|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:1041338..1045327+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00436.1 ID=Blg00436.1|Name=Blg00436.1|organism=Branchiostoma lanceolatum|type=mRNA|length=3990bp|location=Sequence derived from alignment at Sc0000078:1041338..1045327+ (Branchiostoma lanceolatum) GCGACGTCAACATGTTTTGACACGTAGTTGACTGCTCTAGATCTGTTCGC
ACAACTTCTCAACCACATTTCTTTTGTTTTTTTGTTTTCATTTCATTTAC
TGCATAACCTAAGTTACTAACATGTATGTTAGGTCTTTCTTGTTCCTGGT
ACTGTGGCTGGTAGGGGCGAACAGCCACCTTTTGAAGTTTGAGGATTGCG
GTGAGTTCAGCGGTTCTGATTTTAAATCTAAATCTCTGTTTACTGGTAAC
TTTACCAAGAAACGCTACGCTGTCGTCACAATGTGTTACCGAGCTTATGC
TATTTACAGGTTCTGTGAAGGGGAGAGTTATCCAGGTGGACTTTGTGCCG
TGCGGATACCTCAATATTGAGTTCCACATGTGTAAGTGCATTGTTACTCC
TCAGATAAGTTGGCTCTACCATTCTTCGTCTATGGTACCCTGCTACTACA
CATATGTCATTCAAAAGCCTAATATACATGAACGCTACTGGAAAGGGTTG
CAGTCTTTGGTCCACTGTTCATTGTGCTTATCGAAAAGAGCTAGTGGAAT
TTTCCCGGTACAATGAGCCTGTAAACACTGGCATGTTTTCTCTGTTACTA
CCAGTGGAAGAATTTCTCTTCATTGAGCTAAACCGGTTCGAGATCACCAC
TATCAATCAATCAATCAATCAATCAATCAACCAATCAACCAATCAATCAA
TCAATCAATCAATCAATCAATCCTTTCTTAAATAATTATGGGACATTTGC
ATTAATTATGCAAGTTAGGGATTCATTTGAATAATTGATATCTGTTAATG
TTCCATCTTCAATAAACTACAAAACGTTACTTGTATTTGAGTCCTACATG
TATAATAATGGAAAACACTGCAAATACGGATTTTCCTCAGTAATTATGCA
AATTGAGTTCTGCTGCAGTACCAAGGTCACATACCAGGGGGCCCAAAATC
GACCTTGACCTTTGTCTCATCGACGCCCATCCACATACCATTTGTATGGA
GATAATTTTTACAATTTGCTTAAGGATGGGGCACACTGCGCATCCTCATG
CACGCTGATCTACACGACAGCCCCAGTCACTGCCAATGGTATGGGGGTGG
GGAGATATATAATCTTAGGCTATTTCTAACTACTGCAAGCCTGGAGTCCT
CATGTATTATCCAGTAGTATCTATTCCTACAGTGGAGACTGTGCAGAACG
CCACCATACTCATGAACCAGATTGTGGAGGGCAAACCGGAGCCGGCTCCA
CTGCCGTACATCTACGCCTGTAACCAGTACGACTTCTACGGACTGAGGTG
TCCTTTTCGTGCGGGGGGACGGTACAACTTCAGTCTGGACCTGGCACAGG
AGGAACCAGAGGTGTAGATACCTGTTACAGTACAGTCAAAGTTTGGATGT
TGCACAACATTTGTTCGAATTTCGTTTAGACCCTTGTAGTGCCTAGTGGC
AAATAGGGCAGCGCAAGTGTCCTCGCTGTTTTAGTAGCAGAGTATATCTT
ACAGGGAGCGGTTGCCAGCCCTTCTCCTTTAAGCCCCCCTCTCACTAGAT
CCGCGGCACGCTGGCGGCGTCACTGCGGCCGATCGAATTGACAAAGCACT
CAACGAATTTCATGGACAAAAATGAACGTTTTTAAGCTTTGTGTGCTTTG
TTGTCTATTTGATTATACTTGTACGTTTTGAATGATATTTCCATTGTAAA
GTCAAGGGTAACACAAGTCCAGTTTAGGACGCAGCGACTCCGCCAGCGTG
CCGCGGGTCCAGTGAGAGAGGGGCTTCAAAGTGCTCGAGGCACCTCCTCG
AATACTGGATCCCCTATTTGCGTCCCTTCCGAAAAAACGGGTGCAGTCCC
AACCGGGTTTGAACCGCGGGTCCAGTGAGAGGGGGCATAAGGCTGCAACC
AGTTGAGCTACAGAGACATCCCTGCTTACAAAAGACTATGGTCCATAATT
TCATGTTATTGACATGGCACAACTGTGTATAACTATAAAGAATTTAAAAC
CAAAAAGCTTAGATTGCATTCCATAGCACTTCTTACAATAGTCACTTGTG
CCGGATCCACCTGTCACCATTGTTAACTTGCACTGTCTGTATACTTTTAA
TATACATTGTTTTATGTTGCAATTAGAACTCGGGCAAGACCTTGCAAACA
AAACTCTATATAACGTACGTGTATATGTTATCTGACCTTCCCACCCAGTT
CCATCTGAAGGGGAGGTTCACGCTGAAGGACCTGTCTGCGCATGTCATCT
TCTGCAGCCAGTTCAGCTTCTGGTTCTGTTAGCTGAGGACAATGGGCATG
AGGCTCAATTCCCGTCTCCATCAAAGTTACGCACTCTGGTTATAAAGCAA
TGCTATACATGGCCATCTGTACACAAATAGTATGCACCCATCAAGTCTTC
TTTCACAAGCATTGACATTGGAATGTCATTTTCTGTACATTTCATGTTCG
ATTTATGTTACAAAAATTATGTGCCATTTGTCTTATGTTCTCTGGGGCCT
CTTGGAAATCAACAATCTTGTTGTAGGGGCTGACCAGATGTTTTGTAGAT
GAAATTAATAATAACATAATAAATCTACATCTTTATACTCAATCAAATAC
TGGATACTACTATAATACAAGAACCTCTTTTTTATATAATCTATAATGAA
ATACTGGATACTACTATACAAGAACCTCATTTTTTATATACTGGACTGTG
ACCGTTACACTACAGGATGTACTAAGTAAAGTGGTTTCATATTCTTCAGT
CTAGAATAACCTTTCAACTAAAAGCAAAAGTTTGATGATCAGATATAAAC
GACAATCAGATTTATTGGTACATTTAGTCTTTTTTTATCCGTCATTTAAC
ACTATGGGGAAGAACTGGTTCCAAGTATAAATTTCCACAGTTGATGGTTT
TTATTCTGAGTATGCAATGTATGTATCATGAGATTTTGCTGCTATACTTT
GAAAATATATCTGTTGCAGAAAATGGCAAATTGTGATTTGGTCACAATTC
CATTTTATTCAACATATAAATGTACATGAATGAATAAGATCTTTCATATC
AAAACAATGGTCAAGTCAAATGTCATGATGTTCCTGCACTTTCGGGCTAA
AAAAATCATGTTCTAAAGGTAATACGTACTCAAATCAGCAAACCTTATAT
TCTTCTCAATAACTGCAAACAACATATCACATATACTCATAATTTCCCTG
AGAGAAATGTATTAGAACTATCACTGGTTTACTATCAAGATTTGCTAAAG
ATACAGTATACATGTGTTCAAACAACATCATTTCTGACTGTAATCTCTCA
TGACCTACATTTAGCTTTGTTTGTCTAAAACCAAAACATCACTGAGAGTC
ACACTGAAAGATTAGCATCTATTTCAGGAGTTTTGGTTAAATACCTGTTG
AATTCTGGTTCAGTCACTGATGAAAGACAGCGGATGGTGTCTGAAAGGTC
TGACCGTTTGCAAGTCTATCCAGTTGCTTGAGTAACTATCATCTTGCATA
CTAGTAGTTTAAGCTGACTCTGATACATGTAAAAATGGAATTTTTGTAGG
TTTAGACATTTTACCTAACCTTGTATACATAGTATTACAAATATGCCAAG
AATACTGTTGGATTTTGTAAGTCCACAATGATAAAAAGTCTAATAAATCT
GACCATCTTTTAACACTGCTAACTCCTGTATTTGGCCTCCTATCATTCAT
ATTCAAATCAAATGTGCGTTATTTAAAGTAAAAAGAAGCCACATAATAAT
CTCCAACTATAAATTGTGTGACTTTGTAATCATGATGTAACTGAAAATAA
TCCTTTCTAAACACCTGTTTGGCATAGTGCAACTATATCTCATGCACTAC
CCAATGATGTCCACTTTGTGAAGTATAAAAAAAATCCATTTTCACGAGGT
AGGAAGAATCACAATAATCCCTGGTCATGTCTGTCTTGGAATAACTTTGT
GATAGAAGGGATAGAGGGGAATAAACATGTAAAACCAGAA Coding sequence (CDS) from alignment at Sc0000078:1041338..1045327+ >Blg00436.1 ID=Blg00436.1|Name=Blg00436.1|organism=Branchiostoma lanceolatum|type=CDS|length=336bp|location=Sequence derived from alignment at Sc0000078:1041338..1045327+ (Branchiostoma lanceolatum) ATGTATGTTAGGTCTTTCTTGTTCCTGGTACTGTGGCTGGTAGGGGCGAA CAGCCACCTTTTGAAGTTTGAGGATTGCGGTTCTGTGAAGGGGAGAGTTA TCCAGGTGGACTTTGTGCCGTGCGGATACCTCAATATTGAGTTCCACATG TTGGAGACTGTGCAGAACGCCACCATACTCATGAACCAGATTGTGGAGGG CAAACCGGAGCCGGCTCCACTGCCGTACATCTACGCCTGTAACCAGTACG ACTTCTACGGACTGAGGTGTCCTTTTCGTGCGGGGGGACGGTACAACTTC AGTCTGGACCTGGCACAGGAGGAACCAGAGGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00436.1-exon-Sc0000078-1570713199:1041338..1041537 | Blg00436.1-exon-Sc0000078-1570713199:1041338..1041537 | Branchiostoma lanceolatum | exon |
Blg00436.1-exon-Sc0000078-1570713199:1041647..1041718 | Blg00436.1-exon-Sc0000078-1570713199:1041647..1041718 | Branchiostoma lanceolatum | exon |
Blg00436.1-exon-Sc0000078-1570713199:1042520..1042721 | Blg00436.1-exon-Sc0000078-1570713199:1042520..1042721 | Branchiostoma lanceolatum | exon |
Blg00436.1-exon-Sc0000078-1570713199:1043536..1045327 | Blg00436.1-exon-Sc0000078-1570713199:1043536..1045327 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000078 | genome | Sc0000078:1041338..1045327 + |
Properties
Property Name | Value |
GeneID | Blg00436 |
|