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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95607_evm1 >transcript:BL95607_evm1-protein ID=transcript:BL95607_evm1-protein|Name=transcript:BL95607_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=434bp
MRKDPFVAFLGLLAFGGVALLASFSDVAFTNSTLQTLTWGRRLDVSVQVD
PLGRENQDGDSQNASVESNQQSSKDCIPKKHFVWIKVHKAGSQTTTPLFE
RFAFNNHLKVLLGVHNGPSISWPLPPKEGKYVQMKEGEPFDALYSHSRYN
KTWMEAHFPDDTAYLAIVKQPFTHFKSCFHYYDVSRKVGIKSKDKSPLKK
FLEDPWKYKTEAMSQGIRWDKTRNAQLFDLGFPMEKSDDMEWTEKYIAQL
DRDFLLVIILEYHDESLILLKRLMCWTLFDILLGSANRNSRSYGYKYYKP
TPDEEATYRKYAAAEYAMYKRFNQSLWEKISQQSPDFFQEVDHYRNVTTQ
VREFCKGGMGKILVIAGTPWNSEYRLPRGFCTDLKTTDPRWRSKSWRQLG
YPPRRPPGELFNARVYLSKFLHAARNDSTENEPR Run BLAST on NCBI mRNA from alignment at Sc0000072:902367..904205+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95607_evm1 ID=transcript:BL95607_evm1|Name=transcript:BL95607_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1839bp|location=Sequence derived from alignment at Sc0000072:902367..904205+ (Branchiostoma lanceolatum)
ATGAGAAAAGACCCATTCGTTGCCTTTCTGGGCCTTCTCGCCTTTGGTGG
CGTCGCTCTATTGGCCTCTTTCTCGGACGTAGCGTTCACTAATAGTACTT
TACAAACTCTAACGTGGGGGAGGAGATTAGATGTGTCAGTACAGGTAGAC
CCTCTGGGACGTGAAAATCAAGATGGAGACAGCCAAAATGCGTCGGTCGA
GAGTAACCAGCAGTCCTCCAAGGACTGTATCCCCAAGAAGCATTTCGTCT
GGATCAAAGTTCACAAGGCTGGCTCTCAAACCACCACGCCATTGTTCGAG
AGATTTGCCTTCAACAACCATCTCAAGGTCAGTGAGGGTCATGCAACTTA
AGTGGATAGTACTGTATGAATAAAACTTGAAAACAATGTCATTGTACAAT
TATCATGATACTACATGTTCTTTTATCAGGTGTGATAGAGGGGAAGTACT
GGTAGGTAAAGTACTAGAAAGTACCAGATTACCCAATTGTACTTGTAAAG
TGCTAGAGTACCCGATTGCACTTGTCCACTCTCAGTGCACACTATAATTC
AGCGCTAATGTTCTCTCTGACTTATCATCTTCTATGACTATGCCCCAGGT
GCTACTTGGTGTTCACAATGGCCCGTCCATCAGCTGGCCACTACCGCCCA
AGGAAGGCAAGTATGTCCAGATGAAGGAGGGAGAGCCGTTCGACGCCCTG
TACTCACACAGGTACGTCACGTCAAGTTCAGTCAGCTGGGGTTTCTACTA
CAGCATTTCCAACTAACCATTTTGTCAAAGTTGAAGCTAGTTTGTGAAAA
GATGACGATAGTGTCGTAGTAATTTTAATCACAGTTTAATTAACATTTGA
ATACAATATGATCCTAAAGACAAGTAGATTGTTAAATTGCATTGTTTGTG
TCTATACAACAACATTGGTAACTTTTGTTGCTGTTGTTGTTTTTGTTGAT
AATATTATTTTCCAATCTACATAGTCGTTACAATAAGACATGGATGGAGG
CCCATTTCCCCGACGACACGGCGTACCTGGCTATTGTTAAACAACCATTC
ACACACTTCAAGAGCTGTTTCCACTACTACGATGTTTCCAGAAAAGTTGG
CATCAAGTCTAAGGACAAGAGTCCGTTAAAAAAGTTTCTGGAGGATCCTT
GGAAATACAAGACGGAGGCAATGTCTCAAGGGATCCGATGGGACAAAACC
AGAAATGCACAACTCTTTGACTTGGGCTTCCCCATGGAGAAGTCTGATGA
CATGGAATGGACGGAGAAATACATCGCTCAGTTGGACCGGGACTTCTTAC
TTGTCATCATATTAGAATATCATGACGAGTCCCTCATATTGTTGAAAAGG
CTAATGTGTTGGACATTGTTCGATATTCTTTTAGGATCAGCAAATAGGAA
CAGTCGCAGTTACGGCTACAAGTACTACAAACCCACACCGGATGAGGAGG
CGACCTACAGAAAATACGCGGCGGCAGAATACGCCATGTACAAACGGTTC
AACCAATCGCTGTGGGAGAAAATCTCACAACAGAGCCCGGACTTCTTTCA
GGAGGTGGACCATTATAGAAACGTCACCACTCAAGTTCGTGAATTCTGCA
AAGGAGGAATGGGTAAAATATTGGTCATTGCAGGCACACCGTGGAACAGC
GAGTACAGACTGCCCCGTGGTTTCTGTACAGATCTGAAGACAACCGACCC
AAGATGGAGGAGTAAGTCATGGCGCCAGCTGGGATACCCGCCGCGCAGGC
CACCGGGGGAACTCTTCAACGCCAGAGTCTATCTCAGCAAGTTTCTACAC
GCAGCGAGAAATGACTCTACAGAGAATGAGCCCCGGTGA Coding sequence (CDS) from alignment at Sc0000072:902367..904205+ >transcript:BL95607_evm1 ID=transcript:BL95607_evm1|Name=transcript:BL95607_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3915bp|location=Sequence derived from alignment at Sc0000072:902367..904205+ (Branchiostoma lanceolatum)
ATGAGAAAAGACCCATTCGTTGCCTTTCTGGGCCTTCTCGCCTTTGGTGG
CGTCGCTCTATTGGCCTCTTTCTCGGACGTAGCGTTCACTAATAGTACTT
TACAAACTCTAACGTGGGGGAGGAGATTAGATGTGTCAGTACAGGTAGAC
CCTCTGGGACGTGAAAATCAAGATGGAGACAGCCAAAATGCGTCGGTCGA
GAGTAACCAGCAGTCCTCCAAGGACTGTATCCCCAAGAAGCATTTCGTCT
GGATCAAAGTTCACAAGGCTGGCTCTCAAACCACCACGCCATTGTTCGAG
AGATTTGCCTTCAACAACCATCTCAAGGTGCTACTTGGTGTTCACAATGG
CCCGTCCATCAGCTGGCCACTACCGCCCAAGGAAGGCAAGTATGTCCAGA
TGAAGGAGGGAGAGCCGTTCGACGCCCTGTACTCACACAGTCGTTACAAT
AAGACATGGATGGAGGCCCATTTCCCCGACGACACGGCGTACCTGGCTAT
TGTTAAACAACCATTCACACACTTCAAGAGCTGTTTCCACTACTACGATG
TTTCCAGAAAAGTTGGCATCAAGTCTAAGGACAAGAGTCCGTTAAAAAAG
TTTCTGGAGGATCCTTGGAAATACAAGACGGAGGCAATGTCTCAAGGGAT
CCGATGGGACAAAACCAGAAATGCACAACTCTTTGACTTGGGCTTCCCCA
TGGAGAAGTCTGATGACATGGAATGGACGGAGAAATACATCGCTCAGTTG
GACCGGGACTTCTTACTTGTCATCATATTAGAATATCATGACGAGTCCCT
CATATTGTTGAAAAGGCTAATGTGTTGGACATTGTTCGATATTCTTTTAG
GATCAGCAAATAGGAACAGTCGCAGTTACGGCTACAAGTACTACAAACCC
ACACCGGATGAGGAGGCGACCTACAGAAAATACGCGGCGGCAGAATACGC
CATGTACAAACGGTTCAACCAATCGCTGTGGGAGAAAATCTCACAACAGA
GCCCGGACTTCTTTCAGGAGGTGGACCATTATAGAAACGTCACCACTCAA
GTTCGTGAATTCTGCAAAGGAGGAATGGGTAAAATATTGGTCATTGCAGG
CACACCGTGGAACAGCGAGTACAGACTGCCCCGTGGTTTCTGTACAGATC
TGAAGACAACCGACCCAAGATGGAGGAGTAAGTCATGGCGCCAGCTGGGA
TACCCGCCGCGCAGGCCACCGGGGGAACTCTTCAACGCCAGAGTCTATCT
CAGCAAGTTTCTACACGCAGCGAGAAATGACTCTACAGAGAATGAGCCCC
GGTGAATGAGAAAAGACCCATTCGTTGCCTTTCTGGGCCTTCTCGCCTTT
GGTGGCGTCGCTCTATTGGCCTCTTTCTCGGACGTAGCGTTCACTAATAG
TACTTTACAAACTCTAACGTGGGGGAGGAGATTAGATGTGTCAGTACAGG
TAGACCCTCTGGGACGTGAAAATCAAGATGGAGACAGCCAAAATGCGTCG
GTCGAGAGTAACCAGCAGTCCTCCAAGGACTGTATCCCCAAGAAGCATTT
CGTCTGGATCAAAGTTCACAAGGCTGGCTCTCAAACCACCACGCCATTGT
TCGAGAGATTTGCCTTCAACAACCATCTCAAGGTGCTACTTGGTGTTCAC
AATGGCCCGTCCATCAGCTGGCCACTACCGCCCAAGGAAGGCAAGTATGT
CCAGATGAAGGAGGGAGAGCCGTTCGACGCCCTGTACTCACACAGTCGTT
ACAATAAGACATGGATGGAGGCCCATTTCCCCGACGACACGGCGTACCTG
GCTATTGTTAAACAACCATTCACACACTTCAAGAGCTGTTTCCACTACTA
CGATGTTTCCAGAAAAGTTGGCATCAAGTCTAAGGACAAGAGTCCGTTAA
AAAAGTTTCTGGAGGATCCTTGGAAATACAAGACGGAGGCAATGTCTCAA
GGGATCCGATGGGACAAAACCAGAAATGCACAACTCTTTGACTTGGGCTT
CCCCATGGAGAAGTCTGATGACATGGAATGGACGGAGAAATACATCGCTC
AGTTGGACCGGGACTTCTTACTTGTCATCATATTAGAATATCATGACGAG
TCCCTCATATTGTTGAAAAGGCTAATGTGTTGGACATTGTTCGATATTCT
TTTAGGATCAGCAAATAGGAACAGTCGCAGTTACGGCTACAAGTACTACA
AACCCACACCGGATGAGGAGGCGACCTACAGAAAATACGCGGCGGCAGAA
TACGCCATGTACAAACGGTTCAACCAATCGCTGTGGGAGAAAATCTCACA
ACAGAGCCCGGACTTCTTTCAGGAGGTGGACCATTATAGAAACGTCACCA
CTCAAGTTCGTGAATTCTGCAAAGGAGGAATGGGTAAAATATTGGTCATT
GCAGGCACACCGTGGAACAGCGAGTACAGACTGCCCCGTGGTTTCTGTAC
AGATCTGAAGACAACCGACCCAAGATGGAGGAGTAAGTCATGGCGCCAGC
TGGGATACCCGCCGCGCAGGCCACCGGGGGAACTCTTCAACGCCAGAGTC
TATCTCAGCAAGTTTCTACACGCAGCGAGAAATGACTCTACAGAGAATGA
GCCCCGGTGAATGAGAAAAGACCCATTCGTTGCCTTTCTGGGCCTTCTCG
CCTTTGGTGGCGTCGCTCTATTGGCCTCTTTCTCGGACGTAGCGTTCACT
AATAGTACTTTACAAACTCTAACGTGGGGGAGGAGATTAGATGTGTCAGT
ACAGGTAGACCCTCTGGGACGTGAAAATCAAGATGGAGACAGCCAAAATG
CGTCGGTCGAGAGTAACCAGCAGTCCTCCAAGGACTGTATCCCCAAGAAG
CATTTCGTCTGGATCAAAGTTCACAAGGCTGGCTCTCAAACCACCACGCC
ATTGTTCGAGAGATTTGCCTTCAACAACCATCTCAAGGTGCTACTTGGTG
TTCACAATGGCCCGTCCATCAGCTGGCCACTACCGCCCAAGGAAGGCAAG
TATGTCCAGATGAAGGAGGGAGAGCCGTTCGACGCCCTGTACTCACACAG
TCGTTACAATAAGACATGGATGGAGGCCCATTTCCCCGACGACACGGCGT
ACCTGGCTATTGTTAAACAACCATTCACACACTTCAAGAGCTGTTTCCAC
TACTACGATGTTTCCAGAAAAGTTGGCATCAAGTCTAAGGACAAGAGTCC
GTTAAAAAAGTTTCTGGAGGATCCTTGGAAATACAAGACGGAGGCAATGT
CTCAAGGGATCCGATGGGACAAAACCAGAAATGCACAACTCTTTGACTTG
GGCTTCCCCATGGAGAAGTCTGATGACATGGAATGGACGGAGAAATACAT
CGCTCAGTTGGACCGGGACTTCTTACTTGTCATCATATTAGAATATCATG
ACGAGTCCCTCATATTGTTGAAAAGGCTAATGTGTTGGACATTGTTCGAT
ATTCTTTTAGGATCAGCAAATAGGAACAGTCGCAGTTACGGCTACAAGTA
CTACAAACCCACACCGGATGAGGAGGCGACCTACAGAAAATACGCGGCGG
CAGAATACGCCATGTACAAACGGTTCAACCAATCGCTGTGGGAGAAAATC
TCACAACAGAGCCCGGACTTCTTTCAGGAGGTGGACCATTATAGAAACGT
CACCACTCAAGTTCGTGAATTCTGCAAAGGAGGAATGGGTAAAATATTGG
TCATTGCAGGCACACCGTGGAACAGCGAGTACAGACTGCCCCGTGGTTTC
TGTACAGATCTGAAGACAACCGACCCAAGATGGAGGAGTAAGTCATGGCG
CCAGCTGGGATACCCGCCGCGCAGGCCACCGGGGGAACTCTTCAACGCCA
GAGTCTATCTCAGCAAGTTTCTACACGCAGCGAGAAATGACTCTACAGAG
AATGAGCCCCGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000072 | genome | Sc0000072:902367..904205 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95607_evm1 |
| Biotype | protein_coding |
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