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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:2069526..2072866+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005296 ID=XLOC_005296|Name=XLOC_005296|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3341bp|location=Sequence derived from alignment at sc0000018_pilon:2069526..2072866+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGATATTCCCGATGCAAAAGAACAATATATGAGACTCAACAATGA
AATCAAACCGAGatttgagaaattgaaaaatatagatCTATTCGTCATCG
ATAACTCTATCCGTGAGTCCACTGTGCTCTTCGTGGACACACACTGGAAA
ATAAATACAGCATTTTGAATGAGGTGAGGGAAACTTCAGTAAGAGTTGAA
TAAAAGTCGTCGAAAAGCAGGAGTTTTCAGAATCATTGTGGTCCATTTTT
TGGGCTTGTTTTACaatttctatcaaaaataTCGGAAAGAAAAGCGTGCC
TGGTCTATATTTTTTGTGACTAAGTGTGTGTGGTTACCGTTTACTTTGAT
CATCCGCTTATGATGCTATTGAATTGTATGTAAATAAACTTTTTAGATTT
CCTAAAAGCCTCAAGAACTATATAAATTTGATCAAAAcctattttctttc
ctttcaatcATCCATTCGGATTAAAGCTATTTAAGAAACAAATTTGAATC
TATATATTTTATACTACAGACAAAGGAGCTTGGTTTCCAGCATAACATCG
TTGGAGCATTTTCACACTTGCGTAGAGTCGACGATGAATTTATCACGCAT
CTCATCAAGAGTGGGGAAGATATGACCAACAAGTATGCCTTCTCCGAATT
TTATGACAGTTGTGACAAGAAAACACATTTACCTGTTCCCGGTATCCCGA
TCGGATTACAAAAATGTAAAGAGCTTGGTGTCCCCAATGTGATTATGGAG
GTTGACTTGGCAAATCTAGCACCTGAAAGTCAATTCACCCATGAGAAGAG
ATGCCAACTCTTCCTAGAAAGATTCCAATGGATTCGTGAGAATCTAAAGT
CCCCAGGTAGGATTTTAATCAATTTACGTGATCTCCCAGCTGCCATCATT
AATCCAAAACTCCTTGATCTAGTCTTGGAGACAGTTGATTTCCTATCTCG
ACATCGTCCTCAAATATTTGCTATCCTTACTGAGGAACCGACTGGTCAAT
ACTTTCCTGAACAACTACGAAACATGACCAAGACAGTCACCGATCTGATG
AAAGGAAATGGATACACCGGTCATTTCTTGGTCCACATTCATCAGCAATG
GGGTCTACACAATGCTGGTAACTTAGAATGTCTTGCAAATGGTGCTACAG
GGATTTGGTGCTCTGTATCCGAGGAAGGAGCCGCTCTTGGACATGCTTCG
TCAGCATTAACAATTATGAATCTCATTCGACTTGGAAACACCAAAGTTCA
AGAGCGTTATAACTGCAAATATATAAGAAAAGCTGCTCAGAATATCACCC
AGGTATTTATAAAATCTTCCTTTTGACATCCCTGTATGAATACTTTTTTG
TCAGAATTTTCTCTCATTGTTAAAACAATTACATGGTAATTATAACTGAA
CGAAAAGTACTTCGGGTATTAGAAACGATTCACTTATTTTCATAAGCCAA
AGCCATTTACTTCTCAAACGATGGGAAAAAATTGTCAACAACAGAGGCAA
ACAGCCATTCTATTTCCGattttaaaacttcaaattcaatcttttcaaGA
AGACATATAGTACAGTCACTGACAATGAGAATCACCCCTCTTTTTTCAGG
TTGTATCGGGCAAACCCGCCCATCCAAAAACACCAGTTTATGGTGCTAGA
GCTGTTGATCAAGTCTTTGGTCTCAGTGGAATGGGCGGTAATGTGGGCGG
ATTTGGTAATATGGACCTTGCCGAGTTTTTCGATATCACCAAAACAATGC
GAATTACCACACTTGCATCAAATGATATGATTGTTACCAGGTTTGTAATC
ATTCTTTTCACTTTGTTAAAAGTCTCTCGCAAATGACTCTAAAGATGATG
Agcaaaatcatattttttaataattcttttgtacattttcgttttcaaac
CACCCACcctaaaaaatgcaaaaatttaaaGTTGAATTAAACGAAAACGA
TTGATACCATCGGACAGAGGCATGAATATCTGGGCAAGAGAAGTACTATT
ATAAGGTTTGCCCCCCATCAGTATGTACAACTATGTTTGAAAAGTATATA
CTGAGGTATTCTCAAAACCAGCTTTTACTACCACGACCATACTTAGAGTT
TCAGATGCCGGAGAAAATATAATCATTGTAAATattattctttcatttta
caCAATAGATTGACCCGTTTGTTTGGCGAGGATCCTAATTTCACTGAAGC
AAGAGCGGAGCTGATGAAACAGCAAATGTTGGATGATTACAAGAACAACA
AGAAAGAGGAATACCACAGTCCTATTGGATTAATCACATTGTTTGATAAA
GCTGGAGGTAAAAAGACTCCAGCAATGTTGAAAGCACTTCAAgaggtttg
tttatttttactaTTCGTCAATTCTTTACACACTTTATAGAATTGACTTC
GttttaatacacccctgtgtcacaagaCTCGAGACTGGGACTCCAGCCGC
ACTGGAAAaaagactttgatttcatccccattcgaaattcaatgtttata
aATTGTACTCtgaaaccatccccactggatttttaaccttggaacaatag
aatattATCCCCACTAGGGGTGTATTAATTGAGTCATTGAGGCACGACat
aaaaaacttttcataaattacatcacgtGCAatgcttacctcgttttcaa
aatgttaCTATGGTAATTGTTTCTCAGATGAGTCCGAAGAAGTTTATTta
atatacaaaaataacaCCTTAACTCTCGAAAgttttaatcaccttggtaa
tggtgACAAATAAAGGTAGTCGTTGAACTCAAaatgatttatgaaaaggc
ctattctttaaagggacataaaagtactttcgaaatttgtaaacaaaccg
tatgcaacAACAACCATATATGACAAGACAAAACACGTCGTCGTTGTAAC
ATAATCAGACACCAAGTGCAATTCCtactaaaaaatctttttaatttcta
GTATGAAGTCCAATCGTTGCATATCCAAGAGCTGATCGAAGAGATTCACG
ACCTTTGGAAGTTGTGGGATTCTTCAGACGGCAATTTAGATGGAAACATC
ACATTCGATAATTTCTATAACGCCTTCATGAACGAATACTTCGGTTGTTA
CAGATGTACGCAAACTCAACAAGCACTTCAAGCTATTAATGTTGTTGATG
ATGATGTCATCTCTTGGGATGAGTTTTCCATCTTTTTGAAATGGGCTGGT
AAAGAATATCCGCAAGTTGAAGACGCAGAAGCTTTACTGGAGAAAGCTTT
CTTGGAAGGTATTGTACCAGCAATGCAAGATGAAGTTATCAAGAGTGCCA
AATCTGGCAAAAGTCTTTTCCACGATCCACATAATTTCTAA Coding sequence (CDS) from alignment at sc0000018_pilon:2069526..2072866+ >XLOC_005296 ID=XLOC_005296|Name=XLOC_005296|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3448bp|location=Sequence derived from alignment at sc0000018_pilon:2069526..2072866+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGATATTCCCGATGCAAAAGAACAATATATGAGACTCAACAATGA
AATCAAACCGAGatttgagaaattgaaaaatatagatCTATTCGTCATCG
ATAACTCTATCCGTGAGTCCACTGTGCTCTTCGTGGACACACACTGGAAA
ATAAATACAGCATTTTGAATGAGATGGCAGATATTCCCGATGCAAAAGAA
CAATATATGAGACTCAACAATGAAATCAAACCGAGatttgagaaattgaa
aaatatagatCTATTCGTCATCGATAACTCTATCCGTGAGTCCACTGTGC
TCTTCGTGGACACACACTGGAAAATAAATACAGCATTTTGAATGAGACAA
AGGAGCTTGGTTTCCAGCATAACATCGTTGGAGCATTTTCACACTTGCGT
AGAGTCGACGATGAATTTATCACGCATCTCATCAAGAGTGGGGAAGATAT
GACCAACAAGTATGCCTTCTCCGAATTTTATGACAGTTGTGACAAGAAAA
CACATTTACCTGTTCCCGGTATCCCGATCGGATTACAAAAATGTAAAGAG
CTTGGTGTCCCCAATGTGATTATGGAGGTTGACTTGGCAAATCTAGCACC
TGAAAGTCAATTCACCCATGAGAAGAGATGCCAACTCTTCCTAGAAAGAT
TCCAATGGATTCGTGAGAATCTAAAGTCCCCAGGTAGGATTTTAATCAAT
TTACGTGATCTCCCAGCTGCCATCATTAATCCAAAACTCCTTGATCTAGT
CTTGGAGACAGTTGATTTCCTATCTCGACATCGTCCTCAAATATTTGCTA
TCCTTACTGAGGAACCGACTGGTCAATACTTTCCTGAACAACTACGAAAC
ATGACCAAGACAGTCACCGATCTGATGAAAGGAAATGGATACACCGGTCA
TTTCTTGGTCCACATTCATCAGCAATGGGGTCTACACAATGCTGGTAACT
TAGAATGTCTTGCAAATGGTGCTACAGGGATTTGGTGCTCTGTATCCGAG
GAAGGAGCCGCTCTTGGACATGCTTCGTCAGCATTAACAATTATGAATCT
CATTCGACTTGGAAACACCAAAGTTCAAGAGCGTTATAACTGCAAATATA
TAAGAAAAGCTGCTCAGAATATCACCCAGACAAAGGAGCTTGGTTTCCAG
CATAACATCGTTGGAGCATTTTCACACTTGCGTAGAGTCGACGATGAATT
TATCACGCATCTCATCAAGAGTGGGGAAGATATGACCAACAAGTATGCCT
TCTCCGAATTTTATGACAGTTGTGACAAGAAAACACATTTACCTGTTCCC
GGTATCCCGATCGGATTACAAAAATGTAAAGAGCTTGGTGTCCCCAATGT
GATTATGGAGGTTGACTTGGCAAATCTAGCACCTGAAAGTCAATTCACCC
ATGAGAAGAGATGCCAACTCTTCCTAGAAAGATTCCAATGGATTCGTGAG
AATCTAAAGTCCCCAGGTAGGATTTTAATCAATTTACGTGATCTCCCAGC
TGCCATCATTAATCCAAAACTCCTTGATCTAGTCTTGGAGACAGTTGATT
TCCTATCTCGACATCGTCCTCAAATATTTGCTATCCTTACTGAGGAACCG
ACTGGTCAATACTTTCCTGAACAACTACGAAACATGACCAAGACAGTCAC
CGATCTGATGAAAGGAAATGGATACACCGGTCATTTCTTGGTCCACATTC
ATCAGCAATGGGGTCTACACAATGCTGGTAACTTAGAATGTCTTGCAAAT
GGTGCTACAGGGATTTGGTGCTCTGTATCCGAGGAAGGAGCCGCTCTTGG
ACATGCTTCGTCAGCATTAACAATTATGAATCTCATTCGACTTGGAAACA
CCAAAGTTCAAGAGCGTTATAACTGCAAATATATAAGAAAAGCTGCTCAG
AATATCACCCAGGTTGTATCGGGCAAACCCGCCCATCCAAAAACACCAGT
TTATGGTGCTAGAGCTGTTGATCAAGTCTTTGGTCTCAGTGGAATGGGCG
GTAATGTGGGCGGATTTGGTAATATGGACCTTGCCGAGTTTTTCGATATC
ACCAAAACAATGCGAATTACCACACTTGCATCAAATGATATGATTGTTAC
CAGGTTGTATCGGGCAAACCCGCCCATCCAAAAACACCAGTTTATGGTGC
TAGAGCTGTTGATCAAGTCTTTGGTCTCAGTGGAATGGGCGGTAATGTGG
GCGGATTTGGTAATATGGACCTTGCCGAGTTTTTCGATATCACCAAAACA
ATGCGAATTACCACACTTGCATCAAATGATATGATTGTTACCAGATTGAC
CCGTTTGTTTGGCGAGGATCCTAATTTCACTGAAGCAAGAGCGGAGCTGA
TGAAACAGCAAATGTTGGATGATTACAAGAACAACAAGAAAGAGGAATAC
CACAGTCCTATTGGATTAATCACATTGTTTGATAAAGCTGGAGGTAAAAA
GACTCCAGCAATGTTGAAAGCACTTCAAgagATTGACCCGTTTGTTTGGC
GAGGATCCTAATTTCACTGAAGCAAGAGCGGAGCTGATGAAACAGCAAAT
GTTGGATGATTACAAGAACAACAAGAAAGAGGAATACCACAGTCCTATTG
GATTAATCACATTGTTTGATAAAGCTGGAGGTAAAAAGACTCCAGCAATG
TTGAAAGCACTTCAAgagTATGAAGTCCAATCGTTGCATATCCAAGAGCT
GATCGAAGAGATTCACGACCTTTGGAAGTTGTGGGATTCTTCAGACGGCA
ATTTAGATGGAAACATCACATTCGATAATTTCTATAACGCCTTCATGAAC
GAATACTTCGGTTGTTACAGATGTACGCAAACTCAACAAGCACTTCAAGC
TATTAATGTTGTTGATGATGATGTCATCTCTTGGGATGAGTTTTCCATCT
TTTTGAAATGGGCTGGTAAAGAATATCCGCAAGTTGAAGACGCAGAAGCT
TTACTGGAGAAAGCTTTCTTGGAAGGTATTGTACCAGCAATGCAAGATGA
AGTTATCAAGAGTGCCAAATCTGGCAAAAGTCTTTTCCACGATCCACATA
ATTTCTAATATGAAGTCCAATCGTTGCATATCCAAGAGCTGATCGAAGAG
ATTCACGACCTTTGGAAGTTGTGGGATTCTTCAGACGGCAATTTAGATGG
AAACATCACATTCGATAATTTCTATAACGCCTTCATGAACGAATACTTCG
GTTGTTACAGATGTACGCAAACTCAACAAGCACTTCAAGCTATTAATGTT
GTTGATGATGATGTCATCTCTTGGGATGAGTTTTCCATCTTTTTGAAATG
GGCTGGTAAAGAATATCCGCAAGTTGAAGACGCAGAAGCTTTACTGGAGA
AAGCTTTCTTGGAAGGTATTGTACCAGCAATGCAAGATGAAGTTATCAAG
AGTGCCAAATCTGGCAAAAGTCTTTTCCACGATCCACATAATTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:2069526..2072866 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1339-1728:2952 |
| Aaloc | 1153-1338:2160 |
| Aaloc | 961-1149:1600 |
| Aaloc | 178-960:520 |
| Aaloc | 136-177:132 |
| Aaloc | 133-135:127 |
| Aaloc | 1-126:1 |
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