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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96303_cuf1 >transcript:BL96303_cuf1-protein ID=transcript:BL96303_cuf1-protein|Name=transcript:BL96303_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=201bp
ACSSSNGGCQELCLAHPEGMTCACRDTWELQEDGVTCCIASYTAYGGACF
KAYNQDKTYNQARQVCAADGGLLAMPKDRHVDTFLRDLKNAVNEMSPFWF
GLSDQNDEGEWMWEDGTPHDIITDWNRWQLGEPNDNQGEDCVNYYGSDWN
DAQCSTAYKFICQLKEAISCSLGYYRCGHGLACILSWKRCDGVMDCTDGS
D Run BLAST on NCBI mRNA from alignment at xfSc0000000:25409..27475- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96303_cuf1 ID=transcript:BL96303_cuf1|Name=transcript:BL96303_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2067bp|location=Sequence derived from alignment at xfSc0000000:25409..27475- (Branchiostoma lanceolatum)
GCGTGTTCCTCGTCCAATGGAGGGTGTCAGGAACTGTGCCTTGCGCATCC
TGAAGGAATGACATGCGCCTGTCGGGATACCTGGGAACTGCAGGAAGACG
GAGTGACTTGTGAGTAGCATATCGTGGTTCGTATCTGAAGTAGCCTCGGC
TATAGGCGGTGGCCAAGCAGGAGATTAACATAGGCTATAATACTTTCTAC
ACCCGATTATGCTGATGAGTGATGTGCATCTTGTGCATAATTTGTGGAGT
GTACAACTGCCCATTGATATGACTGTACTTCTATCCTTGGCGCCTTCTGG
ATGATGATGATGATGATGATACATATGACAATGTCAATCTAAACAAGATT
GGCAATGAAAAAGACATTGCCATGGCGAATGTCATTGTTGTTGTTTTCAT
ATTTACTACACCTTGATGAGGGCACTGATAGGTGGTGTTGTTCGTAAGGG
ATTTACAATGACAAAGGCATAGTTATAGTTGGAAAGACACGCACATAGCC
AAAAAACACACAGACAATGGCAGCACAGCTACGTTTTTTCACTACACACC
CCACCATATATCGATCTGAACATAGCCTCCGTTGCAGTCCTTCCCACAGC
GATTTTTTTTTCAATTTTTTTTTTTGGGGGGGGGCACCGCGTATCTGCTT
GGAATCCCGTATCCGCCGTGCCCCTGTGTCCGCCGTGCCCCTGTGCCCCT
GTGAACTGCGAACACAGGGGCACGGCGGATACGGGATCCCAAGCAGATAC
GCGGCTCCCCCCCCCCTCGGATAAAATTGAAAAAAATCGCAGTGGGAAGG
ACTGCAACGGAGGCTTATCTGAACATATGATTTCCGTTTGGACATCTTTT
CAGATTCTGCCCTTGGTTTCAATTATTTTCTGCCTACGTATGATGTTTTA
ATGGGGTTGATATCCTTTAACTACTCTGCTTGTAACGGTAATTGAAGCAG
CTTGTGCACAACCTTTATCAGTACAAACATGATTCAGTTATAACCTGTTC
CCAGAAGGACATTAAATAATGATATATTATTTAATATATCTTTGCAATTA
CCATGTACAGTTACTTTGAATCAAATTTAAGTTTATATCATACTTAACTA
ATGAGTGAGAGTAGAGTACAAGTCTAAGCAAAAGTTATTCGGATGGAGTA
AAAAGCCTTACCGTCTGATGAAAATATATCATATATTTTATTTTATATTA
ATCAAAGGGGTATTATATATATATATTCTAAAGGTTGCATTGCTAGCTAC
ACTGCATACGGAGGTGCATGCTTCAAGGCGTACAACCAAGACAAAACCTA
CAACCAGGCCAGACAGGTGTGTGCAGCGGATGGGGGGCTTCTGGCCATGC
CGAAGGACAGACACGTGGATACATTCCTGAGGGATCTGAAGAACGCCGTG
AATGAAATGTCACCTTTCTGGTTTGGCCTAAGTGATCAGAACGATGAGGG
TGAGTGGATGTGGGAAGATGGAACTCCGCACGACATAATTACTGACTGGA
ACCGCTGGCAGCTGGGGGAACCTAATGATAACCAGGGAGAGGACTGTGTC
AACTACTATGGCTCAGACTGGAATGATGCCCAGTGCTCCACTGCTTACAA
GTTTATCTGCCAGCTGAAAGAGGGTATGTCCCATAAGATTTTATACAGTG
AACATCACTCAGACATTTACGTTGTTCCTTTTTTCTTCTGAAATAGTACA
AATCCTCCATTGAAGCTTCGAAGATTTAGGCCAAGTTATAAAATGATCTT
ATAATTTCTTTTGGTTATCTCATGCGGCACTTGAGTCTGGTTATAGGTTA
CAATTCCCTCCAGATCGTAGCCTTATCAATATTTATTCAGTATTATATAT
AATATTAGTTTTTATGTTAATCGAAAACTTGAGCTTTCCTTTTTCGCTAG
ACATACAATGACTAATTCAGCACCTTTAAGAACCAAAATTATAAGCTGTC
TACATACACAGCAATCAGCTGCTCGCTAGGATACTACCGCTGTGGACATG
GACTTGCATGTATCCTGTCGTGGAAGCGTTGTGATGGGGTCATGGACTGC
ACAGACGGGAGTGACGA Coding sequence (CDS) from alignment at xfSc0000000:25409..27475- >transcript:BL96303_cuf1 ID=transcript:BL96303_cuf1|Name=transcript:BL96303_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1809bp|location=Sequence derived from alignment at xfSc0000000:25409..27475- (Branchiostoma lanceolatum)
GCGTGTTCCTCGTCCAATGGAGGGTGTCAGGAACTGTGCCTTGCGCATCC
TGAAGGAATGACATGCGCCTGTCGGGATACCTGGGAACTGCAGGAAGACG
GAGTGACTTGTTGCATTGCTAGCTACACTGCATACGGAGGTGCATGCTTC
AAGGCGTACAACCAAGACAAAACCTACAACCAGGCCAGACAGGTGTGTGC
AGCGGATGGGGGGCTTCTGGCCATGCCGAAGGACAGACACGTGGATACAT
TCCTGAGGGATCTGAAGAACGCCGTGAATGAAATGTCACCTTTCTGGTTT
GGCCTAAGTGATCAGAACGATGAGGGTGAGTGGATGTGGGAAGATGGAAC
TCCGCACGACATAATTACTGACTGGAACCGCTGGCAGCTGGGGGAACCTA
ATGATAACCAGGGAGAGGACTGTGTCAACTACTATGGCTCAGACTGGAAT
GATGCCCAGTGCTCCACTGCTTACAAGTTTATCTGCCAGCTGAAAGAGGC
AATCAGCTGCTCGCTAGGATACTACCGCTGTGGACATGGACTTGCATGTA
TCCTGTCGTGGAAGCGTTGTGATGGGGTCATGGACTGCACAGACGGGAGT
GACGCGTGTTCCTCGTCCAATGGAGGGTGTCAGGAACTGTGCCTTGCGCA
TCCTGAAGGAATGACATGCGCCTGTCGGGATACCTGGGAACTGCAGGAAG
ACGGAGTGACTTGTTGCATTGCTAGCTACACTGCATACGGAGGTGCATGC
TTCAAGGCGTACAACCAAGACAAAACCTACAACCAGGCCAGACAGGTGTG
TGCAGCGGATGGGGGGCTTCTGGCCATGCCGAAGGACAGACACGTGGATA
CATTCCTGAGGGATCTGAAGAACGCCGTGAATGAAATGTCACCTTTCTGG
TTTGGCCTAAGTGATCAGAACGATGAGGGTGAGTGGATGTGGGAAGATGG
AACTCCGCACGACATAATTACTGACTGGAACCGCTGGCAGCTGGGGGAAC
CTAATGATAACCAGGGAGAGGACTGTGTCAACTACTATGGCTCAGACTGG
AATGATGCCCAGTGCTCCACTGCTTACAAGTTTATCTGCCAGCTGAAAGA
GGCAATCAGCTGCTCGCTAGGATACTACCGCTGTGGACATGGACTTGCAT
GTATCCTGTCGTGGAAGCGTTGTGATGGGGTCATGGACTGCACAGACGGG
AGTGACGCGTGTTCCTCGTCCAATGGAGGGTGTCAGGAACTGTGCCTTGC
GCATCCTGAAGGAATGACATGCGCCTGTCGGGATACCTGGGAACTGCAGG
AAGACGGAGTGACTTGTTGCATTGCTAGCTACACTGCATACGGAGGTGCA
TGCTTCAAGGCGTACAACCAAGACAAAACCTACAACCAGGCCAGACAGGT
GTGTGCAGCGGATGGGGGGCTTCTGGCCATGCCGAAGGACAGACACGTGG
ATACATTCCTGAGGGATCTGAAGAACGCCGTGAATGAAATGTCACCTTTC
TGGTTTGGCCTAAGTGATCAGAACGATGAGGGTGAGTGGATGTGGGAAGA
TGGAACTCCGCACGACATAATTACTGACTGGAACCGCTGGCAGCTGGGGG
AACCTAATGATAACCAGGGAGAGGACTGTGTCAACTACTATGGCTCAGAC
TGGAATGATGCCCAGTGCTCCACTGCTTACAAGTTTATCTGCCAGCTGAA
AGAGGCAATCAGCTGCTCGCTAGGATACTACCGCTGTGGACATGGACTTG
CATGTATCCTGTCGTGGAAGCGTTGTGATGGGGTCATGGACTGCACAGAC
GGGAGTGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000000 | genome | xfSc0000000:25409..27475 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96303_cuf1 |
| Biotype | protein_coding |
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