Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000112:412740..415909- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00088476 ID=BlTCONS00088476|Name=BlTCONS00088476|organism=Branchiostoma lanceolatum|type=mRNA|length=3170bp|location=Sequence derived from alignment at Sc0000112:412740..415909- (Branchiostoma lanceolatum)
ACAAGGCTTAACCAGGTGTCTTACTGAATATAACCAGGTGTCTTACTGAA
TATAGCCAGGTGTCTTACTGAATATAACCAGGTGTCTTACTGAATATAAC
CAGGTGTCTTACTGAATATAACCAGGTGTCTTACTGAATATAACCAGGTG
TCTTACTGAATATAACCAGGTGTCTTACTGAATATAACCAGGTGTCTTAC
TGAATATAACCAGGTGTCTTACTGAATATAACCAGGTGTCTTACTGAATA
TAACCAGGTGTCTTACTGAATATAACCAGGTGTCTTACTGAATATAACCA
GGTGTCTTACTGAATATAACCAGGTGTCTTACTGAATATAACCAGGTGTC
TTACTGAATATAACCAGGTGTCTTACTGAATATAACCAGGTGTCTTACTG
AATATAACCAGGGATAGAGAAGAACAAGGCCCGCCCCAGCCGCTACAGTG
AGAGTCTGGTGGGGGAGGGCGGACCCGGGTCCTACTTTAACGACTACTGC
AACTGGCGGAGCATCCCGGAGTTCCAGGACTTGGTGTACCACAGCCCAGC
CGCGCAGATAGCCGCGCAGCTTATGGACTCACAGGTATTCATCTCCATGA
AAAATGGAGATATAGTTTTTGGTGTGTCTGTCTGTCTTTCTATCTGTCTG
TGTGACTGCGCGTCTGTTCGTGTTTCCGCACTAGTGTAGTAACTCAACGA
CCTCTTGATGGATTACAATGATATTCGGTATGTGGGCAGGTGTTGTGAAG
CCGAAATTCAAGATCGATTTTGGACCCTCTGGCATGTGACATTGGTACTG
CAGCAGAACTTCCGTGTTTGTATCTTTTGACTTGGACGTGCTATGGTCTT
GTGTTTATTGTATCGGCTAACATACAGCCAGAGATGTTCAACTAGTCTAG
CCTGGAGCCCAGCCTTGCTAGCTTAACTGGTTGGCGGCTAGCGGACGTTG
GGAGCTGGCCGAAGCTAAGAAGGCTGGACTCCAGGCTAAAAGTAGTCAGT
GGCTGCATAGATTACAAAATAAAATATTAAAGTCACTTCCGTTGAACTGC
ACATGCCCTGTGTATATCAGCTTTAGTAATGCGATTGAAATTCTACCTTG
AACAGCAACATGTGATATTAGCGAAGATGCATAAAATCAATTCTAATCTG
TGGTCTCTCGCGGTCCACACTCACATCCGCATCTCCCTCTTTTCTTTTTC
TCTAACGTTGCATATTCAAATTAATGGCGGTGCTAATAAGATAATTCTGC
TCTACTGACAGACCATTTGAAACTCTGGTGTAATTTTCAGACGGCGGTAT
TCTACCACGAGCACGTTCTGACGAAAGACCCGGGCACCTACAAGACCACG
CCCTGGCACCACGACCAGGCCTACTACCCCGTGGACGGGGACAAGGTAAG
GTCTGTGTGTGCAAGTAAGTAAGCTGTATACATACATAAGGGAGACTACA
TCTATTGACAATGAATGGTGATACCACACACTCAAGTCGTTGACTTAGTT
TAATGCCGCCATTAAAACAAAAGACAATGCAGCCCTAAAAATAGCCCCAC
AGCCGCCGGGTGTCCGACGGGGCCACGTAGGGGTCATGCCCCAAAAGTGC
CATAAACAACCCGCGGGACCCTTTTTCCAATTGGGACCGAAGAATAATGG
ATGTCACTCAAAACGAAATGTGCGCTTGTTATCGTCCTGCAGGTCTGTTC
TATCTGGACGCCTGTCGACCCGGTTCCCATGGAGACGAGCCTGCAGTTCG
TGCGCGGGTCTCACGGGTGGGGCTGGTTCTACCCCCGGAAGTTCGCCACC
ACGCGCAACTACAGTCTGACGGGGGGCGACACAGGCAGCAGGACGTACCG
GGACGTACCCGACATAGATGGGGACAGGGACAAGTACGAGATTCTCACCT
GGGACGTCCAGGTATGTTTCACCTGGTCATGTCATGATCAATACATACAT
AAAACTAAGTCACTCCGTAATGTCATCGGCCCGATTTGCACACACGTTTC
GGAGTCGACTCGAGGCTGTGTGTGAGGAGCTTTGGGCTGCTCGAGTGGAG
TTTTCCTACTAGAAAACGCTACTTTGGTGACCTAGGGTTCTCCTTGCACA
GTCCTGAGTCGACTCAAAAACACGTATTCAAATCGGGTCATTCTCTTGTC
TTTATCTCTTGAAGTGTTTTGATCACGTGCTTGGTCATTGAAATCTTGAT
GAAGGCCGAAAATTCGCCAGGCTTCTTGGTTGTGCTGGAACGCAGTTTGG
TTGATTACTGTGTGTCGTTGTCTGTTTATTTGTTTGTTTATTTGTTCCCG
TAGCCCGGAGACTGTATCGTGTTCCACATGAAGACCCTGCACGGCGCGCC
CGCCAACCCGTCCATGGCCCTGCGCAGGCGCGTGCTATCCACCCGGTGGC
TCGGGGATGACGCCGTGCTCGCCAGGAGGCCCTGGGAGGTCTCTCCGCCA
ATCACAGGTGAGTGATCTCTCCACCAATCACAGATGAGTGGTCTCTCCGC
CAATCACAGGTGATTTATCGAGTTGCTTGCTGGTCATGTTGGGTTTGTCT
CTGGTATGTTTAGCCTGGTCTAAACTGCCTTTCTGTGCAGCAGAATAGTC
GCACTGGTCACACTTATTTGGTTTCTCGCCTGTATGGGCTCTAATGTATG
GAAAGGTCAGATATAGCTGCCGTCTTCACTGGATAGCGACTTAATGACCT
CTAAATCCAGAGGTTGTGAGTTCGAACCCCGGCTGTGTCGCTCACCCGAC
ATGCACGCTACTGGAAAGGATTGCAGTCATGAATTAGGACGAGACGTTAA
GCCGTTGTCCAATGTTTATTGTACTTGTCTTAGAGAGCTAGGGGTATTTC
CCCGGTGCACTGAACCTGTAAATACTGTACATAACGTCTGTCTTCTCTGT
CAGGACCAGTGGATCTTCAGTGAGATAAACTGTTTATAGATCACTTTCAC
TTCCTTTCTTCCACAGGAGGCCTTTCATACGGAGACAAGATGGCGTGCGA
CACATTCCCGCTGATCTGGAAGCGAGACTAGACTTGGTCGGGATTCGGTC
GGGATCCGGTCGAGATTCGGTTGAGATCCGGTCTGGATCCGGTCGGGATC
CGAGAGAATATTCTAACACTTTGTGAACTCCAAGCAGATTGGTGGGGGAG
ATCATAATGTCTTCTGGTTG Coding sequence (CDS) from alignment at Sc0000112:412740..415909- >BlTCONS00088476 ID=BlTCONS00088476|Name=BlTCONS00088476|organism=Branchiostoma lanceolatum|type=CDS|length=555bp|location=Sequence derived from alignment at Sc0000112:412740..415909- (Branchiostoma lanceolatum)
ATGGACTCACAGACGGCGGTATTCTACCACGAGCACGTTCTGACGAAAGA
CCCGGGCACCTACAAGACCACGCCCTGGCACCACGACCAGGCCTACTACC
CCGTGGACGGGGACAAGGTCTGTTCTATCTGGACGCCTGTCGACCCGGTT
CCCATGGAGACGAGCCTGCAGTTCGTGCGCGGGTCTCACGGGTGGGGCTG
GTTCTACCCCCGGAAGTTCGCCACCACGCGCAACTACAGTCTGACGGGGG
GCGACACAGGCAGCAGGACGTACCGGGACGTACCCGACATAGATGGGGAC
AGGGACAAGTACGAGATTCTCACCTGGGACGTCCAGCCCGGAGACTGTAT
CGTGTTCCACATGAAGACCCTGCACGGCGCGCCCGCCAACCCGTCCATGG
CCCTGCGCAGGCGCGTGCTATCCACCCGGTGGCTCGGGGATGACGCCGTG
CTCGCCAGGAGGCCCTGGGAGGTCTCTCCGCCAATCACAGGAGGCCTTTC
ATACGGAGACAAGATGGCGTGCGACACATTCCCGCTGATCTGGAAGCGAG
ACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00088476-exon-Sc0000112-1564993656:415326..415909 | BlTCONS00088476-exon-Sc0000112-1564993656:415326..415909 | Branchiostoma lanceolatum | exon |
| BlTCONS00088476-exon-Sc0000112-1564993656:414515..414619 | BlTCONS00088476-exon-Sc0000112-1564993656:414515..414619 | Branchiostoma lanceolatum | exon |
| BlTCONS00088476-exon-Sc0000112-1564993656:413999..414217 | BlTCONS00088476-exon-Sc0000112-1564993656:413999..414217 | Branchiostoma lanceolatum | exon |
| BlTCONS00088476-exon-Sc0000112-1564993656:413453..413606 | BlTCONS00088476-exon-Sc0000112-1564993656:413453..413606 | Branchiostoma lanceolatum | exon |
| BlTCONS00088476-exon-Sc0000112-1564993656:412740..412943 | BlTCONS00088476-exon-Sc0000112-1564993656:412740..412943 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000112 | genome | Sc0000112:412740..415909 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF043085 |
|
