TCONS_00039798 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039798
Unique NameTCONS_00039798
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039798 ID=TCONS_00039798|Name=TCONS_00039798|organism=Clytia hemisphaerica|type=transcript|length=193bp
CAGTAAGTCCTAAGTAAGACACTAAACTGTTCCCGGGCTCCTTTGAGCAA
GGTCAGCACCTGGAAGCTCCCCTTTGTCAGGGTTACGACGAAGTTAATTA
ACGTATAATGGCAATTACAAGAGGTACGTGTGTACGAATTTTTGTGATTT
GCGGGTATTTGTGAGAAAATACGAATGTTGTGACTTACAAATA
Run BLAST on NCBI

transcript from alignment at sc0002202:13494..13686

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039798 ID=TCONS_00039798|Name=TCONS_00039798|organism=Clytia hemisphaerica|type=transcript|length=193bp|location=Sequence derived from alignment at sc0002202:13494..13686 (Clytia hemisphaerica)
TATTTGTAAGTCACAACATTCGTATTTTCTCACAAATACCCGCAAATCAC
AAAAATTCGTACACACGTACCTCTTGTAATTGCCATTATACGTTAATTAA
CTTCGTCGTAACCCTGACAAAGGGGAGCTTCCAGGTGCTGACCTTGCTCA
AAGGAGCCCGGGAACAGTTTAGTGTCTTACTTAGGACTTACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024080XLOC_024080Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039798-exon-sc0002202-1491911889:13494..13686TCONS_00039798-exon-sc0002202-1491911889:13494..13686Clytia hemisphaericaexon
TCONS_00039798-exon-sc0002202-1510915933:13494..13686TCONS_00039798-exon-sc0002202-1510915933:13494..13686Clytia hemisphaericaexon
TCONS_00039798-exon-sc0002202-1575043694:13494..13686TCONS_00039798-exon-sc0002202-1575043694:13494..13686Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002202supercontigsc0002202:13494..13686 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039798 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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