BlTCONS00113771 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113771
Unique NameBlTCONS00113771
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000230:214439..222226-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113771 ID=BlTCONS00113771|Name=BlTCONS00113771|organism=Branchiostoma lanceolatum|type=mRNA|length=7788bp|location=Sequence derived from alignment at Sc0000230:214439..222226- (Branchiostoma lanceolatum)
GTCAAATCCAAACCATAATTGTCCACACACCTTATCAATTCCTACCCATG TTACTTACTTTATCTCCTTCTGTTGACATTTCTTGATTCTAAATCTTTAC AAGACAGACTGAAACCAGAAACTCAACTTGTAAATGGCATCTGAGGAAAT TCTTGGCCAAGCCTGGCTTATCCTTGACAAAACAATAACCCTCTGTTGAA ATCTGATCTGTCTGTTTTTCCAGTCATGCTTCCTGCTGGCAGGACACATC TGGGAATGGCGAAGGAAACCCCTAAAAGTGGTCTGTGGGCAGACTTGATG AGAAACACATTCCAGGGAAATTTTACAGGGTTCAAAAGGTTAGTAGTAGT CAGGCAGGAATCAGTGCGACATGGCCTCCCTGGTTTGCAGTGCTGTGGTC CTGGCTCTGTTCTTGAGTGGTGTGACTGCTCAAGATGGTGAGGAGGATGC TATTGCACTACCAGTGGATCCATACTATGACAGTGTGGATCCAATAGAGG AATATCCTCCCGGTGAGGACTACCCTCCCTATGATGACTACAGTGACCTG GATGTTGTGGTGACTGCACCTCCATTCCAGCCCACCCCTCCACCCAGACG ACAAGCCCCTCCGCCTGATCCTCAACCACCTGCACAGGTCCCTGCACCTC CTCGTGGCTATGACTACGGTTCAGAGTCGGACTACTACGACGGCTATAGC TATGAACGGCAGATTGAAGAGGACCAGAGAAGAGAAAGGATGTACCAAAT GGAGTTCCAGCTGAGAGAAGCCCTGGCAGAACTAAGGCAACTGAAGTCTC AACACTCAACAACGAGGCTGGTGGTGCAGAACATGAACAGCAAACTTTTT TCTGGTAAATATATCATCATCTATAGGATAAATAATGCATAATTGATGGA TAAATTATGAATTAGGCAGAACACCCATTCCAAGATTGTTTGCCTAAAGT TAGTTCAAGGCATGCTAGGTCAACATGTCAATCTCGTTAACTCTATGACC TCTGAGCTTGCCAAGGGTAAAACCATCTTGGGTTGAGTTAGACAGGGTCA GTGACCCATAATGATATGGTTTGTAATGTAAGGCTTTGTTTTGAATTTTG CATTTTAGAAATGTTGTCCTTTCTTCTTATATCAAATATTGTAGTTCATT GACAGAATGCAAGGATTCGTAATCTTTGATGCTGTATGATGTATTTTCCA AGGCCCAGCAATAGAAAAAAAATCTTCATCTGTAATGCTAGGAAAGCTGG CCATTCTGGTTGATACCAGTAGATTTATAGACTAACACCTGATTGTGAAC GCATTGCATTATCCTAATGAGCCTGCCCAGGAGAAAAGGAAGTTTAGGCT CCTTATAACTTCCTTGGTTCATAATCTTCAAAGATTTACTTTACTTACTT ACTTTCAAAGATTTAAAACAATCAATTGGTGCTAAGTTTGCAATTTTTCA CAAATCTTGGCACAGTGGTATGACCGGATGTACAGTAATGGCTCAGATCC CAGATGAAAGTATGTACAAACATGCCAACAACTTCAGGTTTTAGATTAAA ATCAGGCAGATTCAAGGACAATCTATGGGGGGGCCGTAAGAGAAGATTCT GCCAAAAGTAAGAGATTAGCTACCATCACCTTACTTAACACAGCAGTTGT CCGGCTGGCTGACAGCACTAATAGCATGATTTTACTGTTGGTTGATACAG CAGCCTGGTAAGTTTGCATCTGCTCTGAAAGGTAATAGCACCAGGATGGT ACCCACTACTCAATGCCCCAGTTGTGATTGTTGCATTATCTTGATATAGA CAATAACTTTATATGAAGAAAAATGTAACATACACATGTTTAATAACCTT TTTCCATTCTTCAAGATATGCTTCCCAGCATGAATGAAAAAGTCAATGAA TTTGGGAGAAAGGTGGAAAAGAGTGGAACAGATATTGCAAGGTAAGTATT CCTTCAAAACAGATATATTCCTCCCGTCCTTGTCAGTCCATTCAAGGGTG ATTGGTACTGGCTTTGAATCATTCAAAATTGGATGATTTCGCTGTTATTC TGCATTAAGCTAACCTGGCAATCTGGAAAGTTATGGTAACCATACCAATG TGAGCTTGCAGCTATCTCTAACTAGTCTAAGAGTGCTGCCTGCCTGCCCA GTTCATTGGCACACACTGTGGAATTTTAACGGGGTTTGTATCAATAATAT CGCTCACTCAATCAGGAATATCTCAAAACGTCAGCTGAAAGACAGGCTGC CAAAAACAAGCCTATGCTTTGCAGACTGACTAAACAATCCTAGCCTGGAG AACAGTGGCCAAGCTAGCAATAACCTCATTCATACTCTTTATGAAATGTT AACCATGCAAGACCACTGCAACGTTAGACATTTCTAGATGATCTCCATTT ACATGTAACAATACCTTTGGTCCTAAAGATACAACCAGCGCCTGACAGAG ATAGAGCAAGGCATGGAGGAGAACAAACTACTTGGATCTACTGTCACATC TATGGAGCAGAAGACCAACAGGCTGGACAACATGATCAACGAACATGACA ACAAGCTGCTGAGGTTGGAGAACATGTACAAAGGCACCATAGCTCGCCTG GAGACACGCCTGTCACAGGTGGAGAGTAACACTGGTAAGGAGGCTTTTCA CTGGTGCACTCACTGTATATGCTGTAATTAGCCAGCAGATCACAAGCAAA CTATTACAGCAGCAGATCTATGTACAACATGAGATGATAAGCTATTGCAT CCTCCTATTCTGCTAGGATGCCTATACTTTCAGATGAAACATGTGGCTTA CCTTAAGTCCAAGTTAATGCACGCGCAAGGACCTCAGATTTGCACAGACT GGTTTTATATTACTCACCCTATAGCTAAATAAACAGACCATGTAACAACT GCAGGGGTGCTACAAGGTCTAGTCCCTCCTGTGGCCTTGGTAATGTGTGA AGTTGGGGTGTGCATGTTAATCAGTTCCATGTGTCCCCCCTCCACCCAGC CGACCAATGGTATAACATGGAGGAGTCTGTACTGGGGCTGGAGAAGCAGG TCAAGAAGCTGGCTGCCCGTCCTGAGAGGGAGGACCAGGCCGCCAGGATA GCTCAGGTAGCCTTGTTGTATAATTACAGACAGCGGGTACCCATCTGAAT AATGAGGCTGTTGTATCCTCCTTGATGGCACCTCCTCGAACATGGGACCC CATTTAATGTCCCTTCCAAAAGACGTGCAGCACCTGCTAGGATATCCTTC CACTGATCGTCTGTTTCCACAAAAAGAAATGAATAATTTGACCATATTGT GAATCGTACAAAGCAGCTGCAAATTGAGCAAATATATGCTATATGCCTTA CATTGCAAAAAAAAAAAAAATTGGAAAACGGATACTAATGTCCTGGTATG CTTAAGTCAATTCCAAAGAAAAGAGTGAAAGAACAAAACTGATGAATCTA TTGTGAGGTATACCATAGTCTTGTGTGTTTAGTCATTTGTTCAACCTTCC TGCCTGACCACTTTGATTTCATAATGAAAGCAACTTTCTTTTTTGCCAAA CTTTTTTCTCTTTGCAGTTTTGGGGTTCCCAGAGGATATCATCCCTATTA TCGAATCAACATGGCCTTAAACATTAATTTCTTGGGTCAGATGGCAGTTC CTAAGAAGATCTAATCGAGAACTGTCCTTGATAACATTGTTTATGTTGGA GGGGTAATTGATTAGGAAAATGAAAACAGCCTATCATAGAAGCGGACTGC ACCATCAGGGAGGTGCAAAAGGGAACAACTCTGGGATATGCTGTCTCCAA TGGTTGTATTTCAGTCAGGTACTCATAACTCCAGCATGAAGACCTTGTGT GGCATATGTTGCACTTATTATTCGTTTGGTTTCACAGCTGAAAAGACAGT TGTTTGACACAAACAACAAGGCCACTTACCTGGAGAGGCAGATCAACAGC AATGACAGGGACATCGCAAAGACTGATCAGAGAGTGAAAGAAGTACTGAG GATGATGCAATACCAAGGGTATGTCTTCCTTTAACCTACTACCTGCCGGC TAACCCCATAACCAGTACAGATTTGGTGCCGAACAGCTACCTTAGTATTT AGAGATAACTGATCACCATTACAAAACTTATACTTTTATACAAGACAACA AGTCTCCCCCAACACACATGCATGTATATGTACTGTACTTCAAAAATATT TTGTAGCTAACATCACCAGTATGATTGTCTGATTTGCTTCTAATTTTTAC AAAATATTCTACTTTTGTGTCCCCTTTCCATCTTACAATCCAGTTAGTAA TCATGATATAATGACCTATATTTATTCAAATCATTTATAGATTTGACTCT TCCAGGTTCAGTCAAGCACCAGAGCCTCTGTGATACCATGTACAAACACC CCACAGATTCTAAGTTGTAAAGACAGAGGCTTGAAAGCCATCAATGTTAA TATGGATGTTATCAAACAGGTCACTTGAAATAAATTTTGGAGAAGTGAAT ACCTGCAAGCCGCCAGGCTCCATGACACTGGGCGGGGGAACATCGTTAGA ACATATTCCATTCTTAACGGACGTGTGCAATGACACAGTTTGTGTATAAA ATCCCCCCTATGACGAAATGCTTTTGTGTTGTTCAAATTGGTCTATTGTA CTCATGTTGATCCTGGTGTGTGTAGTCAGGAGCAGGCCCGTGGTGCTCCC CTGGCGATACAAGACGAGTACATCAACAAGATGTCCCAACTGGAGACACA GTTAACCCAAGACAGAGGCAGGTCAGTTTGAGTTTGTCTTATCAGTATGT CAACACCTTATCTTCCTCAGATGTCTCCTATGATGATGAGAATTGTTGTA CATTTGTGTTGTACAGATCCTCTCCCACAGAGCTGGGAGATGGCTTTGTT GGGGACCTAGGTGAAAACCTGTACAACATAGATTATGGATTTTCAAATCA TAAAACATTAATCATTGGCACTGGCTTTTACCAAATGTAATTTGAAATGC TTGTTTCTTGTTACTCATCTGATTTTTCTTCAGGGTTACATCGTTGGATC AAAGATGTAACATCTTGGAGCGCCAGCTGGGGGCCTACTCACAAGCATTC AACCAGATTAAAGACAAGGGCTGCTGTGATGATTTGGATGTCACATCACT GCCTTCTGGGATCCCAACAGGTCCACACACTTATACTTCCTTGGTGGAAA ATATAAAGTAGTAAATGCCTGCCCTAGTCTTTAAATGTAGCAATCCATGC AAGTATTTGTGTATTNTGTTGGGGACCTAGGTGAAAACCTGTACAACATA GATTATGGATTTTCAAATCATAAAACATTAATCATTGGCACTGGCTTTTA CCAAATGTAATTTGAAATGCTTGTTTCTTGTTACTCATCTGATTTTTCTT CAGGGTTACATCGTTGGATCAAAGATGTAACATCTTGGAGCGCCAGCTGG GGGCCTACTCACAAGCATTCAACCAGATTAAAGACAAGGGCTGCTGTGAT GATTTGGATGTCACATCGCTGCCTTCTGGGATCCCAACAGGTCCACACAC TTATACTTCCTTGGTGGAAAATATAAAGTAGTAAATGCCTGCCCTAGTCT TTAAATGTAGCAATCCATGCAAGTATTTGTGTATTCATTCATGATATCAC CATTGATCGAGAGCCAGAACAACTCTGCTCCGAGAGTTACAGGTAGGCCC ACTACGGCTGAAACCATGTGTTCTTTCCAGCAGTTGACCATTGTCTACCA TCAATCCTTTAAACAACATGAGTCTTAAGTGATTAGTTATGTCAATGCTT GCAGCAACTGATGGGTACATTGTCTCCCCATTTAGAACAATTCACTTAGG TTTTTATACTTGACAACCTTTATATTTGTATTGCATTTAGTTATAAGTTC TGGAAGGTTCCCCGAGACTGGTGGTAGATCATCATCGGGTCTAGATCTGG ACATCCCAGGATTCTCTGCTCCTCGGGCCAACGTAAATGAGGCCGTCCCT GCTCCTGCTCCTGCCCCAAGACCGGCCCCACCTGTCACCTTCAACCAGCC TGCCCCCGCTCCACCACGTTCCCAACTGTCCCTGCCAACACAAATCCCAT CATCCTTTGAGGACCAACAAGGAGGGGCATCAGAAGTGGTCCAACCAACA GCCCCACCTGCACCCCCCAGAGGTCGCCGACCCACGGGTGGGAGGAGGGA CCCCGAGGTGCCAAGCACCCCACGGAGAAATGGCAACAGAAGGGAGAGAC CAAGGAAGCCAGAGGCACCACCACCACGACCACAACCACCACCACGGCCA CAACCACCACCTGTACCTCCACCTGTACAACCACCAAGCCGGAGTGTGGA TTCAGAATATGAAGGATACCCAATCGTGCCAGAAGTCAGCAGGGCTGAAC TCGGAGAAATCAAACCAATAGACTGCTCAGAGATATATGACTATGGACTT GAGGCCAGTGGTGTGTACTACATCTACCCCTCTACACTAACCCAGCCTGA GAATGTGCCTGTGTACTGTGACATGACTACAAACGGTGGTGGGTGGACAG TGTTCCAGAGAAGGCTGGACGGGAGGGAGAACTTCAACAGGAATTACTCA GACTACACGAATGGTTTTGGGACTCCAGTAGCAGAGTACTGGCTGGGCAA CACGATCCTGCACCACATCTCCCACCAGGACGATTACGCACTCATGGTGG AGCTGGAGGACTGGGAGGGCAATGTTGTGCACGCCGACTATGACCAGTTT ACTGTTGGTGATGAAAGTCTCAAGTTCAGACTGAATCTGGGAAGATACAG TGGAACTGCTGGTGACTCGATCAGAGGTAAGAGAAGAACATTTACAATGC ATCATACATTTGTGCAATCTAGTAAGTTCTTGACATGGTGAATTTCTCTC CTTTGATTTACCAGTGAATAGATATTCTATATCAATGGAATAAACCAAAC TCATGATATCTACCACAATTCACCTATCCCTTGCAGGCAACACACTCAGT GGCAACAACAGAATGCCCTTCTCCACATACGATGCTGACAATGACAAGTC CAGAGCCAACTGTGCCACCACTCACAAGGGAGGCTGGTGGTACAACCAGT GTGGGGACTCCAACCTGAATGGTGTGTACTACTCAGGAGGTGTGTACGGA GGTGAGGCCGACGGCATCTACTGGTACTCCTGGAAACAGGACACCTTCTA CTCCCTTAAGAGGGTAGAGATGAAGATCAGACCAACTTACTTCTAAAACA CACCAGTAGTGGGTTCAGCTAGCTTTCAACTTTCATTCATATACCAGAAA TGATAAACTTATAGCCAGTGTCATTCTAATGAATTGTTCAGCTACTGTTT TAGAGACTATTTTATAAACACAACATCTATAGAGACAGTTGCAAAAATAA AAGGGTGGTGAAGGAAAGATTAGTTCTTTATTTTTCCTGAGAGTATAAGT TGAATGTGGCAAGAAATACTTAACATATAAGTACATGTATATCACACTTT GTTCTGCAACATTAGTCTTTTCTCACTGAAGAAAAAGTAATGATGATAGG TGCCTCGTAGCTCTTCTACCAAAGATCTAGACCACATAACTACACGTAAT TATAGAGGATACTTTCATGATTGTAACTGAAAAGTCTATGTTTTCCTGAC ATAACAGTTTAGTTACCATTGACATACATGTACGCATATAAGTGTTAGTT AACACTTACATATGTACTCTTCTGCTGTACACTTGCGGTTGTATTAAGAG TTCTGAAGTGCCTTCAAAAGGCATAAATACATCTATCC

Coding sequence (CDS) from alignment at Sc0000230:214439..222226-

>BlTCONS00113771 ID=BlTCONS00113771|Name=BlTCONS00113771|organism=Branchiostoma lanceolatum|type=CDS|length=2433bp|location=Sequence derived from alignment at Sc0000230:214439..222226- (Branchiostoma lanceolatum)
ATGGCCTCCCTGGTTTGCAGTGCTGTGGTCCTGGCTCTGTTCTTGAGTGG
TGTGACTGCTCAAGATGGTGAGGAGGATGCTATTGCACTACCAGTGGATC
CATACTATGACAGTGTGGATCCAATAGAGGAATATCCTCCCGGTGAGGAC
TACCCTCCCTATGATGACTACAGTGACCTGGATGTTGTGGTGACTGCACC
TCCATTCCAGCCCACCCCTCCACCCAGACGACAAGCCCCTCCGCCTGATC
CTCAACCACCTGCACAGGTCCCTGCACCTCCTCGTGGCTATGACTACGGT
TCAGAGTCGGACTACTACGACGGCTATAGCTATGAACGGCAGATTGAAGA
GGACCAGAGAAGAGAAAGGATGTACCAAATGGAGTTCCAGCTGAGAGAAG
CCCTGGCAGAACTAAGGCAACTGAAGTCTCAACACTCAACAACGAGGCTG
GTGGTGCAGAACATGAACAGCAAACTTTTTTCTGATATGCTTCCCAGCAT
GAATGAAAAAGTCAATGAATTTGGGAGAAAGGTGGAAAAGAGTGGAACAG
ATATTGCAAGATACAACCAGCGCCTGACAGAGATAGAGCAAGGCATGGAG
GAGAACAAACTACTTGGATCTACTGTCACATCTATGGAGCAGAAGACCAA
CAGGCTGGACAACATGATCAACGAACATGACAACAAGCTGCTGAGGTTGG
AGAACATGTACAAAGGCACCATAGCTCGCCTGGAGACACGCCTGTCACAG
GTGGAGAGTAACACTGCCGACCAATGGTATAACATGGAGGAGTCTGTACT
GGGGCTGGAGAAGCAGGTCAAGAAGCTGGCTGCCCGTCCTGAGAGGGAGG
ACCAGGCCGCCAGGATAGCTCAGCTGAAAAGACAGTTGTTTGACACAAAC
AACAAGGCCACTTACCTGGAGAGGCAGATCAACAGCAATGACAGGGACAT
CGCAAAGACTGATCAGAGAGTGAAAGAAGTACTGAGGATGATGCAATACC
AAGGTCAGGAGCAGGCCCGTGGTGCTCCCCTGGCGATACAAGACGAGTAC
ATCAACAAGATGTCCCAACTGGAGACACAGTTAACCCAAGACAGAGGCAG
GGTTACATCGTTGGATCAAAGATGTAACATCTTGGAGCGCCAGCTGGGGG
CCTACTCACAAGCATTCAACCAGATTAAAGACAAGGGCTGCTGTGATGAT
TTGGATGTCACATCGCTGCCTTCTGGGATCCCAACAGTTATAAGTTCTGG
AAGGTTCCCCGAGACTGGTGGTAGATCATCATCGGGTCTAGATCTGGACA
TCCCAGGATTCTCTGCTCCTCGGGCCAACGTAAATGAGGCCGTCCCTGCT
CCTGCTCCTGCCCCAAGACCGGCCCCACCTGTCACCTTCAACCAGCCTGC
CCCCGCTCCACCACGTTCCCAACTGTCCCTGCCAACACAAATCCCATCAT
CCTTTGAGGACCAACAAGGAGGGGCATCAGAAGTGGTCCAACCAACAGCC
CCACCTGCACCCCCCAGAGGTCGCCGACCCACGGGTGGGAGGAGGGACCC
CGAGGTGCCAAGCACCCCACGGAGAAATGGCAACAGAAGGGAGAGACCAA
GGAAGCCAGAGGCACCACCACCACGACCACAACCACCACCACGGCCACAA
CCACCACCTGTACCTCCACCTGTACAACCACCAAGCCGGAGTGTGGATTC
AGAATATGAAGGATACCCAATCGTGCCAGAAGTCAGCAGGGCTGAACTCG
GAGAAATCAAACCAATAGACTGCTCAGAGATATATGACTATGGACTTGAG
GCCAGTGGTGTGTACTACATCTACCCCTCTACACTAACCCAGCCTGAGAA
TGTGCCTGTGTACTGTGACATGACTACAAACGGTGGTGGGTGGACAGTGT
TCCAGAGAAGGCTGGACGGGAGGGAGAACTTCAACAGGAATTACTCAGAC
TACACGAATGGTTTTGGGACTCCAGTAGCAGAGTACTGGCTGGGCAACAC
GATCCTGCACCACATCTCCCACCAGGACGATTACGCACTCATGGTGGAGC
TGGAGGACTGGGAGGGCAATGTTGTGCACGCCGACTATGACCAGTTTACT
GTTGGTGATGAAAGTCTCAAGTTCAGACTGAATCTGGGAAGATACAGTGG
AACTGCTGGTGACTCGATCAGAGGCAACACACTCAGTGGCAACAACAGAA
TGCCCTTCTCCACATACGATGCTGACAATGACAAGTCCAGAGCCAACTGT
GCCACCACTCACAAGGGAGGCTGGTGGTACAACCAGTGTGGGGACTCCAA
CCTGAATGGTGTGTACTACTCAGGAGGTGTGTACGGAGGTGAGGCCGACG
GCATCTACTGGTACTCCTGGAAACAGGACACCTTCTACTCCCTTAAGAGG
GTAGAGATGAAGATCAGACCAACTTACTTCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113771-exon-Sc0000230-1564993656:221373..222226BlTCONS00113771-exon-Sc0000230-1564993656:221373..222226Branchiostoma lanceolatumexon
BlTCONS00113771-exon-Sc0000230-1564993656:220286..220361BlTCONS00113771-exon-Sc0000230-1564993656:220286..220361Branchiostoma lanceolatumexon
BlTCONS00113771-exon-Sc0000230-1564993656:219593..219798BlTCONS00113771-exon-Sc0000230-1564993656:219593..219798Branchiostoma lanceolatumexon
BlTCONS00113771-exon-Sc0000230-1564993656:219121..219227BlTCONS00113771-exon-Sc0000230-1564993656:219121..219227Branchiostoma lanceolatumexon
BlTCONS00113771-exon-Sc0000230-1564993656:218209..218339BlTCONS00113771-exon-Sc0000230-1564993656:218209..218339Branchiostoma lanceolatumexon
BlTCONS00113771-exon-Sc0000230-1564993656:217456..217551BlTCONS00113771-exon-Sc0000230-1564993656:217456..217551Branchiostoma lanceolatumexon
BlTCONS00113771-exon-Sc0000230-1564993656:216687..216823BlTCONS00113771-exon-Sc0000230-1564993656:216687..216823Branchiostoma lanceolatumexon
BlTCONS00113771-exon-Sc0000230-1564993656:215401..216336BlTCONS00113771-exon-Sc0000230-1564993656:215401..216336Branchiostoma lanceolatumexon
BlTCONS00113771-exon-Sc0000230-1564993656:214439..215240BlTCONS00113771-exon-Sc0000230-1564993656:214439..215240Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113771BlTCONS00113771-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000230genomeSc0000230:214439..222226 -
Properties
Property NameValue
GeneIDBlCUFF055776