Blg01423.3 (mRNA) - B. lanceolatum

Overview
NameBlg01423.3
Unique NameBlg01423.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000046:1346837..1356174-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01423.3 ID=Blg01423.3|Name=Blg01423.3|organism=Branchiostoma lanceolatum|type=mRNA|length=9338bp|location=Sequence derived from alignment at Sc0000046:1346837..1356174- (Branchiostoma lanceolatum)
TTGGTCGGATTCTGGGCGGATTGATGGATCGTCTTGGGCACATCGCTTAT GTTTGTCACGGAAAAATTCGCGGCGCGATCGGGACCGACCAAAAGCAGTC ATCTTGAGCCGATGGTCGTCTTGTGGAAGTGGGCGTTAGACCAAGTTTGA CTGTATGTAAGTAAGTGTACTGAAAACACGTGCCACTTATTGCTCGTGGT CTAATTTATCATTAATCGGCCGTTTCTCTACAGCGGCCATCTGTCCATAG CGGTCGGTTTTGGTCAGTCCCTTGAGTGACCGCTATAGGCAGGTTTGACT GTACTAAAATCTATCTGTACATCGACTTCACACCATTTTTATAAAATGCG TTTTCCGCTATGTAATAGCATACTATGTTGTCGCCATACAAGAAACTAGA ATTTTATGCTTATGTTTGCACTTAATAAGCTAGTTCGGAGTTGCTACTAC GCATGTGCAGTGTCAAAGGTGAAGGCCCCCGCGACGGAAACAGTGCTCGC CTCCACATTGTCTCGATTTGCATAACAACGCACAGACGGGTCTTGTTTCC GTCGCGGGGGCCTTCACCTTTGACACTGCACATGCGTAGTAGCAACTCCG AACTAGCTTATTATGTGTCATCATTACCTTTGCCAAGAAGGTTATATGTT ATGCAGTCACAGTATGTCTCTGCGTGTGTATGTGTATGACCAAGATTGAT TGGTAGTGGTAGTGGGCAACCTCAAGGCAACCGTACACACTTACGCCACA TCTTCAGAAAAGACACTGGAGCCGCATATCCCTGTCTAGGATTTTATTCG AGCCCACATCTGTATGACCAAGATTGATTGGTTTCATATTTTGTGTGTTA GTAGGGTGTGACTTGGTGTGAGGAAAGCTAGAAGCAATTAGAATTGTGGG CCCCTAGCAGCATGTCCCATGGTACAGCAGCAGAACTCCCAGTTTTGATA TCTCATGATTACTGTTAATAGTACAGTAGAATCCGCTTAACTGCACACCC CATTTGCCAGCGTATTTGGTGCAATTATCCGGCTGGTGCAATTATGCGAA ATTGCCCAGCTGGACCAGTACTACACTGTATCATACAGGAGGTGAATAGT TTAAAACCTCGATGTGCTGTATGAACTTGTTAGTTAGCATTTAGATGTTA GAAAGCTTTCGTTATACAGGTACAGTGCGGTAACACCGTAGATCCCACCT CTTGTTAGGGCCACATTTATGTATCAAAACAGTAAATTTCAAATTCTCAG GAAAGACATCTCCAATACAGTGAGTGAAATCTGTAAGCGCCAGCAGCAGT ATGTGAATATATCACTGCCACGAACCTGAAACCGCCAACAACACCCCATG TCATCCTTAATACTTTCACAGTAATAATACAGTGTACAGGTAGAGACCAA TATTTATTGAGTACAAAACGCAATACCGCAAAACGCAATACCGCCTTTGG CAGGCGTGCGTCTCTTTATTGTGACGACACGCCCCGTGACCTGCCCAGGA CCTCCCATACGATCGCTATCAATGTGATTGTCAATGGAGACCACCTTCTT TTTTTAGTGAAAACAATTTTAGACATATTGACGTTATTGTGCCTCTACAT AGGCACTTATCGGCTCATTTGTACCGCGTTTGCCGATTTTTAGCGCACTT TTTAGTTAACTTGTCGAGGATTTTTGAAACATTTTTGTGCAGTTATCCGG CATTGTTGACAATGCGCCGTGCTGATACATGTATGCAGAGTCACTAACAA TGCAGTGAATAGGAACCAGTTTGGGATTTTAGGATTCGGTGCAGTTAAAT GGAATGTGCGTTTATCCGAGGTGCAATTAAGTGGCTTCTACTGTAGAAAG CTATTAGGACAGAGAGTAAATGGCATAGGTTTGGGGCCCCCAGCGGCTAG TTATGGAACTGCAGGGGCTCTATATGTTATCATGTTTCTTTTTTGGCATG TACATGTAAATGGTTTTGGTTTCATTTTGTTGGATCTGATTTTTAAATGA TATCATTCGTAGTTCTGGGATAATGACTGATTTTTAAATGATGTTTCATT TCTGTTTCAATAAAGATGACTTACTGATGCGGAAGGGTGGTAAAGATGAT GGCGCCGAGATTGAGGTTGTACTCAAACACCGGACCCGGAAAATCTTTGA GGAGTTTCACGGTGGTGCATTTGGAGGACACACAGGAATCAACAAAACCG TCAAGGCCATCAGCTCACGGTACTACTGGCACAAACAGTCAGAAGAAATT GAAAAATGGGTAAGCATCCTGTTACAATGTAGACTGGCTGTAAAAAGTGG TTAGTTTGACAGTTAAATTTAAATATGCGTGGTGTACATATTGAAATAAA ATAAAAGTTCAATTGATATATTCATTCATGATCAATTGATAGAGTCTCAA GAAGATATATGTCTTTACATTCGTACCAAATTTCAATTTGAAGCAACTTG CAAAATATACTGACTGTCCCTAGTACATTTAAGCAAAAACACAACTGAGT AACCAATATAGAATTTTTCAGGAATTCGTCTGATTACAGTTGACATAACA TTTTTTGTTTTTATGTGTGACAACAGGTTTAAATAGCAAGTTTTTGTGGT CTTATTCTATTATTCCTAGGATAATGACACCTTCTTTTTCTTCACTTCCC CACAGGAATACATGCATTCCTGGCATATATTGTACCTGTAGTGTCTCCAT ATATGATTTTTATGTGCAAAAAAACAATCACATTTCCTCAATTTCAGGTC TTGGAATGCGAGAGATGCCAGAGTATGGAAAAAATACCAAAGGGGACGAA GAGACTACATCCTATCAAGGTACTAAATAATCTTTTAGATGGAATTTCAT AGAAGTATTTTTTAAAATTTATCTGTTTTAAGGGGGAGAATTTAAACTGT TCTTCAACTCAAGGAACTCTCCAGAAATGATTGATTTTTGCTGTCTCAAG AACATTTGGCAAAGGTTAGAGGGGAGGGACTGGTTAATGGACATGCGCAC AAAGCCCAGTTTGCATGACCTTTTTTTTCTTATTATTATTTTTGAGAATT TTTTCCTGGTGAAATCTTTGGTCAATTTTGGCCAGTTTTCAGGCAGGGAG ACCAGACATGTGTTTACTTTTCAAATCCAAAAAGAAATTGTGACCTTTGC CATTTGTTGTGGTATAGAATTACATCATTTGGGGGGGGGGAGATTTCCCC CTACTAGACCAGCGATTCCAAGCTGCAGGGGGTAAGATCAGTGTTTGTTT ACATTCAAACACATTTAGGGCGTTAGAATGCAGGAGTCGAAGCTCGGCTT TGTCCAAAAACGGCAAGTAGACATGTTTAGCTGTCCAGTGGATGGAAGTT TTTGGACATTGAAATACTGTTAATGTACATTGAAGCCTGTTTTTGTTCCT TGTTTTGTACATAATCTGATGGACGTCTGTTCACCTACTCCCTCCCCAAG AGACTGTGTGGAATTTTAATGACTTGCTGTATTTGTAGCTTTAAATCAAA TACATATATTGTCTGTCACAATGGCTTCTACATGGACTTAACAACTCATG TTTTGTTTTGACCCAGGTGACAGGACCCTGGGATCTGGTGGGGGTTGACT TGACCGGCCTCCCAGAGACCCCAAGGGGCTTTAAGTACCTGTTCACACTA ACTGATTATTATACTAAGTGGGTTGAGGCCATCCCAATTAAGTCAAAGTC GGCCAAAGAGGTTGCAGCGTGCATCTTAAAAGTGTTCTTCCGACACTCTG CAGCCGGGGCAATACTTACCGACCAGGGCAGGGAATTCAACAATAAGGTA ATAACTAAACAAAACATTTCAAAACAAATTTTGTGTTCTGCTGTAGTGGT CTGGACACTCTGTAGCTACAATCAATCATTCTTTTTTCAACCTTTCAAAT AGTAATATATGTTGCACCCAATTTGGCAGCCAAGTGATGGTAAATAGTTC ATAGGTTCATCAGGGTGGTCATTAAGTTGTGTGTGTGTGTGGGGGGGGGG GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTCTGTATCT TTTATAGCAGTATAGCTGCCATTTGGTGTAACACCAGCTTTAAGGATTTA TCAAACAAGAAATCAAACCTGATATATTTAAGTTTCTGTGACATTGTGGC ATTTTATGATACATGTAGGTACATCACATTTCATCTTGGAACTGTTGCAA GTAATGCTCATCTAGTCTGTGTTCTGTCCTGTCTAGCTTACCTTCCATGC TGGACCTGATTAGTCCTTGAAGCAATCAGACACTTAATGAATTAAACTGC CAAGAGATTGGCCTATTCCTAATGCTGCCTGCATATGAAGCGGTACCTTT CAAATCTTGATATTTGACCCTTAGGCCACACCAATATGTTTTCTTGGTTA CAGGAAATAAAAGAATTATAAAATTATAAAAAATAATGCTAGATTGGAAA AACAACATGAAAACAAAATCTCAGAGGAATGCTTTTACTTTGGTGAACAC AGTATCAGGGTAGCCTCCGTTGCAGGCTATCAGTGGCTGATATTTACGGG CTGGCTGCAAAAAGTGTATTATTTAGCCCCCTAAAAAGCTGCTTCAGAGC CTGCAACGGAGGCTAGTATCAGGGAGTGAACAGGGTCAGGTGCAAGTTTT CACCCCAGCCTTCTGTTTTCATGATTTTTACCTTCGCCAAGAAGATTATG CATAGGGGTAGCATTTGTTAGAGAAGACCAGAATAACTTTAGAATGCATG GATGGATTGTCTTGATATTTGGTATGTTGTAGGTCTTGGTGTGACCTGAA AATGATCTAGATTTTGGCCCCCTCTAGCGGCTTGTTACGATACTGAAGAC CTGAAGAAAATACTATAATTCAAGATGGGCTTGATGGATTGTCATCATTT TTGGTATGTAGATAGCTTACGTGAAGCTTTGTATGTATGATTAGACGGAA ATTATGCAAATCATATTCTAATTTTCATAATCAATGAGGCAATTTTAAGA ACTTACTGTAATCCATGATATGACTATTCAAATATGTGACATTTGTAACT AAGGAAGAGAGGAATGTTGATTGTTATAAATTATGCAAATGGTGGCCTAA TTTGCATAATTAATGAGACCCAACTATTATAATATATTGGTAAATGACGG CAATTTCATACTAGTATTTGTGGCATTTGGAAGTTATATGAATGTCAACA TCGTTGACTCAAATTATGCTAATATGGACCTCATTTGCATAATTGATGAT AAATGTTAAGCTCATAATTTGAACAAGTTCTGTTATTTTGAGTGGAGGAG ACTGGTATGATTTATAACTGATAAGACTCCTAATACGTCAGTCATAAAGG TTAAAATCATTTGGCGTAGGTATGAGGTCGTGGAACTCTACTTTTGGTTG CTAAAATCAAAAATGAAAATCCGTTAACCAAGAAACTAAATTGGTATGGC CTTACAGTGCCTGAACTTTGATTAGTCAGTTATACGAAATGTCTCTCATA TCATTCACACTGCAATCAGCATGTCGCATTCTTGATATTTCATCAGTTGA ACAAAGAGATCTGCGATGCCCTGGGTATAGACAGGAAGATGACCTCAGCG TACCATCCACAGACTAACGGCCTTGATGAAAAAACAAACGCTAACATCAA AAGGTATGTTTACCAGTTACAGCAAGACACGTTAATTTTGAACATTCATC AAAATTTTATACATGAAGGAATTCCTCCATTTTCTTGCTCTTTTCAGCTA AATCCATGTATTTGCAAAGTTCATTTTTTCTGATTTGAAAATTTAAAAAT TGAAATACAAAATATTTAGGATAATGTATATGTAGCACCCCTATATCTGT CATACTTTAGCCTCCTTCGCAGACTTCCTAGAACGGCGGCATATACAGTA TATTTGGGGGGGGGGGGCACACACAAGGGAGTTATGTAGCTGAGGGAGTT GTGTAGGACGGCGGTCACCCCTCGACTACACAACTCCCTCGGCTACATAA CTCCCTTGTGTGTGCCACCTCCCCCCCCAATATACTGTATATGCCGCCGT TCTAGGAAGTCTGCGAAGGAGGCTAGTCATACTTCATGTATTTGGTTCCC TTAACTACAACTACAGAATATTTGAATATTTGAAAACAAAAAAATGCACC ACCTATTCAGTGAACAAACAAGTGCAATATTGTACCATTGAATTTGGAAT TACCATTGTAAGGCCATACTGGCATGATCATAATGATGACATCCTCTGAA AACCTAATAACCAATGGATAAAAAGAATGTTGGGCAATGCAAAAATTGAA ATTTAAGTCATCAGCACAGAATAATTTATAATAAATGAAAAAAATCCTTC ATTTTCTTCATGATTGTCAGCTTTTGTTTTGGAATATATAATGCTTTTTG TTCCCTTCACTCATTTTGTAGTTTCTTTGGCAATTTTTCCAATGTATCAA AAGTTGTTGTTTGCTATTTGATGCGTGATGTCATCCCTATAATCAACATC ACCTAATCCTTAAACACATCCTTTTGACAAACATTTAAGCTTTACACACA ACATAAAAAAGATTGCTCTGGGGAGCTTTCGAGACAAACTCTCTGTCTCT TCGTCAACCCGGTAATAAGGTCAGATCTCGTCTTGGAGTTCTCTTGTCAC ATGACTTGATGTTGATTATCATGTGACACATCATTCTTCTGTCTGGTCAA ATACAGTGGCCTCATCAAGACCCTGTCGGAAGACCATATCAACGACTGGG ACCTAAAGCTGGACGGAGTCTTGTACGCCCTGAGGACAAAGCAACAGACA ACAACAAAACACAGCCCGTTCTACCTTCTCTATGGGAGGGAAGCCAGATA TCCCTCACAGATCCCAGACTTGCCAGAGGAAATAGAGGTAATAATTGCCA TGGCATTATTTTTTCATTACCCAACATACTTACTGAAACCGACTCATCTT GGAAAGTCGTCAACCTTCATCATGGAAAGTCTGAGAAACAACAAATCTCT GTGCCAAAAGTTAACACCAAAGATTTCAAATACCTTTAGTTAAAGTCTCA GAATGTCAATATGATGTGTCAGGAAAATACAATAATTTGTGGGTTCCTTG ATTTTAATAGACAGATTTGTTTTCCTCCTTGTCAGGAATGGTGGGAGAGT AATGAGATGTTTTTTTGTTCCTTACCATAAAGCGAACAACTAGATATGTA AGGATTTTTGTCTTACAAGTTGCATTGGAGCAGTGCAATACGGCTTTAGT ATTTACAGATCTCTGTCACAATGTAGTTTCGTATATTGCCCTTTTTATCA CCATGAAAGAAGACTTTTTCATAGGGATATTGTTATGCATGTGTTTGCGT GTGTGTTTGGGTGTGTGTATGTTTCTGTCACCGGACACTTAAACTCAGCA TAACTGAAGAACGTGCAGATGGATTGTAATGATATTTGGTAACTTTGAAC TTTATTCACCTTTGAAGCAGTGGCACATCGGCAGCCTGTATACTAAAGGG GGTGTGACTCTTGATTTTGTTCCTTTGGGTAGGCATATGTAGTAATTGAT TGTCTGGTAGCGAATCTTAAAACTCTGATAATCTATTTTAGATTTGTTTT GCATTTCAAAACTGCTTGGGGTTTCTGGGACATTGGGGCGGCATTCACTC CATACAAGCAGGACGAGTAAGCACCCTGAATTGCACTTGGCTCTTAGATT TTCTCCTCTCCTCAGACCTACTAAAATTTATGAAGCAAGGGAAATTAGTA TGCCATTTGTTTCAGATAATGCTTAGAAGTCAAACCCTTTGTTGTCAAGC AAATTCATCATCCTGTAATTTTTTACCCAGTGTATGTGTGGATGTTCCAG AACCAAAAGCAATACTGAAAGTTCTTATTATCAAATACAGTAAAGGGAGA GGCAGTTCTCAGTCTCCTATTCAGACTGTGCAACATCTTTCCTTCTACTG CATCAAGCAAGTAACAATACTGTTATAACTTCCTTTTTTAGGAAACAATG CTGTCCTTGGATGCTCCTACAGACCTGTCCATTGCATCCATGGACAAGAA AAGGCAAGAAACAAAAGAGAAAGTCCTTCATAACATCAAGGTAAAGCAAC AAAAGTACAAGGAAAAGGCAGAGAGACCCCTGAAACAAAGGTCTTCAACA TTCAAAATAGGGGACAAAGTCTGGCTCCAAAACAGAAGAGGGATGGCCAG GAAAGGCGGCTCCCTCGAACGGAAATGGCTGGGACCATTTGTAGTGAGGA AAATACATCAGAACAGAAAGACTGTTAGAGTCGAAAACATGGCAACGAAA ACAAATCAGACTGTAAACATTGATTTCATCAAGCATGTTGTGGAGGAAAC AGATGTGGTGCAAGAGGATGGTGGGGAGACCGGAGACACCACTGGGGAGA CCGGAGACACCACTGGGGAGACCGGAGACACCACTGGGGAGACCGGAGAC ACCAGCCGGGAGACTGGAGACACCGACCGGGAGACCGGAGACACCAGCCA GGAGACCGGAGACACCAGCCGGGAGACCGGAGACACCAGCCGGGAGACCG GAGACACCAGCCGGGAGACCGAAGACACCAGCGGGGAGACCGGAGACACC AGCCGGGAGACCGGAGACACCAGCCGGGAGACCGGAGACACCANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNGGGAGACCGGAGACACCACCCGGGAGACCGGAGACACCACCCGGGAG ACTGGAGACACCGGCCGGGAGACCGGCGACACCAGCCGGGAGACCGAAGA CACCAGCGGGGAGACCGGAGACACCAGCCAGGAGACCGGAGACACCACCC GGGAGGCAGGAGACACCAGCCGGGAGACCGGAGACACCAGCCGGGAGACC GGAGACACCAGCCGGGAGACCGGAGACACCAGCCGGGAGACCGGAGACAC CAGCCGGGAGACCGGAGACACCAGCCGGGAGACCGGAGACACCAGCCGGG AGACCGGAGACACCAGCCGGGAGACCGGAGACACCAGCCGGGAGACCGGA GACACCAGCCGGGAGACCGGAGACACCAGCCGGGAGACCGGAGACACCAG CCGGGAGACCGGAGACACCAGCCGGGAGACCGGAGACACCAGCCGGGAGA CCGGAGACACCAGCCGGGAGACCGGAGACACCAGCCGG

Coding sequence (CDS) from alignment at Sc0000046:1346837..1356174-

>Blg01423.3 ID=Blg01423.3|Name=Blg01423.3|organism=Branchiostoma lanceolatum|type=CDS|length=1031bp|location=Sequence derived from alignment at Sc0000046:1346837..1356174- (Branchiostoma lanceolatum)
ATGCGGAAGGGTGGTAAAGATGATGGCGCCGAGATTGAGGTTGTACTCAA
ACACCGGACCCGGAAAATCTTTGAGGAGTTTCACGGTGGTGCATTTGGAG
GACACACAGGAATCAACAAAACCGTCAAGGCCATCAGCTCACGGTACTAC
TGGCACAAACAGTCAGAAGAAATTGAAAAATGGGTCTTGGAATGCGAGAG
ATGCCAGAGTATGGAAAAAATACCAAAGGGGACGAAGAGACTACATCCTA
TCAAGTTGAACAAAGAGATCTGCGATGCCCTGGGTATAGACAGGAAGATG
ACCTCAGCGTACCATCCACAGACTAACGGCCTTGATGAAAAAACAAACGC
TAACATCAAAAGTGGCCTCATCAAGACCCTGTCGGAAGACCATATCAACG
ACTGGGACCTAAAGCTGGACGGAGTCTTGTACGCCCTGAGGACAAAGCAA
CAGACAACAACAAAACACAGCCCGTTCTACCTTCTCTATGGGAGGGAAGC
CAGATATCCCTCACAGATCCCAGACTTGCCAGAGGAAATAGAGGAAACAA
TGCTGTCCTTGGATGCTCCTACAGACCTGTCCATTGCATCCATGGACAAG
AAAAGGCAAGAAACAAAAGAGAAAGTCCTTCATAACATCAAGGTAAAGCA
ACAAAAGTACAAGGAAAAGGCAGAGAGACCCCTGAAACAAAGGTCTTCAA
CATTCAAAATAGGGGACAAAGTCTGGCTCCAAAACAGAAGAGGGATGGCC
AGGAAAGGCGGCTCCCTCGAACGGAAATGGCTGGGACCATTTGTAGTGAG
GAAAATACATCAGAACAGAAAGACTGTTAGAGTCGAAAACATGGCAACGA
AAACAAATCAGACTGTAAACATTGATTTCATCAAGCATGTTGTGGAGGAA
ACAGATGTGGTGCAAGAGGATGGTGGGGAGACCGGAGACACCACTGGGGA
GACCGGAGACACCACTGGGGAGACCGGAGACACCACTGGGGAGACCGGAG
ACACCACCGGGAGACCGGAGACACCAGCCGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01423.3Blg01423.3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01423.3-exon-Sc0000046-1570713199:1356019..1356174Blg01423.3-exon-Sc0000046-1570713199:1356019..1356174Branchiostoma lanceolatumexon
Blg01423.3-exon-Sc0000046-1570713199:1353916..1354109Blg01423.3-exon-Sc0000046-1570713199:1353916..1354109Branchiostoma lanceolatumexon
Blg01423.3-exon-Sc0000046-1570713199:1353356..1353427Blg01423.3-exon-Sc0000046-1570713199:1353356..1353427Branchiostoma lanceolatumexon
Blg01423.3-exon-Sc0000046-1570713199:1350372..1350478Blg01423.3-exon-Sc0000046-1570713199:1350372..1350478Branchiostoma lanceolatumexon
Blg01423.3-exon-Sc0000046-1570713199:1349138..1349318Blg01423.3-exon-Sc0000046-1570713199:1349138..1349318Branchiostoma lanceolatumexon
Blg01423.3-exon-Sc0000046-1570713199:1347571..1348033Blg01423.3-exon-Sc0000046-1570713199:1347571..1348033Branchiostoma lanceolatumexon
Blg01423.3-exon-Sc0000046-1570713199:1346837..1346861Blg01423.3-exon-Sc0000046-1570713199:1346837..1346861Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000046genomeSc0000046:1346837..1356174 -
Properties
Property NameValue
GeneIDBlg01423