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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:1274479..1280359+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008423 ID=XLOC_008423|Name=XLOC_008423|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5881bp|location=Sequence derived from alignment at sc0000018_pilon:1274479..1280359+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcatCAAACTATCATCAAATTGCTATCCCAAAGAATATATCTGACGA
TACTATTTTGTATTGTATTGAAACTGTGGCCAATATGAAATTGAGTCCAA
ATGATCTGAAGAATCCTACTGTGAGTATGTTTTTATGGCAAGacaaataa
tcagaaaattttagataaaaaaaaaaattgacattttttcttgagatttt
tattttcatcaactCATGCATCGAAATAAGGGTTGGAAAGTGCATAACAC
tttttttGGCAAGCATGGTTTTTGCATCCTGAAATGGataaaaaaaatgg
attttaaatttttagcttgtataaagtaatccaaaaacgcatcgcAAATT
GCAAAATGCGATACGCTAATTTGATTCCTGCAACTCTTGATAAACTTTAG
ACCAAATTTGTTTAGCTTAAataactttttgttgttttgatagTCTGAAA
TGGTGACAACAATATACAATAGTTTTGCGTGCAATATCCTCAATGTTTCA
GTGGAACAAATCACACAGGTAATCCATATTTTGTTATTCAGAAAACTGAA
AACATTCTTTATTAGAGCTTGGTAAAACTTCtgatagaaaattgaaaaaa
actttttattaggGCTTGGCAAAACTTCTGATAGAGGAATAGCAATTAAA
TATATGTTTGTACATCTATCTGTTCATATTTTGTCACTTATTAAGTTTTA
TTACACAGATTGGATAGCTTGTTCAAATTTATTTATAGGTTCCACTCCAC
ATTTTGGAGACCATTTCCAATCCAGATCTTATCACTGAAGAAGCCATTGG
TCCATTGATGTGCATGAAAGCACTGTAAGCTAATTCATGTGTTTTGTTCA
tcttaaaagtattttgtattttgCTTCTACAGTTTTAATAACACAATAGG
TTTAGTTCAACATCTTTCTAGCCACAGAACATCAACGAAATTACCTGCAA
TGcaaatgttctttttttatcACCTATTCCTTTTTGCCTACCAGGGACAT
TTAgaattgatcaaaatttttcttattttaaaattaaaggCCAGAAACTT
TTCAATGATTTGCGATCATCTTTTACTGACCCTGGTTGAAGGGTGGGTTG
ACCCCACTACGTCACTAGTCTTATATATCATGTTTTAATTTATGGttata
ttttatttggaaagctaaatttcaatgctattttgattatactgattttt
attattttagggAATTGTTATTCAGACTTTGTGGAGTAGGTGACTTTTGT
ATGGCAGATCTACGAGAGCCATGTTAGTATAGCTTTTCTTATTTGGAAGA
TACTGTTTTGTTGTTTTAATGCTTAGGTTGTATGGACAAGCTTcataatt
cagtttttttttaatctaaatattttgacttttttactttCAAGCTAAGA
AGAGAACAAGGAAATTACTCAGGTATGAGATgatttaaaaggaaaaattt
atcaaaataatcttTTCCATTCTTTTTCATGCAATACAATTTTTCTCAAT
TATGATATTTAGAAATAGCtaaatatgtattttccaaaaatcaaaatgtt
aaaaacataactaaaagtttcatgcacttacgtacaatcatcagatgtgA
CTAAAAACAgtgttgaaaagaaatttatgtacaagaaaaaaattctgatt
cattaaaaagtgattaaaacatgtgatgggtaattattaaaagatcgtta
aaagataaaaaagacaaaggtagtaaaactgtaaaaTTCTCAAGGGTCTG
GTGGGAcctctttgaagttttttaataaatacttTGCCGCATGGCGACAC
GTAGAAATTAATTCAGATCGtttatttaatagtttttccTTTGACGAAAT
AATGTGGTACTTTTCCGTAAGGCATAGGTCACATGATTTGCTTCCATTTT
TGTACGGTTGGGCGTGGTCGATAACTTTCCACTTCAGAATTGGTTCGATG
TTCTTATTCTGTAGAGACCATACATATTTTGAGAGCTCCGTGGAATTTGA
CTTGTCTTCGTGACGAAAAGTGTGTTTGTGTTGGTACCATCTTGTTTTGA
ACGTGTTTTCCGTCAAACCGATATACTGAGGTGTAAacactttttagaaa
tttagaaatagcATAAAAactgtttcaaaattttgatgaaagaaACCACC
TCATTCTAGCTAAGCAAGGTGGATGCTTGGAAATACTTTTTACTTCATTT
CTTTATAGCCTTCAAGCCTAAAACACAGTGTTGAGGGAAGCAATGTCAAG
CTTGTTTCCTATTATTGGTTTGTTTGAAAtctaaattatcatttttatcc
ttttttagTGCACTTATAAATTTCTACCAATTTTgcgttcaaaatgaaaa
agataaaaatgatgTCCTTAGCAAACTGGTAAGTGTTTTGTTATATATCA
AGGACAATCCATACCTATAATTGTTTTCATAAAGAATCCTCTATATTGTT
GGGCCTATAGTGAGCTCAACCTGGCCCAAATTTTGTCTTCAATACTTTCC
ACCAATGGCATTCTTATTACTTCTCCTTTTCAGTTCTGGCCCTTTTTCAC
CTTTTTCTACATAGGAAACTCTACTACTCTCAACCATGTATGTAAATGTG
AAAGATTGTCATTGTTTACACCTATCATACATACTATCTCACACTTTGAT
GCTGCAAAGTTTGTCTTGAGATTTtgtcaaatattgattttttcattgtt
ttaaaaaatttcttgtgTCCAGGAACACCTATCAAAAGGAATTGAAGTAT
ACACTGATAAAAGAAGAATGCTAAAAGAAAGAATTACACtattaaagtaa
atatttttcttccttttacaTCAAACTGCCTCTTTAAGATAGGTTTTTCA
ATAATAATGGTTCAATCATTAATGTTATAATATTAAGAAATGTTCAACAA
AAATTTCTGTTGTATTTGAAATGCTACTAATAGTAAAATATTCttacctt
ttttattttgaaatattttagggCTGAACGAATGGAAAAACAAAAGGCAG
TACAAGAGGTGATTTATTTATTAATTCAagtattctttttgttatttttg
tctCTGAAGGATACTAATCAAGGTTTCTTTTCTGTCTAGTTATTGAACCG
CTTTTTCAATAAATGAGATCACCTGCGTGATGGCATAATTGACCCCTTCT
TTTCGTGTGCCACAATGATCTTTGATTTCTAAAAGCGTGATGTGTGATTG
ATAGGATGATTATAAAATGTCGAGAGAATATTTTCGGCTTGTTTTTGGCA
TGTTTACAATTACTATTTTTGGTCTGATGTTGtcattaaaattttccact
aggGGCCTTATAAAATTTCACAACCATTGTTTGATTTTAGATGAATCTTA
GTGCTTTGAGAGGAAGACAAGAAGAAGTAGCAGCGTACAAGGTTTCCTTC
TATctacttttattggaatttacAATTAGGTCTAACTAAACTTCTTTTCT
ACTATCATTTCTAATATTATCCATAAGACAAGTTCCAGGTACTATGTTGA
TGTTATTGTaattaatcgcacgatgggttattttttcttatttggcacgc
cctcaaagagaacaattaatcgttaattgcatcctgtagagagcaattaa
tcgttaatcacattCTCCAATGCGgtgccaatgtttacaaaattgatttt
aatgttttttcttacattttttttgcatcgaacgctttaattgcattcga
attttattttgtgagaaaaaaaatcaataaacaacaataaaagaaagaca
taaagacaagagaaaaatataaaactgtcagtgtaatttctgtaatttac
tttcctaactgggaaaaagtagtgaaagccattgtgcgattagctcgtaa
tcacataataactcgtacaattcgaaaattgcactcgtgatttttttgtt
tcgaattttcctcgtcctttcggactcggaaaattaataacaaaaaaacc
actcgtgcaattatattcgaattgcactcgttatcatgtgattacatata
cttatCATATTACTCTAAGCCATGAAATATTTGTGCTGTGTTTAATCCTC
ATCTTGGGTTAGGACCAATTATGAAGGTTATCAGGGACTGCTGATCAACA
AGGTATTCCAACCTAAATATTTATCAGGCTTGGCTTGGCACTTGGCACGT
ATTACAGGATACTGTAATTTGGATTTATTTATAGgaacaaaatatacaaa
aaaacaagaaaattatgCAAGAAACAGATGAACTTCAATGCCTTGTGGTA
AgtgagaaaaaatttgaataaattctaTTATTCTATTTTTGTTGCATGGT
AAGTGAACTGTTCACTCTAtcccattttcatttttcaagtttttattcat
ttcaatTAAAAGTTTGTATAGAAATTGTAGAAATTTAACTGAATCAGCTA
GCTACTATTTGTTTCATTTTACCGATTTACCTTGATTTACCAAtactttt
atttcaaattatagaCCGTCACCAAATCATCACGTCTCATCAAACAAGCT
CAAGAGATTTTAGAAGAACGTATCAGTCGTGAAAATGCACTTAGAATAAA
AGAGAACACTTTTACCAAATTTGGTGATGTATGTATCATTTGAAACGGTC
AAGGAAACACttacttttattttcttattcttattATTTCCAAATCCTTC
GGAATTGGCTAACTAATTGTGTAACTAACAAGTGTGTTTGATTTTCCTTA
GATTGCCCCATCAGCACTAAAAACAGTCCAAAATATCAAAGAAGATTTGA
ACAGATTGTCGTAAGAATCAAACTATCTTCACTTTCTTTCTATTCTAAAT
CTATCAAATAAGTTTAAAATGATTGTCAACAAAAACTATTCTAAATCTAT
TCAAgtaatttacttttactttttgttaCATAACAGACAACTTTCTTCTC
TATCTATTCCTTGAAGGGATTTATTCTaatggacaaaataaaacactCAA
TATCGCTGTGATTGGATAGCAAAATATTGGTGCTTTCACCAGTGCTTGCG
AATGAACAAAATAAAGCCATTCACATATTTTCCCAGATGTAAATTTCAAT
TAATAAATCTAGTTTGAATCAATTCCAAGAGGTCTTCATTCATTCTCAGA
TAGttagcagtggcgttgtggcactCCCCCAGTGGAGCTTTTTtgaacgc
cccaatcttaaaaatcatactttatgcgccttaaatggTGCCCCAAGatc
aattttactgagataattttgaATTACTTGAATTTTTTCGCTCCcaataa
agttaattggtaATTTCTTcgcaatctagctaatttacaagttttttgtg
tacaatatagcattattaaatgaaaatctaactgcgccccaagaccaatt
tgctgacacTTATCCACTAAAtttttccttcctcattatgcctaggcaaa
tgaattagtaaaagtttagaaactggtgggtgggggcgccactttggaaa
attgggggcaacattaaaaaaaatttacattggcCCCTCCTCCTTCCACA
GCGCCACTGACAGTTAGGCTGCagttttaaggcttttttatcGCTCTGGA
AATTTCAAACACAACTTTGAGTACTTAGCAGCTGCCCTTATCTTTTTACC
TTCAGACTGGAATGGTTagtttgttgaaattttgcttttcttttgaaatt
ttcaggatcaatcacaaaagaaaagaagaaataacAGATTTGTCCATGGA
TCTGAAAAGAGAAGCTAAAGATGTTGCGGCTCAAATCGAGGTGAAGGCCT
ATTTTTCTATTAATAACTGTATGTGTGTGTCatcaatcattttcattttc
agaatgtATTCGATTTGTCTGCTTTGGCTGTTAAAATCTGGTTTATACTT
TATTCACATTAgcctttcttttttaaattga Coding sequence (CDS) from alignment at sc0000018_pilon:1274479..1280359+ >XLOC_008423 ID=XLOC_008423|Name=XLOC_008423|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2130bp|location=Sequence derived from alignment at sc0000018_pilon:1274479..1280359+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcatCAAACTATCATCAAATTGCTATCCCAAAGAATATATCTGACGA
TACTATTTTGTATTGTATTGAAACTGTGGCCAATATGAAATTGAGTCCAA
ATGATCTGAAGAATCCTACTatggcatCAAACTATCATCAAATTGCTATC
CCAAAGAATATATCTGACGATACTATTTTGTATTGTATTGAAACTGTGGC
CAATATGAAATTGAGTCCAAATGATCTGAAGAATCCTACTTCTGAAATGG
TGACAACAATATACAATAGTTTTGCGTGCAATATCCTCAATGTTTCAGTG
GAACAAATCACACAGTCTGAAATGGTGACAACAATATACAATAGTTTTGC
GTGCAATATCCTCAATGTTTCAGTGGAACAAATCACACAGGTTCCACTCC
ACATTTTGGAGACCATTTCCAATCCAGATCTTATCACTGAAGAAGCCATT
GGTCCATTGATGTGCATGAAAGCACTGTTCCACTCCACATTTTGGAGACC
ATTTCCAATCCAGATCTTATCACTGAAGAAGCCATTGGTCCATTGATGTG
CATGAAAGCACTggAATTGTTATTCAGACTTTGTGGAGTAGGTGACTTTT
GTATGGCAGATCTACGAGAGCCATggAATTGTTATTCAGACTTTGTGGAG
TAGGTGACTTTTGTATGGCAGATCTACGAGAGCCATCTAAGAAGAGAACA
AGGAAATTACTCAGCTAAGAAGAGAACAAGGAAATTACTCAGTGCACTTA
TAAATTTCTACCAATTTTgcgttcaaaatgaaaaagataaaaatgatgTC
CTTAGCAAACTGTGCACTTATAAATTTCTACCAATTTTgcgttcaaaatg
aaaaagataaaaatgatgTCCTTAGCAAACTGGAACACCTATCAAAAGGA
ATTGAAGTATACACTGATAAAAGAAGAATGCTAAAAGAAAGAATTACACt
attaaaGAACACCTATCAAAAGGAATTGAAGTATACACTGATAAAAGAAG
AATGCTAAAAGAAAGAATTACACtattaaaggCTGAACGAATGGAAAAAC
AAAAGGCAGTACAAGAGggCTGAACGAATGGAAAAACAAAAGGCAGTACA
AGAGATGAATCTTAGTGCTTTGAGAGGAAGACAAGAAGAAGTAGCAGCGT
ACAAGATGAATCTTAGTGCTTTGAGAGGAAGACAAGAAGAAGTAGCAGCG
TACAAGgaacaaaatatacaaaaaaacaagaaaattatgCAAGAAACAGA
TGAACTTCAATGCCTTGTGgaacaaaatatacaaaaaaacaagaaaatta
tgCAAGAAACAGATGAACTTCAATGCCTTGTGaCCGTCACCAAATCATCA
CGTCTCATCAAACAAGCTCAAGAGATTTTAGAAGAACGTATCAGTCGTGA
AAATGCACTTAGAATAAAAGAGAACACTTTTACCAAATTTGGTGATaCCG
TCACCAAATCATCACGTCTCATCAAACAAGCTCAAGAGATTTTAGAAGAA
CGTATCAGTCGTGAAAATGCACTTAGAATAAAAGAGAACACTTTTACCAA
ATTTGGTGATATTGCCCCATCAGCACTAAAAACAGTCCAAAATATCAAAG
AAGATTTGAACAGATTGTCATTGCCCCATCAGCACTAAAAACAGTCCAAA
ATATCAAAGAAGATTTGAACAGATTGTCgatcaatcacaaaagaaaagaa
gaaataacAGATTTGTCCATGGATCTGAAAAGAGAAGCTAAAGATGTTGC
GGCTCAAATCGAGGTGAAGGCCTATTTTTCTATTAATAACTGTATGTGTG
TGTCatcaatcattttcattttcagaatgtATTCGATTTGTCTGCTTTGG
CTGTTAAAATCTGGTTTATACTTTATTCACATTAgcctttcttttttaaa
ttgagatcaatcacaaaagaaaagaagaaataacAGATTTGTCCATGGAT
CTGAAAAGAGAAGCTAAAGATGTTGCGGCTCAAATCGAGGTGAAGGCCTA
TTTTTCTATTAATAACTGTATGTGTGTGTCatcaatcattttcattttca
gaatgtATTCGATTTGTCTGCTTTGGCTGTTAAAATCTGGTTTATACTTT
ATTCACATTAgcctttcttttttaaattga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:1274479..1280359 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 841-1065:5657 |
| Aaloc | 781-837:4702 |
| Aaloc | 667-780:4465 |
| Aaloc | 604-666:4185 |
| Aaloc | 553-603:3341 |
| Aaloc | 517-552:2973 |
| Aaloc | 442-513:2723 |
| Aaloc | 373-441:2310 |
| Aaloc | 346-369:1397 |
| Aaloc | 283-342:1212 |
| Aaloc | 196-279:739 |
| Aaloc | 121-195:444 |
| Aaloc | 1-120:1 |
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