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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:920697..928813+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00403.0 ID=Blg00403.0|Name=Blg00403.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8117bp|location=Sequence derived from alignment at Sc0000078:920697..928813+ (Branchiostoma lanceolatum) ATGAGCTTTGAGCTTGAATTGTCGTACCTTGCAACTAACCCCCCTCCCCT
TCCCATCCCTCATTCCCATAGGAAACCTGGTGAGCCACCCCTGGAGCCGG
GTCCTCTGCCTTACTTAGGTGTTGCCTTGGAGTTTTCCCAAAACCCCCTG
GGCTTCATCACGTCCCGTTGGAGGAAATATGGCGACGTGTTCACCGTGCG
GCTGGCCGGCCACTACACCACGTTCGTCCTGGACCCGCACTCCTTCACTC
ACGCCATCCGGAACACCAGGTCAGGAGAAAAAGAAGTGTCGTAGATCAAG
TTTGATCTGTTTCCTAATTATATTAACGTCTCAGATTGTACGAGTACATA
TACTGTGCAGGTTACTGTTCGTTTTATTTGTTCCGCTTAACCTGTAAACC
GCCTTTATACGCAACACAACAGTCTTGTCCAAGCTGCGTAAGGTATGATT
CACTCACACCGGAATAGACCGATACCCCTACTCTTTTCAATAAGCGTAGA
AGGATCTTGACGGTCTCACAGGACCTCCGGATTTAGGTACAATTCGAAAG
GACGTCACTAGGTGCCCATTCTCACCTATTAGGATGATGTGAATTTGATA
GTCATTCTTAGTGCTTACTTTAGCAAAAGGAAGTTCATTGAAAATGGGCT
TTATTGGTGTCATTGTTAGGGTTCTGGACTTCCGAGTGTTTTCCAACAAG
ATAGCCCATCGCGCTTTCGGCACGCCGATAGTGTACGGTACCCCCCGCGA
CTGGGTCCGAGCCGACAGTGATGCGCTGTATCCACAGGAACTGCAAGGAC
AGGGTTTGGACAAGGTCACAGAGGTAACGTTACATTCTTGCGGAGATTTT
GTCAAATGGAATGCAATTTTGTCAATGATGGAATGCAAATCTGACACGTT
TAGCCTTTGTTCTTCGCCCGTCGATCTGAAATTCTAAGTTGGATACTGCA
TGACTCTGCTGGATAAGATTGACAATTGGAAACCGTCCATCTCGCTGTTC
CAGGTCATGATGGGCAACCTTCAGTCCGCCATGCTGGCCGCCACAGACGT
GAAGGCGGAGTGGAACAGAGGAGAGCTGTGGTCTTTTGTGTACAGGATCA
TGTTTAGTGGTAAGCTAACCTGGAAGTCAGATGGTCGCATACTCCTCGGC
TCCAGGGCCAACATGACCCGAGGAACCTTTGCCTCTCCCTCCTGCCGACT
GAGAGTAACTCTGTCCGGAGTGCTGACCTTAGTTTCCATCGAGATGGGGT
TGGCAAGGCTAGGCATAGTCTCCACGAAATGTAGCAGTTGAGCTTGTTTT
GAGCGTATTTGGCGGTGTTTACGTTACAGAGATGCGCGCTTTTTACAAGT
GCCAGTCGGGTACTAGTATCTCTTTTAAAAAAAAAAGAAGTACAAAACAC
CTCAAGAAAACGTACAAAACCGCCAAACAAGCCAGACCGATGCATCTGCT
TGGGGATTCGGTGGGCAAAGTTTCCAGGACATAAGTATCAAATAGAAGAA
GATCAAGTTCACACAAGGAAGATTAAGTTTCCTTTAGAAGATCAGGTTTA
CACATTTAAGAAAACTTATTCTAAAATGTTTTCAAGGGTAACCCTAAATT
TCAAAAGCATAATGCACTTCCAACAACTCCGAGGTCATGCGCAATTTACC
TTCTTTTCTGTTTATCACCATGCACCAAATTATGGAAGAAAAACTAGTAT
GATAACGGCTTAGATTTCGTTAACATATTTTGCGCTCAACAGCGTCTTAC
AAGACGCTGTTCGGGGGACACAAAGAACATAAAGACGAGACAGCACGACT
GCTCCACGCCATGGAGGAATTCCAGAAGTACGACAAGAGGTTCCCAGAGA
TCATTTCGAACGTACCGTGGTGGCTCATGGGACATACCAAGAAACGATAT
GGATATCTGAAGGTATGTGACATACTAGTGCCCTGATTTGTTTCTTTTAA
CGTGTTCTATCTTTCTTTGGAAATATATGCAAAAAGTTTCATTGAAAAGT
GTAGGTATGAGGTGGACATGATATGTAGGTATGGCTGCTGCTTGTTCTTA
GCGTCGCTAGTGTTGCAGCTAAGATATTCTCGTCTTATTGTATTTTTGTA
TGTTTGTATGTGGTTTAGCAGCATAACTCATGAAGCTATGGATGGATTGC
CATAAAATTCAGTATGTGATTAGATCAGACATGTTCTATTGAAGGACTTT
GGGCCTCCTGGCAGCTTTTCGTGGTACTGCAGCAGAACACTCAGTTTGAC
ATGTCTTGTTCTGGACACGCTATAGTCACGATTTGGATGGCAGATAGCCG
CTTGTGCTCTCGAACAACTTTCTTTGGAGCATTTCAGGTGCTGAATTTGA
AGCAGGATAGTTTAAGAAATTGGTATTGTATTTTCATTCTGAAATGTTTT
CTTGCGCTTTTAGTCCATGGTATCTCCGGCTGAGCTCTGTCAGCGGGACG
TCTCTGATTTCATCAGAATGAGGCAAAAGATCTACGGTGACGGAAATCTG
TCTCCTGACGAAACGGCGGCTTTTAATTTCGGAACCATGTGGGCCTCGAT
GGTAAGAATCAACATTGATGTTTAGATTCAAACAAAGGTGCATGTAAAAA
ACGACACGTGAAACACCGCCTTTGGTCAGTTTGTAGTCTGGGATAGATTT
CATCCGGACCCATTTTGTCAACAGTACAGAACATACAATATAACACACCC
GGTGGCTGCGACAAGTACAGTCAAACCGGCATAAGAAGATCACTCAGGGG
ACCGATAAGAACTTTTCTGTGTGGTCAGGTGGTCACTATAGCCAATGCAA
ATGAAAATCTAATGGATCACCAAAAAGTGGTTACATTGGCCAGGTGGTCG
TTATATGGAGGTGGTCACTTGTATGTTGTGTTTCACCCCTCCCCCTTCCC
TTTCCATCACAGAGTAACACCGTCCCCGTGGCCTTCTGGACCTTGTACCA
CCTGTTGAAAGATCCTGTCGCCATGGATGCAGTCAGGGTAGAGGTAAACC
AGGTAACAATTACCACTATCTTCGGTTTCTTATCCAGATCTGTTTATCTT
CTTTGTTTCCTTAGTATAAAAGTAATTTTTTAATGATCGGAAGATAGCAC
TTGAAGGTAAAAATCCATGTCACGAAAGGTAATAACTTAACTGTTAATCT
TCAATCTCTGTAGGTTTTGAAGGAGACCGGACAGAGTTTGGAAAATGTGA
AGAAAGGGGACAAGATAGTTCATGTGACGAGACAGCAGTTGAATGGCATG
AAATGCCTTGGTATGTGAGCGTTACGCCCTTTCCACTAGAGGCTGCGACC
GCTGAGCGACGGCCGGGAGACCAAACACTACATCGCGCTCAAACTATAAA
ATCAAAGATGACACCAATCTAATTTTGGTCGCTCAGCGATTGCCGTCTGG
TGAAAAGTGGATCTTATTTATTAAGAGTCTCGATGTTAAAGACTGTTTGA
ATATATATTTAAATGCAACAATCCCCACAATGCAAAAATAGGTAAATATT
TAAACGACTGCTTTGACNTGTTCTATCTTTCTTTGGAAATATATGCAAAA
AGTTTCATTGAAAAGTGTAGGTATGAGGTGGACATGATATGTAGGTATGG
CTGCTGCTTGTTCTTAGCGTCGCTAGTGTTGCAGTTAAGATATTCTCGTC
TTATTGTATTTTTGTATGTTTGTATGTGGTTTAGCAGCATAACTCATGAA
GCTATGGATGGATTGCCATAAAATTCAGTATGTGATTAGATCAGACATGT
TCTATTGAAGGACTTTGGGCCTCCTGGCAGCTTTTCGTGGTACTGCAGCA
GAACACTCAGTTTGACATGTCTTGTTCTGGACACGCTATAGTCACGATTT
GGATGGCAGATAGCCGCTTGTGCTCTCGAACAACTTTCTTTGGAGCATTT
CAGGTGCTGAATTTGAAGCAGGATAGTTTAAGAAATTGGTATTGTATTTT
CATTCTGAAATGTTTTCTTGCGCTTTTAGTCCATGGTATCTCCGGCTGAG
CTCTGTCAGCGGGACGTCTCTGATTTCATCAGAATGAGGCAAAAGATCTA
CGGTGACGGAAATCTGTCTCCTGACGAAACGGCGGCTTTTAATTTCGGAA
CCATGTGGGCCTCGATGGTAAGAATCAACATTGATGTTTAGATTCAAACA
AAGGTGCATGTAAAAAACGACACGTGAAACACCGCCTTTGGTCAGTTTGT
AGTCTGGGATAGATTTCATCCGGACCCATTTTGTCAACAGTACAGAACAT
ACAATATAACACACCCGGTGGCTGCGACAAGTACAGTCAAACCGGCATAA
GAAGATCACTCAGGGGACCGATAAGAACTTTTCTGTGTGGTCAGGTGGTC
ACTATAGCCAATGCAAATGAAAATCTAATGGATCACCAAAAAGTGGTTAC
ATTGGCCAGGTGGTCGTTATATGGAGGTGGTCACTTGTATGTTGTGTTTC
ACCCCTCCCCCTTCCCTTTCCATCACAGAGTAACACCGTCCCCGTGGCCT
TCTGGACCTTGTACCACCTGTTGAAGGATCCTGTCGCCATGGATGCAGTC
AGGGTAGAGGTAAACCAGGTAACAATTACCACTATCTTCGGTTTCTTATC
CAGATCTGTTTATCTTCTTTGTTTCCTTAGTATAAAAGTAATTTTTTAAT
GATCGGAAGATAGCACTTGAAGGTAAAAATCCATGTCACGAAAGGTAATA
ACTTAACTGTTAATCTTCAATCTCTGTAGGTTTTGAAGGAGACCGGACAG
AGTTTGGAAAATGTGAAGAAAGGGGACAAGATAGTTCATGTGACGAGACA
GCAGTTGAATGGCATGAAATGCCTTGGTATGTGAGCGTTACGCCCTTTCC
ACTAGAGGCTGCGACCGCTGAGCGACGGCCGGGAGACCAAACACTACATC
GCGCTCAAACTATAAAATCAAAGATGACACCAATCTAATTTTGGTCGCTC
AGCGATTGCCGTCTGGTGAAAAGTGGATCTTATTTATTAAGAGTCTCGAT
GTTAAAGACTGTTTGAATATATATTTAAATGCAACAATCCCCACAATGCA
AAAATAGGTAAATATTTAAACGACTGCTTTGACCGGTGCAATGGCCTAGT
TGGTAGAGTGCGCGCCTTGCACACGGTAGGTCGTGAGTTCGAACCCCGGC
CGGGTCATACCAAAGACTTTAAAAATGGTACATACTGCTTTCTCTGCTTA
GCACTCAGCATTTGGGAAAGAGTATGGAAGTTAAACACACATCACTACCA
GCGGACCAGCCCCCTGCTGTAGTGACTTGCACAAATGTGTGTGGCCCAAG
GGCTATAGAAATGGAGATGGGCGCCACCCCTATGCGTCTTTTCAAGACGC
CCGGGTCACTTTAACTTTAACTTTATCATTAGAAAAAACAACGAAACCAA
TGATTAGCCCTACTCCATTATAACACTATATCCAAAAGGTATGCTAGCCC
TTATTGTGTTGTATTAGTAATAAGGATGTTAAGTTTTATTCTGTACTTCT
AAATTTGTATTATGTTTAAGAATTCCTGCCATACTTTGTACCGTGTACAA
TTGTCCTGCAATAAAGTTCTTCTTCTATATTATCGAAGCTGAAAGCGTAC
GCGATGTAGTTAGATTATTGCTGGTAAAAAAAAAGTATGTTTCCTCGAAG
CCTCACTGGCATGTTTCCAGATGAGTCTAGCGTTATCCTGCTTGTGTAAT
TTGTAGTTTATGTCTTAGTTTCTTAATACTTACTTTCCTTGCACAATATG
GCTAATGAAAAACATATAAGACGTTGTAAGAGATGTACTTAAGTTTTGTG
TCGATAATTATTGTTAAATGGAAGAAAAATGATGTGATTGAAATTCACAC
ATTTTTTACAACTGATACAGGCAGCGCCATCAACGAGGCACTGCGCATGT
GCAGTGCTTCTATGATCATCCGTGTCGCCACCGATGATGCTGAACTGGCC
TTGGAATCCGGCAGTACCTTTCGTATCCGCAAGGGAGACAGGGTGGCTCT
GTATCCAGGGTTTCTACACATGGACCCCGAAGTCTTTGACGATCCTGAGG
TATACCTCTGTTGACATTTATAGCCTTTGCCAAAAGGGTTAATAATTTAT
GTTTTCGGTGCCGTTTGTGGCTGTGTGTACGGTTGGTTGTGTTTTTGGTT
GGATGCGTATGTGTGTGGACTCAAGACGCCGTTGATGGATCTTTGTGGTA
TATTGTAGGTGGGTAGGTCAGGTAGGGGTCGGGAAGACCAGGGCCTTGTT
CGATGATGGGCCACCTGGCGGTTTTGTACGGTACTAAAGCAGAAATTCCG
TTTCTGATATCTCGTGTTCTGGATATACTATTGTCGTAATGTTTTGGTGG
TAAATTGGTCTTGTTAGCTTGATATTTCACGATGTATTAATGGCACAATA
CAAGACGACAACAAAAACAGAAGAAAAGCAGCCTTACAACAGAATGATCA
AATTCAAATTTGAATTTCTCTTAAATTTGCTTCAGACCTTCAAGTACGAC
CGTTTCCTGGAGAACGGTATGGAGAAGACCACGTTCTACAAGAAGGGCCG
GAAATTACGCTACTATCTCCTGCCCTTCGGCCATGGCGTCAGCATGTGCC
CCGGCCGTTTCTTTGCCCTGAACGAGATCAAGCAATTCGTCACCATCGCG
GTCTGCTACTTCAACATGGATCTCCTGGAGAAGCACACTCCTCCCCAGGA
CCAATCTCGGGCCGGGCTGGGGACTCTGGCTCCTCTGAAAGATTGTCTGT
TCCGCTACAGGCTCAAATAGGTTCTCTTCTGCGAAACTCCCTCTGCCGGC
ATTAGGGAACCTTAGCCCATGTGTATGCTTTGGCGGAGTGATAGATGCGT
TACAATCTGTGTGTAACGAAAACGTAAATGCCCGCTCCCTCTAGGAACCC
GGCGGATGTTGGGCGGGTCGCTATATCTAATACAAGCGCGATTTAAACAG
GCTAGAAGCTTACTTGCGTACAATGAGCTACAAACTACGAAATAGGAAAT
CAAACTTTCACGTTGTAAACAATAAAGGCTAATCTAAGTAAATATGCAAT
ACAGTCAGGTTGTTATAGTCAGGTGGGCTAATTGTGGGTTTCAGAATCTA
TTTTTCTAAGACCCCGTTTCAATTTGGCGACGATTGCTGAGTGACCTTTA
AGCGAAAAATGGATATGTGTGGCCCTTTATCTTATAATTGGAATATTATG
CACGATGCAAAATTATGATTTGAAATACAACAAATCGTTGAGCGATCTAT
CAAATAATGTTTGGTCGCTCAGCGGTCGCAGCCTCTAGTGGAAAGTGGGT
GAAATCAATGTTTTATGAATTTACCTATTGTTGCACTGTGAGTGTCCTGA
ATGTGCAGTGACACTGCAAAAAGAACTGTCTTGACCAGTCAAATACTATA
GCTAAGCTTAGTATACAGTGACTACGTTGATCTTTAACCGCTACGATGCC
ATTCTACTGGGTGAAGACGAAAGCTCTCTCAACCAACAGCCTCCCGGCCC
CCTTCTCTTACCTCTCCACATGTTATGTTGTAGTAAAGATATTTGTCAAT
GTGATAACACATACATGTACAATAATCATGCAGCGGAGAAATAAATGTTG
AAATCGACTAAGATATCGGCTGTATGTACGTTACTCTGTGTGTACCGGTA
TAACCAAGGTATTGATTCCAATCAGGTAAAACAGTTTTCTCAGAAATTAT
TACTTCGGTGATTCATCTTTTTCTGTTCTGTCGGGTCAGTCCGAGAANAA
GACGACAACAAAAACAGAAGAAAAGCAGCCTTACAACAGAATGATCAAAT
TCAAATTTGAATTTCTCTTAAATTTGCTGTAGACCTTCAAGTACGACCGT
TTCCTGGAGAACGGTATGGAGAAGACCACTTTCTACAAGAAGGGCCGGAA
ATTACTCTACTATCTCCTGCCCTTCGGCCATGGCGTCAGCATGTGCCCCG
GCCGTTTCTTCGCCCTGAACGAGATCAAGCAATTCGTCACCATCGCGGTC
TGCTACTTCAACATGGAGCTCCTGGAGCAGAACACTCCTCCCCAGGACCA
ATCACGGGCCGGGCTGGGGACTCTGGCTCCTCTGAGAGATTGTCTGTTCC
GCTACAGGCTCAAATAG Coding sequence (CDS) from alignment at Sc0000078:920697..928813+ >Blg00403.0 ID=Blg00403.0|Name=Blg00403.0|organism=Branchiostoma lanceolatum|type=CDS|length=1488bp|location=Sequence derived from alignment at Sc0000078:920697..928813+ (Branchiostoma lanceolatum) ATGAGCTTTGAGCTTGAATTGTCGTACCTTGCAACTAACCCCCCTCCCCT TCCCATCCCTCATTCCCATAGGAAACCTGGTGAGCCACCCCTGGAGCCGG GTCCTCTGCCTTACTTAGGTGTTGCCTTGGAGTTTTCCCAAAACCCCCTG GGCTTCATCACGTCCCGTTGGAGGAAATATGGCGACGTGTTCACCGTGCG GCTGGCCGGCCACTACACCACGTTCGTCCTGGACCCGCACTCCTTCACTC ACGCCATCCGGAACACCAGGGTTCTGGACTTCCGAGTGTTTTCCAACAAG ATAGCCCATCGCGCTTTCGGCACGCCGATAGTGTACGGTACCCCCCGCGA CTGGGTCCGAGCCGACAGTGATGCGCTGTATCCACAGGAACTGCAAGGAC AGGGTTTGGACAAGGTCACAGAGGTCATGATGGGCAACCTTCAGTCCGCC ATGCTGGCCGCCACAGACGTGAAGGCGGAGTGGAACAGAGGAGAGCTGTG GTCTTTTGTGTACAGGATCATGTTTAGTGCGTCTTACAAGACGCTGTTCG GGGGACACAAAGAACATAAAGACGAGACAGCACGACTGCTCCACGCCATG GAGGAATTCCAGAAGTACGACAAGAGGTTCCCAGAGATCATTTCGAACGT ACCGTGGTGGCTCATGGGACATACCAAGAAACGATATGGATATCTGAAGT CCATGGTATCTCCGGCTGAGCTCTGTCAGCGGGACGTCTCTGATTTCATC AGAATGAGGCAAAAGATCTACGGTGACGGAAATCTGTCTCCTGACGAAAC GGCGGCTTTTAATTTCGGAACCATGTGGGCCTCGATGAGTAACACCGTCC CCGTGGCCTTCTGGACCTTGTACCACCTGTTGAAGGATCCTGTCGCCATG GATGCAGTCAGGGTAGAGGTAAACCAGGTTTTGAAGGAGACCGGACAGAG TTTGGAAAATGTGAAGAAAGGGGACAAGATAGTTCATGTGACGAGACAGC AGTTGAATGGCATGAAATGCCTTGGCAGCGCCATCAACGAGGCACTGCGC ATGTGCAGTGCTTCTATGATCATCCGTGTCGCCACCGATGATGCTGAACT GGCCTTGGAATCCGGCAGTACCTTTCGTATCCGCAAGGGAGACAGGGTGG CTCTGTATCCAGGGTTTCTACACATGGACCCCGAAGTCTTTGACGATCCT GAGACCTTCAAGTACGACCGTTTCCTGGAGAACGGTATGGAGAAGACCAC TTTCTACAAGAAGGGCCGGAAATTACTCTACTATCTCCTGCCCTTCGGCC ATGGCGTCAGCATGTGCCCCGGCCGTTTCTTCGCCCTGAACGAGATCAAG CAATTCGTCACCATCGCGGTCTGCTACTTCAACATGGAGCTCCTGGAGCA GAACACTCCTCCCCAGGACCAATCACGGGCCGGGCTGGGGACTCTGGCTC CTCTGAGAGATTGTCTGTTCCGCTACAGGCTCAAATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00403.0-exon-Sc0000078-1570713199:920697..920965 | Blg00403.0-exon-Sc0000078-1570713199:920697..920965 | Branchiostoma lanceolatum | exon |
Blg00403.0-exon-Sc0000078-1570713199:921366..921519 | Blg00403.0-exon-Sc0000078-1570713199:921366..921519 | Branchiostoma lanceolatum | exon |
Blg00403.0-exon-Sc0000078-1570713199:921700..921805 | Blg00403.0-exon-Sc0000078-1570713199:921700..921805 | Branchiostoma lanceolatum | exon |
Blg00403.0-exon-Sc0000078-1570713199:922439..922608 | Blg00403.0-exon-Sc0000078-1570713199:922439..922608 | Branchiostoma lanceolatum | exon |
Blg00403.0-exon-Sc0000078-1570713199:923110..923247 | Blg00403.0-exon-Sc0000078-1570713199:923110..923247 | Branchiostoma lanceolatum | exon |
Blg00403.0-exon-Sc0000078-1570713199:925175..925264 | Blg00403.0-exon-Sc0000078-1570713199:925175..925264 | Branchiostoma lanceolatum | exon |
Blg00403.0-exon-Sc0000078-1570713199:925426..925522 | Blg00403.0-exon-Sc0000078-1570713199:925426..925522 | Branchiostoma lanceolatum | exon |
Blg00403.0-exon-Sc0000078-1570713199:926567..926745 | Blg00403.0-exon-Sc0000078-1570713199:926567..926745 | Branchiostoma lanceolatum | exon |
Blg00403.0-exon-Sc0000078-1570713199:928529..928813 | Blg00403.0-exon-Sc0000078-1570713199:928529..928813 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000078 | genome | Sc0000078:920697..928813 + |
Properties
Property Name | Value |
GeneID | Blg00403 |
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