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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1004742..1012536+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000144 ID=BlTCONS00000144|Name=BlTCONS00000144|organism=Branchiostoma lanceolatum|type=mRNA|length=7795bp|location=Sequence derived from alignment at Sc0000000:1004742..1012536+ (Branchiostoma lanceolatum)
GCAGGTCATCGCTAGGCGGCGCCGCAACCCGGACACTGCGGGGAAACAGG
AGGACAGGACGCTGCTCAGACACGAAGCTTGTGTACGTCACTTTTAAGTG
GTTTCAATATTTCTCAGAAAAAGTTTCTCAACACTAAATCTGATCTTTAA
GCACACATAAAGCATGTGTAAATCATACATAAAACATATTTTCATAAAGA
AAATGCAACCTTTTAGGTTTCCATTTTTTTCATTCCAGCATGTGGTATAC
TGTTTGCATAAGGGTTAGAGTGTTTGGCCCAGAAACAAGAGGTCCTGGGT
TCAAATCCCCTGACATGCCACCGATGTTGTGCCCTTTGGAAAGGCACTTA
ACAACACCTTCCTTACTCCACCCAGGTGTAAAAATGTGTACCTAACTTTG
GTTGGAGAGGTAAAAAGTGGGTGAAGGAGAGGGATGGGCTCCGCTCTCTT
ATACCATGCCAGCGACATAGCACTAGTAGGTAACAACCTACTGCCCCAAT
GGCCTCAAAAATTATCCTTATTACTTTGAAGTGTCAAAAATCATGGATTT
CTATTATCAACTAAATTGTGTGCAACAATCATCTTTTATCTGTAGGATTT
TGTAGATCTCAGGACCATAATTACACCTTGAGTTGTAGTCTATGTTTGCT
TGGGTGTCTGTGTTTGATTTGTGTGTTAATGTAGTTGTGTGTATGTGTTT
AATGTTGTACAGCAAGCTGAGAGTAGAGCGCTGCATGAGCAAGGCTTGAG
AGGAGTGCAGCAAGCTCTGATGTCAATCACCACGTCGTCAGGTCAACACA
GACTGGCCCCTCCCACAGAACAGGTAAGCTGTCAATCACCATGTCGCCAG
GGCAACACAGACTGACCACGTCAACAGTAAAGGCTATTTAACTTCTGGCA
TCCTTTCTCAAGTTCTTCCAATGTAATATGTTTTGATGATTTTTCTTGAA
TGGAAGGCTGGCCATTATAGCTATAGAGTGTTGCTTTTGAGATAAAGAGA
ATGTTGAGTTTCTGCAGCTTGTAGCCTACAATACACAGGTGGGCCCCCAC
ATTGTTATTAGTACAAATATTGCTGTGAATGATATACTAGTATCATATCT
CCCATGTCTCCAGCTTGCAGCCTTCAATGCACAGGTTGGTCCCCACATTG
TTTTAGTACAAATATTGCTGTTAATGATATATTATATCTCCCATGTCTTC
AGCTTGCAGCCTACAATGCCCAGGTGGGTCCCCACATCGAGGAGACGTCA
GACCTGGAGTGGACCGACACCAGCTCCAAACCCGAGTACTTAGTGGGACA
GGAGGTGAGCAGACCTGTACCATGTACTATCTGTAGTCGCGGACTTACTG
AGCCTTCCTCTGTATCTAGAGTTCACTGTTCATTGTGTCCTTGTCGAAAA
GAGCTAGGGGAATTATTTGGTCAAAGGAAACTGTATGATACTGTACTAAG
CATCTGTCTACTGTTGTTGAATCTTTACAGCCACTCGTCTCGTTGGCTTC
TGGCCACTTTGTGCTATGACCCTTCTTCTCTCTCTTCTGTCATGACCAGT
GGAAGCTTAGCTCTTCAGTGAGCTAGCTACGACTGGACTGAGATCACTTT
CCTCTTCCCAGTACCACCTTTTCCTCTAGCATCGCAGCCTGTCAATGCCA
ATGATATAACATTAGCCAAAGCTGTGTTCATGTTCTTGAACTACATATCT
ATATCCCCCCAGGTCCTGTACCTGCATCCCTCGGAGTGCTACAACATCCA
CTGGCCCATGTCCTGTGGTCAGCTCCACCTGCACAGCGGCCCCGGAGGGT
CTCTCACCGCAGTTCTGGCTGACCTGGAGACCATATGGACCACGGCCATC
GAGAAGTTCCTTGACATTCCTATCGAGGACCTCAAAGTAGGCTTCTGTCT
TGTAAACTATTTTTTTTCTCCCCTCCATTCATTGCCCGCGTAATGAATAT
CTGTAAAGTCCTAGGTTATGCTTGGGTCACATTTTCAATCCGGGGCCCGG
CCGGGCAGTGTTTGGGAACAAAATGTATGATATAAAAGACAACAAAAAAC
ACAAAACGTACCAAAAATTATTCAAGAGCATAGCTAGTGCATATTTATTG
ATATACATTTTAATTTTTCGTTTCCGCAAACAGCCCGGCCGGGCCCCGGT
TAGGAAATGTGACCCAAGCATAAGGGGGAAGCACTGTAGATGTGACATTC
TTATTAAGCTCAACAAATTTAGCTACAAACATTTCCAATGCCATCCAACA
TAATACATTTTTCATTATTGAAAAGAACTTACTATTAGTATTATCAACTA
TTATTTCAACAATGAAAAATGCTGGATGGGATTTGAAATGTCTACAACTC
TCTACATTTGTTTAATGGTTAGATTTGATCAAAATGTTATTATTCCGTCC
TGGATGTCTAACCTTCATAAACGCACTGCACATATGTTTTTGAGTTATGT
TTAACACTACAGATATACATGTATCCATCATGATGTTTGTTTATTTTTGT
TTATTTGTTTTTATTTATTTTTCAGCACTACAGATGCATCCTGCTTGTCC
CAGACATCTACAACAGACAGCACATCAAGGAGCTCATTAACCTGCTGCTG
AACAGGCTGGGCTTCTCTGCAGCCATCGCACATCAGGTGGGCTGTCAATC
AATCAACCAGTCAATCAATCAATCAATCAATTGGTCATATTTAAAGTCAT
TAACCTGCTGCTGAACAGGCTGGGCTTCTCTGCCGCCATCGCAGATCAGG
TGGGCTGTCAGTTAGTCCATCCCTCCATCCGACCGTCCATCCATCCATCC
ATCCATCCATCCATCCATCCATCCATCCATCCATCTGTTACTATTTTTGT
CAACTGGTCAACCAGATGTACATAATTTCTGAAATGTACATAATCTCCCA
TATCTTAGACTGCTGATGTTGAGTTGAAACCCTTTTCTTCATTAGTACTA
GTAGTGTGCATGTGGTAATGTGTCAGGCGGCTGTTGGACTGTGTCTGTGA
CCCCTTGCAGGAATCAGTTTTGGTATTAGGTTACTACAAATGTATCTGTT
TACAGGAGTCTGTGTGTGCGACGTTCGGCAGCGGTGTGGCGAGTGCCTGT
GTGTGTTAGAGGTTAAAGGTTATGTGTGTTTACAGGAGTCTGTGTGTGCG
ACGTTCGGAAGCGGGGTGGCCAGTGCCTGCGTTGTGGATGTCGGGGACCA
AAAGACGGCTGTTTGCTGCGTAGAAGACGGTCTCTCACACAGAAACTCAA
GGTCAGTATGTAACATTACAGATGGCTTTTACAGATGAGGCAATGTATAT
CATATTTGAATCGATTTATTTGATATCTCATATTTGTTAATGCCTGCAGT
GAATTGTCTCCATTAAGTGTGTGTAGCTGGGTGTCTGGATGGGTATGTTG
ATTGTTGCTTGTCAGGGTGTGTGACTGCATGTGTAGATGGGTGTGTAGAT
GGGTGCATATCTGGATGTGTGACTTAGCTTAGTGTGTGAAGGGGTGTGTG
GATGGGTTTTTACCTGGGCATGTGGCTGGTTGAATGGCTGGGTGTATTTA
TAGGTGTTTGTGGTTGGGCGTGTGGATGGGTTTGTGGATAGCTGTGTGGT
TGCATGTGTGGCTCTGTGTGTAGATGGGTGTGTAGATGGGTATGGATAGG
TGTATGACTGGATGTATAGATGGGTGTATATGTATTAGTGTGTGGATGGG
TGCATGGCTGGGTGTATAGATGGGTGTATATATTGGTACATGGATGGGTG
TATGGCTGGGTGTTAAGATGGGTGTACCTGGGTACATGTATTTAGATGTC
CTTCCCTCCCCCCAGACTATGGCTGGACTACGGCGGCAGGGACATCACCA
GGTGCCTGGAGTGGCTGCTGAGGAAAAACAACTTCCCATATAAGGACTGC
AACCTGCTGGACAGGCTGGACTGTCAGCTGCTGCAGGAGCTCAAGCACTC
CTCCTGTCATCTCAACAGGGTACTGCAGGTTTCGTATATAACACACATAT
AACACACTCTAGGGCTAACCTAAACCCATATAAGGACTGTCAGCTGCTAC
AGGAGCTCAAGCACTCCTCCTGTCATCTCAACAGGGTACTGCAGCTCTTA
TATAACTCTTATCCTAACCCTGAGGAAAGTCTAGCCTATTTGCGGAGAGA
GACTCGGGAGCTATAATAGGTCTGGATTCCAGGCTAAGGACTGTCAGCTT
CTGCAGGAGCTCAAGCACTCCTCCTGTCATCTCAACAGGGTACTGCAGCT
CTCCTCAAGCCACAATTAATTTTATGATGTTATTTCACTCTTGGTGTACA
ATTTTTTGTAGCATGATTATAGCAGGGCTGTGACAGAATCACATGCATTC
TAACAGTAGATCTCTCCTGCCGTTTCAGGACATGTTTGGTGCCCGATGTC
AGGACGTCCATGTGCAGAGGCCGGACACGTTCACCCGGCGGTACCAGGTC
CGGTTAGGGGAGGAAACCATCCAGGTACGGGTCACACCTCCTTGTGTTAT
CTTTGCCATCCTGGTCTTCTATCTACTAAACATTTGCTTTCAGTTGGTTC
ATCTTTATGAATGATCATCATCATCATGTCAGGCGGCTTGCCTGGACTAA
GGCTGCTCTCTCCCTCCATATGACACCACCCGCCATTAAGTGCTCTAGGT
CTTCAGACCTCACCCCTCCACCCCCGGCAAGTTGGACTATCAAGAGTGAT
AACTCACGAAATCTAAGGTTTTCATTGATTCTGTCATTTCAAGACTCAAC
TTGGGATTATGGAGACTGTCATGGAGATTTGGGAGAAGTTCATGATGATT
CTTTAACATTGCAATATACTTTCATCTAATTGTTCCATCCTATTTTGAAT
CCTAAGGCACCCATGACTCTGTTTTGCCACTGTAACCCATGTGTCTGTTT
TACCCCCTGTAGGCTACCTAGCTGTCTGTCTATTCTATACCCAAGATGTT
TTATATAATCCCTATAAGTATAATCCCTATAAGCCATGGGTCTGTTGTAC
CCCTGTAACCCATGGGTCTGTTGTACCCCTATAGGCACCCATGGGTCTGT
TCCACCCCCAGCTGTTTGGGCTGGTCGGCAGCAGTCTGGTGCACACCCAG
CTTAGGAACCAGGGAGACCCGGAGGACGTCCATGACGAACACTACCTGCT
GCAGACCCAGAGCACGCAGCAACAGGTAACCTCTAACCTCTCACACTTAA
CCTTTGACCTCTAACCCACCACTACCTCCTGCAGAGCATGCAGCAACAGG
TCACCGTACACTTTTCGCACATAGCCCCTAAACTTTGACCCACCACTTCC
ACCAGCAAACCCAGAGCATGCAGCAAAAGGTAACCTTTAACCTATCACAC
CTAACATCTGACCTCTAACCCACCACCACCTGCACAACAGCAGGTAATCT
AAAAAAATCGCAGCTGTTTTTCTCACCTATCTTGCGCCTGTGGAAATGTT
TGTAGTCTTTATACATGTACCCCTGTGCAAAAATAAATTGTACACATGTC
TGCAAGCTCTCAATGACATTTTCGGCAGAAATACATCCGGTGTTTTCTCG
ATCAGCGTATGATTTTGGGGGATTGTTTATAGATTTTAGAATCTGTGATA
ATATCCTGTATTTGCAGGTGGCCAAAGCCGTGGCAGAGAAGAAAGCCAAG
GCGAGCAGTAAGCAGGACCAGGGGGCAGACGGGGACAAGACCTCGCCCGA
CTCCAAACCCAGCCTGGAGCCCAGGCACAAGAGGGCGCGGGAGGACGCAG
GGGGGTCGGAGGCTAAGCATCGCAGGGGGGTGGTCCGGCTACCCTCTACC
TCCCGGAGGGGGGTGGAGCCTCCCCCCCTGAAACTGATGGGGGTGGACCA
GGCCATTCTGCACAGTATAGAGTGCTGTGGTGGGTATAAGTGTGATAACA
CAGTACAGTGCAGAGTGTGATAATACAGTATGTAATACCTGGGCTGTGAT
AACGTGCGATACATGTATTCCTGTCCAGATGACATTTTGGGTTATCACAT
GGGCTTCTGCTTGTATCGCATGGGCTTCCACCGAATGACTTGTATCGCAT
GGCCAAGCACGTGATTCAGTCAATTTCATGAAACTTGTGAAAATAGAACA
TCATAATCTTGGATTTGGTCAATTTTCAATCACAACTAATACTAGATGTT
TGTCTGCAGCGTCTGACGAGACGAAGAAGAAGATGTTCTCCTGCATCCTG
GTGGTGGGAGGGGGGCTGAACTTCCCGGGCGCGCAGAACTTCCTGCTGCA
CAGAGTCAGGTCACANGCGCGCAGAACTTCCTGCTGCACAGGGTCAGGTC
ACAGCTGCCCGCCAAGTACCGCAGCATCGCCGACACCATGGAGGTCATCA
ACAGGCCAAAGGTCAGTAGGCTGGTCAGATGTCAGAACTACTCGCACAGT
AAAGATAATCAACAGACGAAAGGTCATTAGGTCATCCCCGGGCCAAAGGT
CTGTAGGTCATTGTCTGGTCAGAGGTTAATAGGCAATACAGGTCTAGAGA
TTATTAGGTCATCACCAGGCCAAAGGACCTTATGTCATCACCTGGTCAAA
GGTCATCAGGTCATCAGGTCAAAGTTCAGAAACACATGCCATGAAGGTTA
TCACCTTTTCTATAGGTCAGATGGAAGCTTTACCATGGTTGAATCAGGAC
TGGGTGGTGTATGTTTGTACCCAGCCCTCAGCTGATTTTTATTACTTGTT
TTGACCTTTACAGGACCCGCAGATGGTTTGCTGGAAGGATGCTGGTTTTT
GTGTTTGTTTGTTTTTTAATAATGTGTGTTTGTTTGCTCCCATGTAGGAC
CAGGACCCGCAGATGGTGTGCTGGAAGGGAGCGGCCGTCCTGGCGTGTCT
GGACACGACACAGGAGCTGTGGGTGGGGCAGCGCGAGTGGAGGAAGTTCG
GCATCAGGATACTGAGGGAGAGGTCGCCGTTTGTCTGGTAGTCGGCGAGA
AGCGGTCGCCATTTGTCTGGCCGTCAATGGGAAGCGGTCGCCGTTTGTCT
GGTACTCAGTGGGAAGCGGTTACCATTTGTCTGGTAGTCAGCGAGAAGCA
GTCGCTGTTCGTCTGGTAGTCAGCGGGAATCGGTCGCCGTTTGTCTGGTA
GTCAGCGGGAAGCGGTCGCCATTTTTCTGATTTTCAGGAAGAGGTCGCAC
TCTTGTGTATTAGTCAACTGTACTGTGTAAATAAACGTGATGATGATGAT
GATACAATTTTTTTTATTATTCATAACATTCAAACTTTACATTGGTATAG
TCTTGCAACTACAAATGTATATATACATAGTTGAATTGCACTGCTGACAA
TACATTGGACTTTTGGACACTATAAACAGCTAAGACAATTGCATTTCCTC
TAGAATCATAAGCTGTATCTGGGAATTCATTAAAACCTACTCTACTTATT
GCTCTTGTCTGAAATTGGAAATAACTTAGATTTAACCTTCTCCCTGCTGC
CTAACTCTGTAACCAATAGAGAATGGGGTGGCAAATGGCTACTTCAGTGT
GCTAGAGGTTAAGCTTTATTTTTGGCACCTTTATCAGTGCTTGTATTGTT
TTCATCATAATGTCGGCTGGGCTGTTTGTGTGGGAAAAAAAGAAGACCAT
AATATTTTTATACAGTACATATAAGTGCAGATGATACATACAGTCTGTTC
AGCTTGCATGTACCTTGGGAAAATTCCCTATAAGGTGTTCTCTGCAAGAA
CAAGAAATAAAAAACCATCACACATTGTATTTAGGTCCCTACAAGGACCC
CTGCTCTTTTCAATAGGTCGGTCCATTGAAGAGACATGGCTGCTG Coding sequence (CDS) from alignment at Sc0000000:1004742..1012536+ >BlTCONS00000144 ID=BlTCONS00000144|Name=BlTCONS00000144|organism=Branchiostoma lanceolatum|type=CDS|length=1668bp|location=Sequence derived from alignment at Sc0000000:1004742..1012536+ (Branchiostoma lanceolatum)
CAGGTCATCGCTAGGCGGCGCCGCAACCCGGACACTGCGGGGAAACAGGA
GGACAGGACGCTGCTCAGACACGAAGCTTGTCAAGCTGAGAGTAGAGCGC
TGCATGAGCAAGGCTTGAGAGGAGTGCAGCAAGCTCTGATGTCAATCACC
ACGTCGTCAGGTCAACACAGACTGGCCCCTCCCACAGAACAGCTTGCAGC
CTACAATGCCCAGGTGGGTCCCCACATCGAGGAGACGTCAGACCTGGAGT
GGACCGACACCAGCTCCAAACCCGAGTACTTAGTGGGACAGGAGGTCCTG
TACCTGCATCCCTCGGAGTGCTACAACATCCACTGGCCCATGTCCTGTGG
TCAGCTCCACCTGCACAGCGGCCCCGGAGGGTCTCTCACCGCAGTTCTGG
CTGACCTGGAGACCATATGGACCACGGCCATCGAGAAGTTCCTTGACATT
CCTATCGAGGACCTCAAACACTACAGATGCATCCTGCTTGTCCCAGACAT
CTACAACAGACAGCACATCAAGGAGCTCATTAACCTGCTGCTGAACAGGC
TGGGCTTCTCTGCAGCCATCGCACATCAGGAGTCTGTGTGTGCGACGTTC
GGAAGCGGGGTGGCCAGTGCCTGCGTTGTGGATGTCGGGGACCAAAAGAC
GGCTGTTTGCTGCGTAGAAGACGGTCTCTCACACAGAAACTCAAGACTAT
GGCTGGACTACGGCGGCAGGGACATCACCAGGTGCCTGGAGTGGCTGCTG
AGGAAAAACAACTTCCCATATAAGGACTGCAACCTGCTGGACAGGCTGGA
CTGTCAGCTGCTGCAGGAGCTCAAGCACTCCTCCTGTCATCTCAACAGGG
ACATGTTTGGTGCCCGATGTCAGGACGTCCATGTGCAGAGGCCGGACACG
TTCACCCGGCGGTACCAGGTCCGGTTAGGGGAGGAAACCATCCAGGCACC
CATGGGTCTGTTCCACCCCCAGCTGTTTGGGCTGGTCGGCAGCAGTCTGG
TGCACACCCAGCTTAGGAACCAGGGAGACCCGGAGGACGTCCATGACGAA
CACTACCTGCTGCAGACCCAGAGCACGCAGCAACAGGTGGCCAAAGCCGT
GGCAGAGAAGAAAGCCAAGGCGAGCAGTAAGCAGGACCAGGGGGCAGACG
GGGACAAGACCTCGCCCGACTCCAAACCCAGCCTGGAGCCCAGGCACAAG
AGGGCGCGGGAGGACGCAGGGGGGTCGGAGGCTAAGCATCGCAGGGGGGT
GGTCCGGCTACCCTCTACCTCCCGGAGGGGGGTGGAGCCTCCCCCCCTGA
AACTGATGGGGGTGGACCAGGCCATTCTGCACAGTATAGAGTGCTGTGCG
TCTGACGAGACGAAGAAGAAGATGTTCTCCTGCATCCTGGTGGTGGGAGG
GGGGCTGAACTTCCCGGGCGCGCAGAACTTCCTGCTGCACAGAGTCAGGT
CACANGCGCGCAGAACTTCCTGCTGCACAGGGTCAGGTCACAGCTGCCCG
CCAAGTACCGCAGCATCGCCGACACCATGGAGGTCATCAACAGGCCAAAG
GACCAGGACCCGCAGATGGTGTGCTGGAAGGGAGCGGCCGTCCTGGCGTG
TCTGGACACGACACAGGAGCTGTGGGTGGGGCAGCGCGAGTGGAGGAAGT
TCGGCATCAGGATACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000144-exon-Sc0000000-1564993656:1004742..1004823 | BlTCONS00000144-exon-Sc0000000-1564993656:1004742..1004823 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1005454..1005564 | BlTCONS00000144-exon-Sc0000000-1564993656:1005454..1005564 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1005944..1006045 | BlTCONS00000144-exon-Sc0000000-1564993656:1005944..1006045 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1006454..1006627 | BlTCONS00000144-exon-Sc0000000-1564993656:1006454..1006627 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1007267..1007377 | BlTCONS00000144-exon-Sc0000000-1564993656:1007267..1007377 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1007877..1007992 | BlTCONS00000144-exon-Sc0000000-1564993656:1007877..1007992 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1008557..1008710 | BlTCONS00000144-exon-Sc0000000-1564993656:1008557..1008710 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1009120..1009215 | BlTCONS00000144-exon-Sc0000000-1564993656:1009120..1009215 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1009776..1009916 | BlTCONS00000144-exon-Sc0000000-1564993656:1009776..1009916 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1010359..1010620 | BlTCONS00000144-exon-Sc0000000-1564993656:1010359..1010620 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1010901..1011102 | BlTCONS00000144-exon-Sc0000000-1564993656:1010901..1011102 | Branchiostoma lanceolatum | exon |
| BlTCONS00000144-exon-Sc0000000-1564993656:1011539..1012536 | BlTCONS00000144-exon-Sc0000000-1564993656:1011539..1012536 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1004742..1012536 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000076 |
|
