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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:692739..697072+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00317.0 ID=Blg00317.0|Name=Blg00317.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4334bp|location=Sequence derived from alignment at Sc0000086:692739..697072+ (Branchiostoma lanceolatum)
ATGTACATGTTTCCAGGCGAGGACCTGTCATTGTCCGAAGGTCAAGTGCG
GACGAGGCGGTTCGTTTTCAACAGACCTGTTGACGTCAAGTATTTCCTCC
ACACACGTCAAAACAGAGGAACTCCAACAGTTCTGGAGGACAACAACCCC
GACGTGAGCGGCACCACCTACCGCAGTGACCGCCCAACCAAGTTCATCAT
CCACGGGTTCCAGAGTCGGGGTGATGCTCAGTGGATTCTGGATATGGCCA
ATGCACTGCTGGAAGAGGTAAGTCAGCGATACATCAACCGATCAATCAAT
CAATGTTTAACCTGCATGTAGTAGTGTCAATTTATTTTATTGATGCAGTT
AACAGTTAGCAACTGAAGAAGCTTAAGCTTGACGTTTCTAAATGTGTTCA
CTTTGGAATTCCTGTGCTTGACCAAACAAACTTAACAAAATCAAAAATAG
TTAGTATTTTTCGACGTTGCCCTCTTAACAGGAGGATCTGAACGTGTTTG
CTGTGGACTGGCGGGAAGGCGCCAGCCCAGGGCTCACCGGAAAGAATTAT
CTCCAGGCGAGGAGGAACTGCCGGAGGGTTGGGCAGGTGAGCAGATTTAT
GATGTAACATGTTTTCAAAGCGGCGTCATCCAAAAAACGCAAAAGCCATT
TTGTGACAACTACAATGCAACGTTTGCTAATGATATAGCTGACTTTTGCA
TGCTACTGTGATACAAAGAATAGCAGTCAATACTACAGAGCTGAAGAGGT
GGCAGTTTGATACATGCCTCATTCAACAGATGTTTTTTCCTAATTTCTAA
AGACTATTGCAGAGTTTGTGCGCCGTCTGCGACAACCCCAGGACATGACC
CACATCATCGGCCATAGCCTCGGAGCTCATGCCGCGGGGTTCGCTGGGAA
GGCTACACAGCCTGGACTCACGCTCGCACGAATCTCCGGTATTTTCCATG
TCGTTGTGTATTTGTACATTGCACCTTGTGGATATCGACGTTACGTATCA
TCGGAAATATCTTCTATCTGAAGAGAATATCTTTCCCTCTATCCCTAAAA
AACTGGTAGCGAAAGTTATTTTGATGGTTTACTGTCACATGTCGCTTTGT
GCATAGGTTGTTAGAAGAAGTTCTGTTAGTTTCTTGATATTTCTTTGATC
ATCATAGAAATAATTTAAGACGAATATGCATTTTTCATAACATCCATATC
AGGACTTATCACTTGGCTTTTTTTAATTATTATGTGTTGTGTTATGTTTG
TTACCTTCCGCTAAGAAGGTTTTGTTTTCTGTTTTCTTATCATGAATTTG
TTTTCCGACTGTCGTCCAGCTGAAGCCTGCTATGGGTTACATCATTTTTT
CACAGATCTAAGTCCGAACGATGGCAATGTTGATTGGCTACTTAGTCTGT
GACCATTATTTTTCTGACGCTATCATATCCGCCTGTAGGCTTAGACCCAG
CAGGCCCAGGGTTCAGACGCGCTCGTGCCAGGGACAGGTTGGACAGAGGT
GATGCCATGTTTGTTGACGTCATCCACACCGATATTCTCGTGTTGGGGAA
ACGAAAGCCAGTCGGACACGTGGACTTCTACCCGAACGAAGGATGGCTCC
AACCCGGGTGCAGACGTGAGTGAACGTGATTCTAAAAACAACGTTTTTCG
CAGTGCCAGGTTAACGTTATGATTTGTAAGATTCGATGTCCAGTAACATC
AGAAGCACGGAAGGGTGTATATTTTGTATAAACGTCTATGTTCATTAAAT
GATAATATGATGGTTGCTTGTAATCAGGAACTGCTGTATTTTAGTGTTAT
TGGTGACACAAGCACTTTTAGTTAGCAACTTCGTATGTCTCTGGTATAAT
CCTTTTTAAACTCAGCCACAGGGATCATGCGCGCTTCGTCGCTTTTCATA
CTGCTTCTGTCAACATTTCGGCTGATCTTTTGCTTCATTCTCCAGGGCAA
TATTGACTTGTTCTACTTCCCACTGCAGCTAGGTGTCGCTGCAGTGGGAA
GGATGCGGTGCCAAACGTTGGCGGGTGAATGTCTCCTGTGTACCAAAACG
TCGCGTTGCTAGCCACCCAAACTCGGATGAAACGATTCACGGCTGTTTTT
CGGTATCTCTGCCCATTTCTGATGTTTTTGTAGGCTTCAGCTGCAGCCAT
GGTCGGGCACCCGAGTTCTACATCGAGTCTATCAGCTCGGAGTGCCAGTT
CCAGGCCTACAGCTGTCCGGACTGGGAGACTTTCAACAGAAACCGCGGAC
AATGTGTCCCCTGCAACCATGCCGGTCTAGTAAATGGGTAGGGCGTCACC
TTCGCTAAAAAGGTTTACATTTTTGGTAGCGTCTGTGTGTGTCAATTGAT
TTGTTGTTTGATAACATAGCTCAAGAACGTCTGACGCAACTTCGTGAATT
AATTGTTATCGAATTCGGTACACAGCTTTGTTTAAGATTAGACGTCTTGC
TCTTGATCAACGTGGCTGTTTGATAGTAGTGTCTTTCTTTCACAGCGCAT
GCTCCATGATGGGGTATCCCTCCATCAACTATCGTGACTCAGACTCACAA
GGCAGCATGTACCTGGTGACAAGTACGGACCTTACACCCCACTGTAGTAA
GGAACTATCTTTATTTCATTTCAAATGTTTATCCTGTAGGTTAGGGACGG
AAACAAATAATTTTTATTGTAAGTGTAACGTTACAAGAGATAAATATCGA
CAGAGAAAAGACTAGTTCTAGGTTTCCTCTCGATTCACATAATGAAACAT
TTGTCACCACCCCTATGAACAACTTCACAAGAACGGTAATTCCTATACTT
CCTTCATTTTGATATCCTCTAGCCTATAGTATAAGGCTAGGATTCCCGAG
CTTAAACAGAGTAAAAACATATTGCACATCACAAGGCACACACAAACATA
CATGCGCATTTAAACTGACGTGTGTATAATTGACGAAGAGACGGCCACGT
AGATACTGAGTGAAGACAGACACCGAAGAGTTGTTGTGGCCGATGGAAGA
GAACTTTCAAAAGTCTAAGTTACTCTCTTCACTATATCTCTTATGGAGCA
CATTAAACGGTACCTGTTTTCATATGTTTCGCAACAGGACGAATTCTGAG
AAATGGATTCATGATACTGCATTCTTCAAGATCAGTCATTTAGGGCACTG
GTGTGTCGGACACGTTTTACACTGTCATGTACATAGTGCATTTCTAGGAA
ATCCATCTAATCACACAAACGGAATTGACAAGCGCAATATTACACACGTG
TATCAGGGACCCGTGGACGCCGTGACACAGAGAGCGGTGAGAGTGAACAG
TGTGTGCAGTCCCTGGGTACAGACATGCGGGAGGAGATACTGGACTTAGT
GGACTCCATCACAGACCTGGGGCAGATGGGGATGGAGGAAGATTTCTGCA
GGTAGGTCCTTTCTCTTATTTACTTTTACTTTTCCTTCCGCTTGTACCGT
CTTTTGTACATGTTGCGGTGAGTTGTAATTTTTTTTTCCGGTTGCAAGTT
GGGTAGCGTGGAATTGATGCTGTCATGTAGGAATGAAGTCATTTATATTG
TCTTTTATATTGTTAAGTCGCAAATATCAAGTACATGTAATGTGAAACCC
AGTCATGAACGTTCTATTTTCACGAAGGAAAACGTTGCAAAAAGTGCCTC
AATTCAAGTTAATGCTCTGACGAAGTAGTCCCGTTCAGTGCCTAATACTT
CATCGACACTCGTGTCGTTAAGAATCTTTTCACGTTGGTTTAATATTGAT
CTTACATATATATATACATTTATACATATTTACAGTATGTATTCCAACAT
GGAGACTGATGTGGCTAACATCACAGCATCGAATCCCAACTGTGGACCCG
AGGATATTCCTGTTATCCTGGAGTACATAGCAGGTACGTTATGTAAATCA
TTCCGGCAGTTCAGGGGTACGGTGGCCCGCTAGGACAACTTTCGACGAAA
GCCACGATACAGTGGCGGATCGGGAAAACTGGGACAAAAACGAATTAGGA
CTAATCGGTAGATTGGTGAAAGAAATTTTTCATAGGTAGCCATATATCTA
AAGGTGCAACGTTACACGAATTCAATACCATGATCTTGAAACTGACCAAG
CTATGTTGATTTTGACATTGTAGAAATGAATGTCACTGTGTGTCAGTCCG
TAACATCAAGATCTTTCGTCCTACCGCAGACAGCAAGTACGACATCGTGA
TGGCCTGGGCGGAGGACAAGTGCCCCGTGAGCGCCAGTGATGGCGGCTCC
ACTCTCCCTTCGGCAACCATGGTCATCGCGCTGCAGCTCATAGCGGCTGT
CGCTGTGGGGTGCTGGCGTATGGAACTCCCGTAG Coding sequence (CDS) from alignment at Sc0000086:692739..697072+ >Blg00317.0 ID=Blg00317.0|Name=Blg00317.0|organism=Branchiostoma lanceolatum|type=CDS|length=1338bp|location=Sequence derived from alignment at Sc0000086:692739..697072+ (Branchiostoma lanceolatum)
ATGTACATGTTTCCAGGCGAGGACCTGTCATTGTCCGAAGGTCAAGTGCG
GACGAGGCGGTTCGTTTTCAACAGACCTGTTGACGTCAAGTATTTCCTCC
ACACACGTCAAAACAGAGGAACTCCAACAGTTCTGGAGGACAACAACCCC
GACGTGAGCGGCACCACCTACCGCAGTGACCGCCCAACCAAGTTCATCAT
CCACGGGTTCCAGAGTCGGGGTGATGCTCAGTGGATTCTGGATATGGCCA
ATGCACTGCTGGAAGAGGAGGATCTGAACGTGTTTGCTGTGGACTGGCGG
GAAGGCGCCAGCCCAGGGCTCACCGGAAAGAATTATCTCCAGGCGAGGAG
GAACTGCCGGAGGGTTGGGCAGACTATTGCAGAGTTTGTGCGCCGTCTGC
GACAACCCCAGGACATGACCCACATCATCGGCCATAGCCTCGGAGCTCAT
GCCGCGGGGTTCGCTGGGAAGGCTACACAGCCTGGACTCACGCTCGCACG
AATCTCCGGCTTAGACCCAGCAGGCCCAGGGTTCAGACGCGCTCGTGCCA
GGGACAGGTTGGACAGAGGTGATGCCATGTTTGTTGACGTCATCCACACC
GATATTCTCGTGTTGGGGAAACGAAAGCCAGTCGGACACGTGGACTTCTA
CCCGAACGAAGGATGGCTCCAACCCGGGTGCAGACGCTTCAGCTGCAGCC
ATGGTCGGGCACCCGAGTTCTACATCGAGTCTATCAGCTCGGAGTGCCAG
TTCCAGGCCTACAGCTGTCCGGACTGGGAGACTTTCAACAGAAACCGCGG
ACAATGTGTCCCCTGCAACCATGCCGGTCTAGTAAATGGCGCATGCTCCA
TGATGGGGTATCCCTCCATCAACTATCGTGACTCAGACTCACAAGGCAGC
ATGTACCTGGTGACAAGTACGGACCTTACACCCCACTGTAGGACCCGTGG
ACGCCGTGACACAGAGAGCGGTGAGAGTGAACAGTGTGTGCAGTCCCTGG
GTACAGACATGCGGGAGGAGATACTGGACTTAGTGGACTCCATCACAGAC
CTGGGGCAGATGGGGATGGAGGAAGATTTCTGCAGTATGTATTCCAACAT
GGAGACTGATGTGGCTAACATCACAGCATCGAATCCCAACTGTGGACCCG
AGGATATTCCTGTTATCCTGGAGTACATAGCAGACAGCAAGTACGACATC
GTGATGGCCTGGGCGGAGGACAAGTGCCCCGTGAGCGCCAGTGATGGCGG
CTCCACTCTCCCTTCGGCAACCATGGTCATCGCGCTGCAGCTCATAGCGG
CTGTCGCTGTGGGGTGCTGGCGTATGGAACTCCCGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00317.0-exon-Sc0000086-1570713199:692739..693005 | Blg00317.0-exon-Sc0000086-1570713199:692739..693005 | Branchiostoma lanceolatum | exon |
| Blg00317.0-exon-Sc0000086-1570713199:693220..693324 | Blg00317.0-exon-Sc0000086-1570713199:693220..693324 | Branchiostoma lanceolatum | exon |
| Blg00317.0-exon-Sc0000086-1570713199:693541..693676 | Blg00317.0-exon-Sc0000086-1570713199:693541..693676 | Branchiostoma lanceolatum | exon |
| Blg00317.0-exon-Sc0000086-1570713199:694177..694353 | Blg00317.0-exon-Sc0000086-1570713199:694177..694353 | Branchiostoma lanceolatum | exon |
| Blg00317.0-exon-Sc0000086-1570713199:694872..695025 | Blg00317.0-exon-Sc0000086-1570713199:694872..695025 | Branchiostoma lanceolatum | exon |
| Blg00317.0-exon-Sc0000086-1570713199:695234..695334 | Blg00317.0-exon-Sc0000086-1570713199:695234..695334 | Branchiostoma lanceolatum | exon |
| Blg00317.0-exon-Sc0000086-1570713199:695995..696139 | Blg00317.0-exon-Sc0000086-1570713199:695995..696139 | Branchiostoma lanceolatum | exon |
| Blg00317.0-exon-Sc0000086-1570713199:696524..696621 | Blg00317.0-exon-Sc0000086-1570713199:696524..696621 | Branchiostoma lanceolatum | exon |
| Blg00317.0-exon-Sc0000086-1570713199:696918..697072 | Blg00317.0-exon-Sc0000086-1570713199:696918..697072 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:692739..697072 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00317 |
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