|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:1160908..1162316+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008429 ID=XLOC_008429|Name=XLOC_008429|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1409bp|location=Sequence derived from alignment at sc0000018_pilon:1160908..1162316+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCCACCAAGCAGATCATCAACTGTAGCTACAAGTTTCTTACTTCC
ACCACATCAATtatttgtaagtattttttgttgttgtgatttttttttct
tacttgcttgatactactcaaacttttttccaaactttgttttttatctt
tttcgatttgccgtatgatttttcgattttcgaaatctttttttctctct
cttgtatgtttttGCATGAGTTGTTTGTACATTGTTGaaatgaaatcaag
ttgaggtaAAGAGCGATTTTTCTAgtttataattatgaaaatataaagat
gctttttttgaacgttatgactaaatttttgttcttatttcatttttgtt
cttatttcatttttgtAGGAACACAACAAACATTCACCACTTGCTATGCT
CGCTGCTACATGCAAGAAAATTGGAAGACCAAACAGCCCACCAGATACTG
AATATCAACCACCAGCcaagaaactttttcaaccttGGAATCGCACTAGC
CAAGCTCCTCTGTCACCTACATCTAAAGTACGCAGCTATCTTGAATCAAC
AAATTTTAGCATGCCCCCAAGTCCGCCACTCAAACCAGACTTGGTAAAAC
CAGCTTTCAGCACCAGCGAAACTACAGCTTTTACAAGCCATGCTCCAACC
ACACTCCGTGTTCCATCACCACCATGCTCAGCCTGTGCTGCCAGTCAACG
CTGCCCTCAACCGCTTCCAAAAAGAATGTCACCAATTCCAACTTTGACTC
CGCCAAGCTCCCCACCAAGCACTATCCGCCCATCATTGTGGACATTACCC
TCACCATACTCAGTCCGCACCCTTGAAAACTCATCAACAGTAGCACCAAG
CACAATTACATCACCAACTATTGTCCGCCCATCTCCATACCCAATCACAT
CAAGTGCAGGCAACCCACCACCAACCACAGCAGTGGCACCACAAGTCCCA
ACCAGTGTCACACGTCGCTGTCGTCGCTGCAAATGCCCTAACTGTCTTTC
AGGGCAACCATCAGAACCAAACAAGCCAAAACAACATCTTTGTCACATCC
CTGGATGTGGAAAAGTTTATGGCAAAACCAGTCACTTGAAGGCTCATCTC
AGATGGCATGCTGGACTCAGACCATTTGTCTGCAACTGGCTTTTCTGTAA
CAAATCTTTTACTCGATCTGATGAACTTCAGCGACACTTACGTACACACA
CTGGTGAAAAGAGATTCGCATGTCAAGAGTGTGGTAAAAGGTTTACACGC
TCTGATCATCTCTCcaaacacatgaaaacccaccaaaataaagcagctaa
ggacaaaacacaacaacaaaaacaacaatctcaacaacaaTCTCGACCAG
TTGTCCAAGAAACCCCAACAGACATTGAAATTGATGAGGATATCAATGTT
GAGAACTAA Coding sequence (CDS) from alignment at sc0000018_pilon:1160908..1162316+ >XLOC_008429 ID=XLOC_008429|Name=XLOC_008429|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2214bp|location=Sequence derived from alignment at sc0000018_pilon:1160908..1162316+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCCACCAAGCAGATCATCAACTGTAGCTACAAGTTTCTTACTTCC
ACCACATCAATtatttATGTCTCCACCAAGCAGATCATCAACTGTAGCTA
CAAGTTTCTTACTTCCACCACATCAATtatttGAACACAACAAACATTCA
CCACTTGCTATGCTCGCTGCTACATGCAAGAAAATTGGAAGACCAAACAG
CCCACCAGATACTGAATATCAACCACCAGCcaagaaactttttcaacctt
GGAATCGCACTAGCCAAGCTCCTCTGTCACCTACATCTAAAGTACGCAGC
TATCTTGAATCAACAAATTTTAGCATGCCCCCAAGTCCGCCACTCAAACC
AGACTTGGTAAAACCAGCTTTCAGCACCAGCGAAACTACAGCTTTTACAA
GCCATGCTCCAACCACACTCCGTGTTCCATCACCACCATGCTCAGCCTGT
GCTGCCAGTCAACGCTGCCCTCAACCGCTTCCAAAAAGAATGTCACCAAT
TCCAACTTTGACTCCGCCAAGCTCCCCACCAAGCACTATCCGCCCATCAT
TGTGGACATTACCCTCACCATACTCAGTCCGCACCCTTGAAAACTCATCA
ACAGTAGCACCAAGCACAATTACATCACCAACTATTGTCCGCCCATCTCC
ATACCCAATCACATCAAGTGCAGGCAACCCACCACCAACCACAGCAGTGG
CACCACAAGTCCCAACCAGTGTCACACGTCGCTGTCGTCGCTGCAAATGC
CCTAACTGTCTTTCAGGGCAACCATCAGAACCAAACAAGCCAAAACAACA
TCTTTGTCACATCCCTGGATGTGGAAAAGTTTATGGCAAAACCAGTCACT
TGAAGGCTCATCTCAGATGGCATGCTGGACTCAGACCATTTGTCTGCAAC
TGGCTTTTCTGTAACAAATCTTTTACTCGATCTGATGAACTTCAGCGACA
CTTACGTACACACACTGGTGAAAAGAGATTCGCATGTCAAGAGTGTGGTA
AAAGGTTTACACGCTCTGATCATCTCTCcaaacacatgaaaacccaccaa
aataaagcagctaaggacaaaacacaacaacaaaaacaacaatctcaaca
acaaTCTCGACCAGTTGTCCAAGAAACCCCAACAGACATTGAAATTGATG
AGGATATCAATGTTGAGAACTAAGAACACAACAAACATTCACCACTTGCT
ATGCTCGCTGCTACATGCAAGAAAATTGGAAGACCAAACAGCCCACCAGA
TACTGAATATCAACCACCAGCcaagaaactttttcaaccttGGAATCGCA
CTAGCCAAGCTCCTCTGTCACCTACATCTAAAGTACGCAGCTATCTTGAA
TCAACAAATTTTAGCATGCCCCCAAGTCCGCCACTCAAACCAGACTTGGT
AAAACCAGCTTTCAGCACCAGCGAAACTACAGCTTTTACAAGCCATGCTC
CAACCACACTCCGTGTTCCATCACCACCATGCTCAGCCTGTGCTGCCAGT
CAACGCTGCCCTCAACCGCTTCCAAAAAGAATGTCACCAATTCCAACTTT
GACTCCGCCAAGCTCCCCACCAAGCACTATCCGCCCATCATTGTGGACAT
TACCCTCACCATACTCAGTCCGCACCCTTGAAAACTCATCAACAGTAGCA
CCAAGCACAATTACATCACCAACTATTGTCCGCCCATCTCCATACCCAAT
CACATCAAGTGCAGGCAACCCACCACCAACCACAGCAGTGGCACCACAAG
TCCCAACCAGTGTCACACGTCGCTGTCGTCGCTGCAAATGCCCTAACTGT
CTTTCAGGGCAACCATCAGAACCAAACAAGCCAAAACAACATCTTTGTCA
CATCCCTGGATGTGGAAAAGTTTATGGCAAAACCAGTCACTTGAAGGCTC
ATCTCAGATGGCATGCTGGACTCAGACCATTTGTCTGCAACTGGCTTTTC
TGTAACAAATCTTTTACTCGATCTGATGAACTTCAGCGACACTTACGTAC
ACACACTGGTGAAAAGAGATTCGCATGTCAAGAGTGTGGTAAAAGGTTTA
CACGCTCTGATCATCTCTCcaaacacatgaaaacccaccaaaataaagca
gctaaggacaaaacacaacaacaaaaacaacaatctcaacaacaaTCTCG
ACCAGTTGTCCAAGAAACCCCAACAGACATTGAAATTGATGAGGATATCA
ATGTTGAGAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:1160908..1162316 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 67-1107:369 |
| Aaloc | 1-66:1 |
|
