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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86140_cuf0 >transcript:BL86140_cuf0-protein ID=transcript:BL86140_cuf0-protein|Name=transcript:BL86140_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=408bp
MHSTAELCVGHSGKESDISETQTTDMSLQQKTCHVNFPQPDNRPTSQVQQ
SKGDMGRDVVKNSGEKPFVCKECGYSAAKKSRLSDHMRTHTGEKPYKCDQ
CDYSAARKSTLDVHCTKHTGEKPYMCKECEYRTAKKSHLSEHMRTHTGEK
PYKCDQCDYSATKKCHLASHLTTNHTHNYERPYRCWECGHRTAKKCHLSE
HMRTHTGEKPYKCDQCDYSAARKSHLDQHLRKHTGEKPYICWECGYRTSE
KSNLTRHMRNHSSEKSYKRDQCDYSAAQKSTIDRHLAKHTGEKPYMCGEC
GYRTTQKYYLSRHRKVHTGEKPYKCGQCDYSAARKSHLEQHEAKHTGEKP
YKCGECGYRTAQKSHLSDHMTTHTGVKRHQCNQCELSTTKKSTLDKHIAK
HHDYAAGN Run BLAST on NCBI mRNA from alignment at Sc0000000:1066914..1069937+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86140_cuf0 ID=transcript:BL86140_cuf0|Name=transcript:BL86140_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3024bp|location=Sequence derived from alignment at Sc0000000:1066914..1069937+ (Branchiostoma lanceolatum)
CTGACGTCCGCCATTTTGATTTTGCGTCATAGTCATCGTAATCACCTCCT
CAGAACTGACGCGATTTTTACGGAATTCCAGAGATCGCGGAGACCGCTAA
CCACCATAAACATACAGGTAAGACCTTAAGTTGTCTTTTATGCTTCTTCG
TTTGTGCTTAAATTAGAACTACAGTGTGCTTGTGGTCGGTAGTTGATGGG
GAGGGGGGCATTTGATGTAACAGCTGCCTTGTCGATTTGTGTCATTAGAA
ATGGTGCAGAAATAATGAACTATGTTGTTGTATCCTCTGAAAAATATTGC
AAACTTGTTACTGAAAAAGGAGTTGATTTCTCAGGCTTAAATTGGTCCAC
TATTTCAAATAGTAATTCGACGAATTTCTGATGTAAAATCCGACTCCCGT
GTCCTTTTCTGATTTCTTAAAGAAGTAAATATAGTTATATTTCCCTTTTC
TATATGTTCTTTCCATCATTTTAGGGATGGCGAAGTTAACATGTGGAACA
AACTGCGAACGAGACGCACATCAAGGAGGAGACGGGAGACACTGGATGGC
AACAGGGTGAACAAGAGAACGTTGGTGAGGACCAGGAAACCTACGACTAC
TTCGGTACAACCCAACCAACCGGACATCCGTGTAACGAGACTTACAACAG
TTGGGAGCAGACAACAGACACGGGACGACAGCGGGACGAGGAAAAGGGCG
TTCCAATTGACGGAACTTGCGGTGTAAAAACAGAAGTAGGATATCCCAGC
TGCATGCATTCTACTGCAGAACTGTGTGTCGGACATTCTGGGAAGGAGAG
TGATATCAGTGAGACCCAGACAACAGACATGAGCCTGCAGCAGAAAACGT
GTCATGTGAACTTTCCCCAACCCGACAACAGGCCAACCTCACAGGTACAG
CAGAGCAAAGGCGATATGGGAAGAGATGTAGTTAAAAACAGTGGTGAGAA
ACCCTTCGTGTGTAAGGAGTGCGGGTACAGTGCGGCTAAAAAGTCCCGCC
TATCCGATCATATGAGAACCCATACAGGAGAAAAACCTTACAAATGTGAC
CAGTGCGACTATTCCGCTGCACGAAAATCCACATTAGATGTACACTGTAC
AAAACACACAGGTGAGAAACCCTACATGTGTAAGGAGTGTGAGTACAGGA
CGGCTAAAAAGTCCCACCTATCCGAGCATATGAGAACCCATACAGGAGAA
AAACCCTACAAATGTGATCAGTGTGACTATTCTGCCACTAAAAAATGCCA
CTTAGCTAGCCATCTTACAACAAATCACACCCACAATTATGAGAGACCCT
ACAGGTGTTGGGAGTGTGGGCACAGAACGGCTAAGAAGTGTCACCTATCC
GAGCATATGAGAACCCATACAGGAGAAAAACCTTACAAGTGCGACCAGTG
CGACTATTCTGCAGCACGCAAATCCCATTTGGACCAACATCTTAGAAAGC
ATACTGGTGAGAAACCCTACATTTGTTGGGAATGTGGGTACAGGACGAGT
GAAAAATCTAACTTGACTCGACATATGAGAAACCACTCAAGTGAAAAATC
CTACAAGCGTGACCAGTGCGACTATTCCGCAGCACAGAAGTCCACTATTG
ACCGACATCTAGCAAAACACACCGGTGAGAAGCCCTACATGTGTGGAGAG
TGTGGGTACAGAACAACTCAAAAGTACTATTTGTCCCGACACAGGAAAGT
CCATACGGGTGAAAAACCTTACAAGTGTGGCCAGTGTGACTATTCTGCGG
CACGGAAATCTCATTTGGAACAACATGAAGCAAAACACACGGGTGAGAAA
CCCTACAAGTGTGGAGAGTGTGGGTACAGAACGGCTCAAAAGTCTCACCT
GTCCGACCATATGACAACCCATACAGGTGTAAAGCGTCACCAGTGTAACC
AGTGTGAATTATCTACCACAAAGAAATCTACTTTAGACAAACATATAGCA
AAACACCACGACTATGCAGCAGGAAATTAAACGCTCACCTATCTAAATAT
GTGAGAAAACATTCCAAAAGCAAACCCGTCACATCTGGGACCAAACTGAC
TACGGTATTCTGTACAGTAGCTTTAGGTGCTGTGTCTATGTACCACAGTT
AAAAACAAAGCCACTCTTCTGTTTGAGGGGACTTAACACAATGTTGTACA
GACAGATTCCATATCGCATGAATGTTAACATGTTGTGCATTTCTGAATGT
GTTGTTGTTGTTTACCTTGAATGGTGGATGTGTTCCATAGAATAATGTAC
AAGATGAGCTTTGATTGTATGTAATAACGGAGAGTCTCTTGAAAGTGTCG
ATAGAAAGTGAAGACAGACTTCCGTTGTTGTGGCTGATGGGAAAGATCTT
AATGCCACATGACAAGACATATTTTAAGTCATACTTCTGTATCATGTACC
ATCTGTGGGAGGAAGTACAGAGGAAAACACCAGATGAAAAGACATATAAA
AAATAGCCACTAACCAAAAATATAACAGGAAGACCCTTTTTTCAAATACA
TTCTGGGTAGTTTTACAGTCATCCTTTTCACTACTTAAGATTGCATGCTG
TTTCCTATATTTTGCATTGCAAAACAGCATATAAAATGGCGAAAACTTAA
TGGTTCAGTTTACAACTGCATTAGCATAATTAGGTAATTATGGAGCAAAA
GTGCATTATTTTGACCCTACTACCACTTTCATTCACTTCCTGGTACGTTC
AGGTTAAGCTGTACATGTATGTTAGGTTTGGGTTCACGATAAACCATCCA
GTTTCATCTAGTCGTCTGTCTATTATCAATTCTACCCCCAAAGACAAAAT
GATGTTTAACAACAATTAGTACATGATATATAAGTTTATAACCCTAAGCA
AGGGGCCAGTTCGGGTCTGTACACGTACTACTACTACTATATGTACAAAA
CTTCAAACCTTCAGAGATATCTTTGTGCATGATACACAGGCTTTGGGGCA
TGACCATAGAATAAAGGACTCTTTACGTGGTATACATGCATGTGTTCGCT
TATAAAGCATCTATAGGTTTGAGC Coding sequence (CDS) from alignment at Sc0000000:1066914..1069937+ >transcript:BL86140_cuf0 ID=transcript:BL86140_cuf0|Name=transcript:BL86140_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1227bp|location=Sequence derived from alignment at Sc0000000:1066914..1069937+ (Branchiostoma lanceolatum)
ATGCATTCTACTGCAGAACTGTGTGTCGGACATTCTGGGAAGGAGAGTGA
TATCAGTGAGACCCAGACAACAGACATGAGCCTGCAGCAGAAAACGTGTC
ATGTGAACTTTCCCCAACCCGACAACAGGCCAACCTCACAGGTACAGCAG
AGCAAAGGCGATATGGGAAGAGATGTAGTTAAAAACAGTGGTGAGAAACC
CTTCGTGTGTAAGGAGTGCGGGTACAGTGCGGCTAAAAAGTCCCGCCTAT
CCGATCATATGAGAACCCATACAGGAGAAAAACCTTACAAATGTGACCAG
TGCGACTATTCCGCTGCACGAAAATCCACATTAGATGTACACTGTACAAA
ACACACAGGTGAGAAACCCTACATGTGTAAGGAGTGTGAGTACAGGACGG
CTAAAAAGTCCCACCTATCCGAGCATATGAGAACCCATACAGGAGAAAAA
CCCTACAAATGTGATCAGTGTGACTATTCTGCCACTAAAAAATGCCACTT
AGCTAGCCATCTTACAACAAATCACACCCACAATTATGAGAGACCCTACA
GGTGTTGGGAGTGTGGGCACAGAACGGCTAAGAAGTGTCACCTATCCGAG
CATATGAGAACCCATACAGGAGAAAAACCTTACAAGTGCGACCAGTGCGA
CTATTCTGCAGCACGCAAATCCCATTTGGACCAACATCTTAGAAAGCATA
CTGGTGAGAAACCCTACATTTGTTGGGAATGTGGGTACAGGACGAGTGAA
AAATCTAACTTGACTCGACATATGAGAAACCACTCAAGTGAAAAATCCTA
CAAGCGTGACCAGTGCGACTATTCCGCAGCACAGAAGTCCACTATTGACC
GACATCTAGCAAAACACACCGGTGAGAAGCCCTACATGTGTGGAGAGTGT
GGGTACAGAACAACTCAAAAGTACTATTTGTCCCGACACAGGAAAGTCCA
TACGGGTGAAAAACCTTACAAGTGTGGCCAGTGTGACTATTCTGCGGCAC
GGAAATCTCATTTGGAACAACATGAAGCAAAACACACGGGTGAGAAACCC
TACAAGTGTGGAGAGTGTGGGTACAGAACGGCTCAAAAGTCTCACCTGTC
CGACCATATGACAACCCATACAGGTGTAAAGCGTCACCAGTGTAACCAGT
GTGAATTATCTACCACAAAGAAATCTACTTTAGACAAACATATAGCAAAA
CACCACGACTATGCAGCAGGAAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1066914..1069937 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86140_cuf0 |
| Biotype | protein_coding |
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