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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95933_evm1 >transcript:BL95933_evm1-protein ID=transcript:BL95933_evm1-protein|Name=transcript:BL95933_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=316bp
MFRLSWVVLFGIFLTKLWTPVRGLYVDDGNPYDEGNLEVLTLSISQNDAP
MLTKVHYPTRIDTYAVLFFTGGYQGDMPSEWYSDVLVRVASHGFVVIGVD
YIQLVTANVRDRTLRLGGDHTQKYVEELQWVTKHLEGRIAKQLNRTGLVP
DFSHLAIGCHSAGCDPLVKMTLQNHTFSKAALMLEPFSFNYATPVTFKMP
AFILGTELSTEPHACVRPGQGYNHFYNMWRCPRIVMEVKGHGHCDVFNES
WYKVCQLTHFCKTNSDVDINKYHIFIQGISAAFLTTTLQGRDKLQYITNT
TALPVELLEFKIDLDC Run BLAST on NCBI mRNA from alignment at Sc0000222:321831..324549+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95933_evm1 ID=transcript:BL95933_evm1|Name=transcript:BL95933_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2719bp|location=Sequence derived from alignment at Sc0000222:321831..324549+ (Branchiostoma lanceolatum)
ATGTTCCGACTTTCTTGGGTTGTACTCTTCGGAATCTTCCTCACCAAGCT
GTGGACCCCAGGTGAGCTTTTTAAAAGCTGATTCTTGATGTCACTTGAGT
TACTTTTCCCATTTGGCTTATTTCTACTTTTTTCCTATGCATTGAAAACG
CCAAATCAGAGCCCAATCAACGTTACGGCTCATATGTGGCAATATTCTTT
GGAGGTTTGTAAGGGAATCTTAATGTATCTTTAAGTTGCCATTGAAAGTA
CTCAGTTCTCTCTCTCCTTGTGTATATCCCGCCCTGTCTTTTCTCTTTTT
CTCAGTCCGAGGCCTCTACGTGGACGATGGAAATCCGTACGATGAAGGAA
ACCTGGAAGTCCTGACGTTGTCTATCAGCCAGAATGACGCTCCTATGCTC
ACAAAAGGTAATGCAGATATCAACATAAATGATACAAATGTGTTCCTATA
AGAAAGAATGCCAGAGCTATATGTACGTGGACTAACTCCTGTTAATGCTG
TATAAGATAGTCAAACCGTCCTTTTTCAATATCTTTGTTGGTACCACCAT
TATTGTCATTTTTTGTTATTATTGTTATTATTGTCATTTCTTGTTTGTAT
TGTGATAATATATTAGTGATGATTCTTTACTTGTTTTTAAATGTACTCTG
GAGGTGTTGGCCTTGTAAAGGATGCATCGATCCTGTTGCCAACACCTCTC
AGATTTCATTCTGTGAAGTTTAATAGAGAGATAGATAAAGAGCTATATGT
TGTGATTTTTACGACGAGGAATGACAACAAATGTTATTTTCACTCCGAAA
TACTCTACAGTTCATTACCCAACGAGGATCGACACATATGCCGTCCTCTT
CTTCACTGGAGGCTACCAGGGTGACATGCCATCAGAATGGTACAGTGACG
TGTTGGTACGGGTGGCCAGTCATGGGTTTGTGGTCATCGGTGTAGACTAC
ATACAACTGGTAACAGCTAACGTGAGGGACAGGACTCTGAGGCTTGGAGG
CGACCACACACAGAAATACGTTGAAGAACTGCAGTGGGTACGTGGTAGAT
TAACTTTATCAGCTTTGATTTGAGGCATATGTCCTATACACCACATATCT
CATGATGTCGCACAGAAAATATGTCGACTGTACCTCCCCCCTTTACTCTT
CTATTTGCTTTCAAAGATATTACGGGTTGGAAAATACAAATACCAAAAAA
GCCAAACGGTTACGTTGCATCGATGAGTACCATAGTTAGATTTACTTAGT
TTTTATGATAGTTTATTTCCTTATAGCGGATTTAGATTACACCGAGATTG
AGCGTTTCCTTTAAGTCTTAATTAGTTTGTAGACATCATACAGAAACACG
AAGGTGTTTCACATACAGGTAACAAAGCACCTGGAGGGACGAATCGCCAA
GCAGCTCAACCGAACCGGACTGGTGCCCGACTTCAGCCACCTCGCGATCG
GCTGCCACTCAGCGGGATGTGACCCTCTGGTTAAGATGACCTTGCAGAAT
CACACCTTCTCAAAGGTTAGAGACTAATAAAGCAATTCTTACTGTTGATA
CGCGTAAACAAAGAACTGTAGCAGATGTTGAAGAAGCATGTTTGAGTGCT
CTTACAGTGCATTTAGCGATTTGAAAAGGTCACCGAATGAGCAGGAGTTC
CCTGACGTACAACGTAAGAAAGTATCAGTCTTTCAATTTTCATTCAACAG
GCAGCACTAATGCTAGAGCCATTTAGCTTTAACTATGCAACCCCGGTGAC
GTTCAAAATGCCTGCCTTCATACTCGGGACGGAGTTGTCGACAGAACCGC
ACGCGTGCGTCCGTCCTGGCCAGGGGTACAACCATTTCTACAATATGTGG
AGGTGTCCGCGAATTGTGATGGAGGTCAAGGTAAGCATACAGTATACCGA
TTTTGCTTTACCTTGAACAATAAGCGAAGAGGCTCATTTCTATCATATCA
CATCATATCATATCATATAATATAATATCACATTTCAATTGAGATAAGAG
AAGATAGTTGCATGTTCAGAACTGGTCTATTGTCTTACGATTTTGAATTT
CCACAGGGCCATGGTCACTGCGATGTGTTTAACGAATCTTGGTATAAAGG
TAAGATGCAATTTTCGTGCCCTTCTAAAATCCGTATGATACAATGGAGGC
ACAGTACCAACCGGAAACTTTTGATTCTTAACTAACGCCGCCGTCTATCA
AAACGAGTAGGGAGAAAGGAATAGTAGAAATTAAAAACGTTTGAGCTAAA
GTGATTAATGGTAGACACGTGCAATGCATCCACAATACTAAGGCTGGTAA
GTTCGAATTCTTACATTGATTATCCATGCCATTTTGACTTATATGGTACT
CAAAGAAAATCAAATCACTTTTATTCACAGAGAAGAATTCTTGCTTACTT
CATTCAGCACTGAGAAACATTTTAGATAGGGATATTGATTTTGATTGTAT
GAGTAGGCTTATGACATTTTCTACCATGTACCTGTTCCTAACATAACATA
TGCGAGATTTTTGCTGTCCCGCTCGTAGTGTGTCAGCTAACCCACTTCTG
CAAGACCAACTCAGACGTCGACATCAACAAGTACCACATATTCATCCAGG
GCATCAGCGCAGCCTTCCTCACCACCACCCTACAGGGGCGTGACAAGCTA
CAGTACATCACCAACACCACCGCACTGCCTGTAGAGCTGCTGGAGTTTAA
GATAGACTTAGACTGTTGA Coding sequence (CDS) from alignment at Sc0000222:321831..324549+ >transcript:BL95933_evm1 ID=transcript:BL95933_evm1|Name=transcript:BL95933_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=6657bp|location=Sequence derived from alignment at Sc0000222:321831..324549+ (Branchiostoma lanceolatum)
ATGTTCCGACTTTCTTGGGTTGTACTCTTCGGAATCTTCCTCACCAAGCT
GTGGACCCCAGTCCGAGGCCTCTACGTGGACGATGGAAATCCGTACGATG
AAGGAAACCTGGAAGTCCTGACGTTGTCTATCAGCCAGAATGACGCTCCT
ATGCTCACAAAAGTTCATTACCCAACGAGGATCGACACATATGCCGTCCT
CTTCTTCACTGGAGGCTACCAGGGTGACATGCCATCAGAATGGTACAGTG
ACGTGTTGGTACGGGTGGCCAGTCATGGGTTTGTGGTCATCGGTGTAGAC
TACATACAACTGGTAACAGCTAACGTGAGGGACAGGACTCTGAGGCTTGG
AGGCGACCACACACAGAAATACGTTGAAGAACTGCAGTGGGTAACAAAGC
ACCTGGAGGGACGAATCGCCAAGCAGCTCAACCGAACCGGACTGGTGCCC
GACTTCAGCCACCTCGCGATCGGCTGCCACTCAGCGGGATGTGACCCTCT
GGTTAAGATGACCTTGCAGAATCACACCTTCTCAAAGGCAGCACTAATGC
TAGAGCCATTTAGCTTTAACTATGCAACCCCGGTGACGTTCAAAATGCCT
GCCTTCATACTCGGGACGGAGTTGTCGACAGAACCGCACGCGTGCGTCCG
TCCTGGCCAGGGGTACAACCATTTCTACAATATGTGGAGGTGTCCGCGAA
TTGTGATGGAGGTCAAGGGCCATGGTCACTGCGATGTGTTTAACGAATCT
TGGTATAAAGTGTGTCAGCTAACCCACTTCTGCAAGACCAACTCAGACGT
CGACATCAACAAGTACCACATATTCATCCAGGGCATCAGCGCAGCCTTCC
TCACCACCACCCTACAGGGGCGTGACAAGCTACAGTACATCACCAACACC
ACCGCACTGCCTGTAGAGCTGCTGGAGTTTAAGATAGACTTAGACTGTTG
AATGTTCCGACTTTCTTGGGTTGTACTCTTCGGAATCTTCCTCACCAAGC
TGTGGACCCCAGTCCGAGGCCTCTACGTGGACGATGGAAATCCGTACGAT
GAAGGAAACCTGGAAGTCCTGACGTTGTCTATCAGCCAGAATGACGCTCC
TATGCTCACAAAAGTTCATTACCCAACGAGGATCGACACATATGCCGTCC
TCTTCTTCACTGGAGGCTACCAGGGTGACATGCCATCAGAATGGTACAGT
GACGTGTTGGTACGGGTGGCCAGTCATGGGTTTGTGGTCATCGGTGTAGA
CTACATACAACTGGTAACAGCTAACGTGAGGGACAGGACTCTGAGGCTTG
GAGGCGACCACACACAGAAATACGTTGAAGAACTGCAGTGGGTAACAAAG
CACCTGGAGGGACGAATCGCCAAGCAGCTCAACCGAACCGGACTGGTGCC
CGACTTCAGCCACCTCGCGATCGGCTGCCACTCAGCGGGATGTGACCCTC
TGGTTAAGATGACCTTGCAGAATCACACCTTCTCAAAGGCAGCACTAATG
CTAGAGCCATTTAGCTTTAACTATGCAACCCCGGTGACGTTCAAAATGCC
TGCCTTCATACTCGGGACGGAGTTGTCGACAGAACCGCACGCGTGCGTCC
GTCCTGGCCAGGGGTACAACCATTTCTACAATATGTGGAGGTGTCCGCGA
ATTGTGATGGAGGTCAAGGGCCATGGTCACTGCGATGTGTTTAACGAATC
TTGGTATAAAGTGTGTCAGCTAACCCACTTCTGCAAGACCAACTCAGACG
TCGACATCAACAAGTACCACATATTCATCCAGGGCATCAGCGCAGCCTTC
CTCACCACCACCCTACAGGGGCGTGACAAGCTACAGTACATCACCAACAC
CACCGCACTGCCTGTAGAGCTGCTGGAGTTTAAGATAGACTTAGACTGTT
GAATGTTCCGACTTTCTTGGGTTGTACTCTTCGGAATCTTCCTCACCAAG
CTGTGGACCCCAGTCCGAGGCCTCTACGTGGACGATGGAAATCCGTACGA
TGAAGGAAACCTGGAAGTCCTGACGTTGTCTATCAGCCAGAATGACGCTC
CTATGCTCACAAAAGTTCATTACCCAACGAGGATCGACACATATGCCGTC
CTCTTCTTCACTGGAGGCTACCAGGGTGACATGCCATCAGAATGGTACAG
TGACGTGTTGGTACGGGTGGCCAGTCATGGGTTTGTGGTCATCGGTGTAG
ACTACATACAACTGGTAACAGCTAACGTGAGGGACAGGACTCTGAGGCTT
GGAGGCGACCACACACAGAAATACGTTGAAGAACTGCAGTGGGTAACAAA
GCACCTGGAGGGACGAATCGCCAAGCAGCTCAACCGAACCGGACTGGTGC
CCGACTTCAGCCACCTCGCGATCGGCTGCCACTCAGCGGGATGTGACCCT
CTGGTTAAGATGACCTTGCAGAATCACACCTTCTCAAAGGCAGCACTAAT
GCTAGAGCCATTTAGCTTTAACTATGCAACCCCGGTGACGTTCAAAATGC
CTGCCTTCATACTCGGGACGGAGTTGTCGACAGAACCGCACGCGTGCGTC
CGTCCTGGCCAGGGGTACAACCATTTCTACAATATGTGGAGGTGTCCGCG
AATTGTGATGGAGGTCAAGGGCCATGGTCACTGCGATGTGTTTAACGAAT
CTTGGTATAAAGTGTGTCAGCTAACCCACTTCTGCAAGACCAACTCAGAC
GTCGACATCAACAAGTACCACATATTCATCCAGGGCATCAGCGCAGCCTT
CCTCACCACCACCCTACAGGGGCGTGACAAGCTACAGTACATCACCAACA
CCACCGCACTGCCTGTAGAGCTGCTGGAGTTTAAGATAGACTTAGACTGT
TGAATGTTCCGACTTTCTTGGGTTGTACTCTTCGGAATCTTCCTCACCAA
GCTGTGGACCCCAGTCCGAGGCCTCTACGTGGACGATGGAAATCCGTACG
ATGAAGGAAACCTGGAAGTCCTGACGTTGTCTATCAGCCAGAATGACGCT
CCTATGCTCACAAAAGTTCATTACCCAACGAGGATCGACACATATGCCGT
CCTCTTCTTCACTGGAGGCTACCAGGGTGACATGCCATCAGAATGGTACA
GTGACGTGTTGGTACGGGTGGCCAGTCATGGGTTTGTGGTCATCGGTGTA
GACTACATACAACTGGTAACAGCTAACGTGAGGGACAGGACTCTGAGGCT
TGGAGGCGACCACACACAGAAATACGTTGAAGAACTGCAGTGGGTAACAA
AGCACCTGGAGGGACGAATCGCCAAGCAGCTCAACCGAACCGGACTGGTG
CCCGACTTCAGCCACCTCGCGATCGGCTGCCACTCAGCGGGATGTGACCC
TCTGGTTAAGATGACCTTGCAGAATCACACCTTCTCAAAGGCAGCACTAA
TGCTAGAGCCATTTAGCTTTAACTATGCAACCCCGGTGACGTTCAAAATG
CCTGCCTTCATACTCGGGACGGAGTTGTCGACAGAACCGCACGCGTGCGT
CCGTCCTGGCCAGGGGTACAACCATTTCTACAATATGTGGAGGTGTCCGC
GAATTGTGATGGAGGTCAAGGGCCATGGTCACTGCGATGTGTTTAACGAA
TCTTGGTATAAAGTGTGTCAGCTAACCCACTTCTGCAAGACCAACTCAGA
CGTCGACATCAACAAGTACCACATATTCATCCAGGGCATCAGCGCAGCCT
TCCTCACCACCACCCTACAGGGGCGTGACAAGCTACAGTACATCACCAAC
ACCACCGCACTGCCTGTAGAGCTGCTGGAGTTTAAGATAGACTTAGACTG
TTGAATGTTCCGACTTTCTTGGGTTGTACTCTTCGGAATCTTCCTCACCA
AGCTGTGGACCCCAGTCCGAGGCCTCTACGTGGACGATGGAAATCCGTAC
GATGAAGGAAACCTGGAAGTCCTGACGTTGTCTATCAGCCAGAATGACGC
TCCTATGCTCACAAAAGTTCATTACCCAACGAGGATCGACACATATGCCG
TCCTCTTCTTCACTGGAGGCTACCAGGGTGACATGCCATCAGAATGGTAC
AGTGACGTGTTGGTACGGGTGGCCAGTCATGGGTTTGTGGTCATCGGTGT
AGACTACATACAACTGGTAACAGCTAACGTGAGGGACAGGACTCTGAGGC
TTGGAGGCGACCACACACAGAAATACGTTGAAGAACTGCAGTGGGTAACA
AAGCACCTGGAGGGACGAATCGCCAAGCAGCTCAACCGAACCGGACTGGT
GCCCGACTTCAGCCACCTCGCGATCGGCTGCCACTCAGCGGGATGTGACC
CTCTGGTTAAGATGACCTTGCAGAATCACACCTTCTCAAAGGCAGCACTA
ATGCTAGAGCCATTTAGCTTTAACTATGCAACCCCGGTGACGTTCAAAAT
GCCTGCCTTCATACTCGGGACGGAGTTGTCGACAGAACCGCACGCGTGCG
TCCGTCCTGGCCAGGGGTACAACCATTTCTACAATATGTGGAGGTGTCCG
CGAATTGTGATGGAGGTCAAGGGCCATGGTCACTGCGATGTGTTTAACGA
ATCTTGGTATAAAGTGTGTCAGCTAACCCACTTCTGCAAGACCAACTCAG
ACGTCGACATCAACAAGTACCACATATTCATCCAGGGCATCAGCGCAGCC
TTCCTCACCACCACCCTACAGGGGCGTGACAAGCTACAGTACATCACCAA
CACCACCGCACTGCCTGTAGAGCTGCTGGAGTTTAAGATAGACTTAGACT
GTTGAATGTTCCGACTTTCTTGGGTTGTACTCTTCGGAATCTTCCTCACC
AAGCTGTGGACCCCAGTCCGAGGCCTCTACGTGGACGATGGAAATCCGTA
CGATGAAGGAAACCTGGAAGTCCTGACGTTGTCTATCAGCCAGAATGACG
CTCCTATGCTCACAAAAGTTCATTACCCAACGAGGATCGACACATATGCC
GTCCTCTTCTTCACTGGAGGCTACCAGGGTGACATGCCATCAGAATGGTA
CAGTGACGTGTTGGTACGGGTGGCCAGTCATGGGTTTGTGGTCATCGGTG
TAGACTACATACAACTGGTAACAGCTAACGTGAGGGACAGGACTCTGAGG
CTTGGAGGCGACCACACACAGAAATACGTTGAAGAACTGCAGTGGGTAAC
AAAGCACCTGGAGGGACGAATCGCCAAGCAGCTCAACCGAACCGGACTGG
TGCCCGACTTCAGCCACCTCGCGATCGGCTGCCACTCAGCGGGATGTGAC
CCTCTGGTTAAGATGACCTTGCAGAATCACACCTTCTCAAAGGCAGCACT
AATGCTAGAGCCATTTAGCTTTAACTATGCAACCCCGGTGACGTTCAAAA
TGCCTGCCTTCATACTCGGGACGGAGTTGTCGACAGAACCGCACGCGTGC
GTCCGTCCTGGCCAGGGGTACAACCATTTCTACAATATGTGGAGGTGTCC
GCGAATTGTGATGGAGGTCAAGGGCCATGGTCACTGCGATGTGTTTAACG
AATCTTGGTATAAAGTGTGTCAGCTAACCCACTTCTGCAAGACCAACTCA
GACGTCGACATCAACAAGTACCACATATTCATCCAGGGCATCAGCGCAGC
CTTCCTCACCACCACCCTACAGGGGCGTGACAAGCTACAGTACATCACCA
ACACCACCGCACTGCCTGTAGAGCTGCTGGAGTTTAAGATAGACTTAGAC
TGTTGAATGTTCCGACTTTCTTGGGTTGTACTCTTCGGAATCTTCCTCAC
CAAGCTGTGGACCCCAGTCCGAGGCCTCTACGTGGACGATGGAAATCCGT
ACGATGAAGGAAACCTGGAAGTCCTGACGTTGTCTATCAGCCAGAATGAC
GCTCCTATGCTCACAAAAGTTCATTACCCAACGAGGATCGACACATATGC
CGTCCTCTTCTTCACTGGAGGCTACCAGGGTGACATGCCATCAGAATGGT
ACAGTGACGTGTTGGTACGGGTGGCCAGTCATGGGTTTGTGGTCATCGGT
GTAGACTACATACAACTGGTAACAGCTAACGTGAGGGACAGGACTCTGAG
GCTTGGAGGCGACCACACACAGAAATACGTTGAAGAACTGCAGTGGGTAA
CAAAGCACCTGGAGGGACGAATCGCCAAGCAGCTCAACCGAACCGGACTG
GTGCCCGACTTCAGCCACCTCGCGATCGGCTGCCACTCAGCGGGATGTGA
CCCTCTGGTTAAGATGACCTTGCAGAATCACACCTTCTCAAAGGCAGCAC
TAATGCTAGAGCCATTTAGCTTTAACTATGCAACCCCGGTGACGTTCAAA
ATGCCTGCCTTCATACTCGGGACGGAGTTGTCGACAGAACCGCACGCGTG
CGTCCGTCCTGGCCAGGGGTACAACCATTTCTACAATATGTGGAGGTGTC
CGCGAATTGTGATGGAGGTCAAGGGCCATGGTCACTGCGATGTGTTTAAC
GAATCTTGGTATAAAGTGTGTCAGCTAACCCACTTCTGCAAGACCAACTC
AGACGTCGACATCAACAAGTACCACATATTCATCCAGGGCATCAGCGCAG
CCTTCCTCACCACCACCCTACAGGGGCGTGACAAGCTACAGTACATCACC
AACACCACCGCACTGCCTGTAGAGCTGCTGGAGTTTAAGATAGACTTAGA
CTGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000222 | genome | Sc0000222:321831..324549 + |
Properties
| Property Name | Value |
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| Transcript id | BL95933_evm1 |
| Biotype | protein_coding |
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