGCTTTCCTTGGCACTGCAGCAGAATTTCTGGTTC
TGATATTTTGTTTTGTGTATGTACAAAGGCTGGAAGTCATTATTATTATT
CTCTAATTTGCAGACATGGATGCAGACGGCCTCACGCCCCAGAAGCAGTT
CCAAGAACACTTCTTCACCTGTGCCAGCAGGGGTGATGTGAAGACCATAG
AGGATGTGCTACAGCAGGGCACGGTCAAGATAGATGCAACCAATGACCAC
GGCTGGACTGCACTCATGTTCGCTGCCAGGACTGGACAGGACAAGGTGGT
CAGACTGCTGTTGGACCACGGGTAAATGTTAACTTTTTATATAGCAGTCA
TTATCAGTAAGATTCAGTAACAGGGATGTAGGCAAAAGACTGAGTGGATT
TTCTTAACTTCTATCTTGGCTTGAGACATCATGATTAGAGCACCCGGTCT
TAGTAGTAAAATACATTGTAAACCATTTTCAAGACAAAGGGACTACTAGT
AGAACTGTCATAGACTGTACGCTTGCTAGATCAATAGCTAGCATGCTGAA
TATATCAACTACTCTCTAGTCTGACTAAATTGCACTCCGATAGCCCCCTG
CCCCTGCCAGCAAGAGATTGTGTAAACAGAGGCTAACTACTATACTAGTA
TATGCAGAAGAAGGTCACAATTTTCCGAACCAACCTCTGCTTGTAGATTG
GAATCAACAGTAAAGCAGGAAGACAGCATCTAATAGAAGATAGCAGCCTT
TGGGGTGTCTTTTCTCATATACCATATACTCTAATGGCGTTGTATTTTGA
ATTTCAGAAAGTTTATGTATTTTTTCTTCTGTTTTAAGATGTGACACAAC
AGTGATGAACAAGTCGTGCCAGACAGCTGCAGACATCGCTGCATTTTGGA
ACCACACGGCCGTTCTGACTGAGCTGGAGAAGAAAGGACAGACGTCTGAC
AGTCAGCCACAAAACTTCTGTAACTACTTTGGCTACAACCCTCTGGATCG
CTATGCACACAAGAGGAAGGATGAACAGTGGCTAGAGGAAAAACTCAGGG
ATCAATCTACTGTTATCCTGCTGTTTCATGATCTTGGGCTTGTGGTGACC
AAAGGTGAGAAGCTTGCTGCACAATCACGGGTCACTCAGCCATGCCATTT
CACTTTCAACGACACCTCTGCATTGTTCGAGGAACTTGGAACAGAGAAAA
TTCTCTTGTTCCTTGGACTGGGGAGGCTGCAACCTGACAAAACAGATGGA
NAACGACACCTCTGCATTGTTCGAGGAACTTGGAACAGAGAAAATTCTCT
TGTTCCTTGGACTGGGGAGGCTGCAACCTGACAAAACGGATGGACCAAGT
CCTCCTACAAGTGACAAGGAGGAGCATCTCCCTGCATGGTTTGCTCTGGA
TGTCACATCGATTTCACAAGAGAAAATCCTTAGTATCAAAGAAGGATTGG
AGATTGCCTCATCTCCCTTCCCAGGTCTGTTCCAACTACCTGAGAAAGAG
GCAGGGATCGTAGCCCAAGCGAGGTCCCTCCTAGCCTGGCACCAGCGGTA
CAAGTTCTGCCCAACCTGCGGCAGCGCGGCTGCTGTGGAAGAAGCTGGCT
ACAAGCGTAGATGTCAGAAGGAGGGGTGTCCGAGTTTGAAGGGCGTACAC
AACACCTCCTACCCCAGGACTGACCCTGTTGTCATCATGTTGATTGTCTC
CCAGGATGGGAAGAAGTGCTTGCTGGGAAGGGGCAAACGGTTCCCCGGTA
GGATGTACTCCTGTCTGGCTGGCTTTATGGAACCAGGTAAATTCTCGTTC
AATGAAGTTTTTTTTTAAAAGTTTCACATATAATCGAATTTGTTTTGTGT
GTGTAGGAACTTAAAAGACTATCAGGTTCATGTATATTGTCTGTTGAGTG
AGTCTGAAAAATAAGGTGCACAGAAAGAAATTTGGGTGCACCACATAGAA
TAAAGTTGAATGTCAGCAAAACATAATTACAGTTTAATGCTCATATAATT
GTAATTAAGAACTCCAATCTGTAATTCTATAGCTAACTTCGAATTTCAAA
CAAGTAATGCATCAAAGAAAGTGCAACAAAGGGTTAGATTGCTTTTTCTG
ATACTGCTTGCTAGTATACTCAATAATACCTTTACCCTTAAGCCTACAAA
AATATCTAGGTGCACCAGTGCACCCACAGTCAAAAATTAGGTGCACAGCT
CCAATTTGGGGTGCACACAGGTGCACATGCACCCACTATTTCGAGCCCTG
AACAATATATTGTACAGTCATGTGTAATAGCTATAATGCTTTATGATTAA
CTGTGCCCAGAGATGTGGCTTTTAACCTACATGTGCACATTGCCCCCTCC
CTCCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAAGTTTACGAGGAG
TCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAGCCAACCCTTCCC
TCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACGCCACCTCAGAAA
CCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAGTGGTTCACCCGG
CAGCAGGTAAAACACTCATACTTTCAGTTTCCATTATCACCAGGTTCTCC
CTGGCTCTCCCATAGAAATGAATAAAATCAAGATAAAATTTATGTTTTGT
ACAAAGTGCACAAAGTATCTTGTTTACTCTGTTGACCATCGGTGTACATC
ATCCTTGTACATTCAAACCTATTTAAGTGCCACCTCTTCATAAGAACCAC
CTGGCTGATGTGACAACTTTTTTTGTGGTCCCATTGAAGCATTAAGAATC
CTATCTATATATAGTGACCACCTGTCCATATAGATCAGATTTTATTGAGT
GGTCTTCTTGGGCAGTTTTGACTGTACTTGAAAGGAAGAAAGAGGATATA
AATGAAATAAACTGTATGAATTTTCATGTATACCAAAGTCCCTTACCCAT
TATATTTATGATGACACATCCCTATCTTGGTTAGCTTTAACATTTACAAG
TTGATATATGAATGTGTCAAAAGGTGGCAGAAGTGCAGACCGGTGCCCCC
CTCCCCACGGATGCCCTGACTAACCCACGTGCTGAAGGCCCCAGTTTCTT
CCTGCCCCCAGCCCAGGCCATCGCACATCAGCTGGTTAAAGCATGGCTCA
GAATGTCACCTAACCTTTAAACAAAGCTAGAGGGAAGTGCATTCATTGCA
CCCCCTATAGGCTTTATAATGTGACATGATGATGATGGTACAGATGTTGA
TTAACATTGAAAGGAAAAATCTGAGAAGAGATGCCTTAGAAACCCTTAGA
CAAAATTTTTATATGAAAGTATTTTTTGATATCAAGTACTTTATTTGATT
TTCTACAGGAAAAGGTTATAGAAATGGAAGATGTTTTATGATAGAGAAGT
TGACTTTGAGTCCAAAAAATCAATGCCAAAATGATGAATTTTATATATTA
TTTAAGTGTAGACCACTACATACATTTGTAATGGGTTGGAGAGTAAGTGT
GCCATTGCTACAGGAAAAGTAGAAGATTTGTGGCAGCTTAACGAAATGTA
TCTAAAAACTTAATAAATGAAAAACCAGAGGACCACAAAAACCTCAAACC
TAACCTCAATATAGCAGTGTTTCTGCTTTTAGGTGGTGATAAATAGAAAG
CAACCACAGGTAAATTGACTTTTTGGATGTCGGTTAAAATGTCTTAAAAT
AGCATCAAGTGTTGTAATGTTCAATTGTTTTGTATCTTTTTTTAAATTAT
TTTGTCAGATATTACTTGAAGATTTGATAAAGAATTAATATAAAGAGATG
TATAGTATCATAAATTGATGCAAATTCCACATGTTTAAACATTGTAATTT
GTGTTGAAAGACAGGTAAATTAACTTGAGTGTGAGGTATTTCCTTGTTGG
TCAAAGACATTTTAACATTTGCTGTGCTTTGGTTTAGGCTAACTTTTAGA
GCATATAGCTTGTAGATGTTCATCTAATAAGCTCATTATAGATATGCCAA
TGGTTCAGGATGGTTAACTCTGCCAAGACCTTTGTGTCTGAGTTTCTGAG
ATGTAGATTGTAATGTTATAGGTGGAGATGTTTGTAGAATAATGGTTGCC
TAATGTGGACATTGAGATTTTCAAATAACTCTAAATTAGGTCCAACTGAA
AGGCATTTGGAGATTTAAGCAAAAAGGCTATTTTTTTATGAAATTTGAAA
TTTGGCACAACATATTGATGACTGGAATATTAATTCTTGATAGGCATGTT
TAACACCAAGTTTTGTTTAATTCGTTTTCTGAACAGTCTGCCTGTGTTTA
TATGTCATTGAATATATTCAACACAAAAATAACAGATCACACAATACACA
TATGCAATGCAGATGTAATTTATTTCCAGGACTAGAGCACTTCTGACAAA
CAGTAAACCAAGAAAGACCAGTCTTAATTGTATATATTACTAGCTGTGAC
TAAAATCTTAAACACATGTGCTCAAATAAATTCATTCTCAACCTTTCAGC
AGACTTTGTATGTTATCCTTTCTTCAGATAAAGTTGTTCCACACTAGAAT
CACAAAGTCAAGAAAACCCAACCTTTTGCTTCTAACACAAAATCATTATC
GGAGTATACATAGTGTTTTCAAGGTCATTGTTCTTTCTTTGACAGTCGTC
AGTCTCACAGACATAAAATATGACATTGATGGTACCTTACCAGCTTCTTT
ACCTGATTGGTCAAGGAGATGCCATATGACTAGAAAGCTAAACTGAATCC
AAAGTGCAAAGTGGAAAAAACTAAAATGCTTGACTTGACAGAACATTTCT
CTTTATACTTACAAGATGATTATTGTCTAATGCCCAAAAAATAGAAGGTT
ATAACAATAAGCATCAAAACGATACTACGTCAAAATGTCGTTAGAGTCAG
ACTGTCCAATCAGAAAAGGTGGTTTAGGGAGTCTCGGGTTCGGTTCCCCA
CTGCAGGCACTTGCTGATGTCACAAGTACACTCCAGAATGTAGTCATAGG
AGTGCTGCTGGAGAGTTCCGTCCTCACACATCATGTCCACAGTTCGCCGC
TCGCTCTTGGAAGGCTGGCAGCACTGGCACTCATGGCTGTGGGGTAAGGA
AAAGGTGTTATGGAGCATGCCCACAGTTAAATTATCTACAGCCTGGTTTC
TATTAAAATGGCATGTTTTAACCTCCTTGCTGCCTAACACTGTA Coding sequence (CDS) from alignment at Sc0000078:974881..981124+ >Blg00444.1 ID=Blg00444.1|Name=Blg00444.1|organism=Branchiostoma lanceolatum|type=CDS|length=1263bp|location=Sequence derived from alignment at Sc0000078:974881..981124+ (Branchiostoma lanceolatum) ATGCAACCAATGACCACGGCTGGACTGCACTCATGTTCGCTGCCAGGACT GGACAGGACAAGATGTGACACAACAGTGATGAACAAGTCGTGCCAGACAG CTGCAGACATCGCTGCATTTTGGAACCACACGGCCGTTCTGACTGAGCTG GAGAAGAAAGGACAGACGTCTGACAGTCAGCCACAAAACTTCTGTAACTA CTTTGGCTACAACCCTCTGGATCGCTATGCACACAAGAGGAAGGATGAAC AGTGGCTAGAGGAAAAACTCAGGGATCAATCTACTGTTATCCTGCTGTTT CATGATCTTGGGCTTGTGGTGACCAAAGGTGAGAAGCTTGCTGCACAATC ACGGGTCACTCAGCCATGCCATTTCACTTTCAACGACACCTCTGCATTGT TCGAGGAACTTGGAACAGAGAAAATTCTCTTGTTCCTTGGACTGGGGAGG CTGCAACCTGACAAAACGGATGGACCAAGTCCTCCTACAAGTGACAAGGA GGAGCATCTCCCTGCATGGTTTGCTCTGGATGTCACATCGATTTCACAAG AGAAAATCCTTAGTATCAAAGAAGGATTGGAGATTGCCTCATCTCCCTTC CCAGGTCTGTTCCAACTACCTGAGAAAGAGGCAGGGATCGTAGCCCAAGC GAGGTCCCTCCTAGCCTGGCACCAGCGGTACAAGTTCTGCCCAACCTGCG GCAGCGCGGCTGCTGTGGAAGAAGCTGGCTACAAGCGTAGATGTCAGAAG GAGGGGTGTCCGAGTTTGAAGGGCGTACACAACACCTCCTACCCCAGGAC TGACCCTGTTGTCATCATGTTGATTGTCTCCCAGGATGGGAAGAAGTGCT TGCTGGGAAGGGGCAAACGGTTCCCCGGTAGGATGTACTCCTGTCTGGCT GGCTTTATGGAACCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAAGT TTACGAGGAGTCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAGCC AACCCTTCCCTCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACGCC ACCTCAGAAACCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAGTG GTTCACCCGGCAGCAGGTGGCAGAAGTGCAGACCGGTGCCCCCCTCCCCA CGGATGCCCTGACTAACCCACGTGCTGAAGGCCCCAGTTTCTTCCTGCCC CCAGCCCAGGCCATCGCACATCAGCTGGTTAAAGCATGGCTCAGAATGTC ACCTAACCTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00444.1-exon-Sc0000078-1570713199:974881..974920 | Blg00444.1-exon-Sc0000078-1570713199:974881..974920 | Branchiostoma lanceolatum | exon |
Blg00444.1-exon-Sc0000078-1570713199:976044..976225 | Blg00444.1-exon-Sc0000078-1570713199:976044..976225 | Branchiostoma lanceolatum | exon |
Blg00444.1-exon-Sc0000078-1570713199:976769..977155 | Blg00444.1-exon-Sc0000078-1570713199:976769..977155 | Branchiostoma lanceolatum | exon |
Blg00444.1-exon-Sc0000078-1570713199:977250..977716 | Blg00444.1-exon-Sc0000078-1570713199:977250..977716 | Branchiostoma lanceolatum | exon |
Blg00444.1-exon-Sc0000078-1570713199:978287..978486 | Blg00444.1-exon-Sc0000078-1570713199:978287..978486 | Branchiostoma lanceolatum | exon |
Blg00444.1-exon-Sc0000078-1570713199:978954..981124 | Blg00444.1-exon-Sc0000078-1570713199:978954..981124 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000078 | genome | Sc0000078:974881..981124 + |
Properties
Property Name | Value |
GeneID | Blg00444 |
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