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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82672_cuf4 >transcript:BL82672_cuf4-protein ID=transcript:BL82672_cuf4-protein|Name=transcript:BL82672_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=123bp
MTCLNHTSWTNAFSSQTTNWKTISKPFNKQLKCIAKISSMDCTVTFNMYY
NPWSKKLNTFSTFLDVFLCASSIHYLGLLFKLLSNFLYFHIDIDNLEPLV
KTGTLAVVNLCCSELSFSTVLSN Run BLAST on NCBI mRNA from alignment at Sc0000001:8678518..8681128+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82672_cuf4 ID=transcript:BL82672_cuf4|Name=transcript:BL82672_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2611bp|location=Sequence derived from alignment at Sc0000001:8678518..8681128+ (Branchiostoma lanceolatum)
TCATCTATTGTGTTTCTTCAACAAAAGTGGCCTTGGTGAAAACTGGGAAA
GCATGGCTTGAAATTGTGTGATAACTTACTTTACTGTGTGTTAGCATGGC
GTTATTCCTGTAGCAATCCCATATAGTAGATATCTTTTCATTTAGATCAC
GCCCATATGTGAATGGTGACATCTCTTGCAACTGTAGAGAAAATGTATAT
AGTGCACATAAAATGATATTTGGTGCTTTACAAATTATGCAGCTGCAGTG
CTTGAATGTTAATAGGGTTGACAGACAAGGAACAAGATTTTTATGCAATG
TAAACAAAGTAGATGCNAGAAAAAGCAAGCCTAACAAGAGGAAAGTTTTG
ACAAGAGGAACAGTATTATCAGATGAAGTGTATCTTGAAGATCTAAAAAA
AAACTAGCAGAACTTTGTTTGGAAACATTAAATCCACTTAAAAAATCAGG
ACAAAAAATCCATTAACCTTCTTCCTCCTAAGTATAAGGATGCTCAGACA
TTTGAAAAAAAGATTGTATTGATACAGGAATAGGCTGCAGGAAAAATGTT
AAAATTACTCATTTAGGACATAGTTTAATGAAAACACATCCCTGACAAGG
TAATGATATTGGTGTGGCTTTAGTCATCTATTGTGTTTCTTCAACAAAAG
TGGCCTTGGTGAAAACTGGGAAAGCATGGCTTGAAATTGTGTGATAACTT
ACTTTACTGTGTGTTAGCATGGCGTTATTCCTGTAGCAATCCCATACAGT
AGATATCTTTTCATTTAGATCACGCCCATATGTGAATGGTGACATCTCTT
GCAACTGTAGAGAAAATGTATATAGTGCACATAAAATGATATTTGGTGCT
TTACAAATTATGCAGCTGCAGTGCTTGAATGTTAATAGGGTTGACAGACA
AGGAACAAGATTTTTATGCAATGTAAACAAAGTAGATGCAGTGAACAGAG
ATTTGACATCCATTGATGACTTTTCATAGTATATCTGTAATGCCTTTCTG
TTACTAGTAAGAGTTTGCCTCTTTTCATGTAAAACCTACAGCCAAAGAGT
AATACGTTACCCAGAAACGTTTGGAAAGCTAACCAATTCTTGAGTCAAAT
TCTTACTATTTTTCACACTCCAGTTTAGTTTCATGACATGTCTTAATCAT
ACTTCTTGGACAAATGCTTTTTCTTCTCAAACAACTAACTGGAAAACTAT
CTCAAAACCTTTCAACAAACAACTCAAATGTATTGCTAAGATTAGTTCAA
TGGATTGTACAGTCACTTTCAATATGTATTACAACCCTTGGTCAAAGAAA
CTGAACACATTTTCAACATTTCTTGATGTATTTCTTTGTGCAAGCAGTAT
ACACTATCTGGGTCTTCTGTTCAAGCTCCTGAGTAATTTTTTGTATTTTC
ACATTGACATTGACAATCTAGAACCCCTTGTCAAAACAGGAACTCTTGCT
GTAGTCAACTTGTGTTGCTCTGAATTGTCCTTCAGCACCGTTTTATCTAA
TTAGTGAACTGCATATTACCCTTTCTACTTCTAATGTCTTTATTGGGAGC
CAGATTGTGGACTAATCACCAGGAAAATGAAGACAAATGTCCACAAATAC
AGCTGTAGTTCACCACATCTCCCCCGTAAATAGACCTAAAGGCCTCGTTT
GTCTCTATATCATGTTAGTTGCGCAGTATCTGTATGAAAATGTCAACCAA
TTTTTGTTTGATGCATGATTACAGTAAGATAACAGAGTTATTGGGTGACC
TTTGGCTTCTAAAGATATACCTATTCAATGTCTGATTTGCATTGCGTTTT
GATTATCGCTGATTCTGTCGCAGATTGACAAGAGTTCAGACTGGTATAAA
TCATTCTCTATGCACACATTTGTATTCAGACAGTGTGTAAGGCACATCTT
TTAAAATTCTGTGTTTTCCATTACATGCTTTTTGTTGTAAAAGAACACTG
AAAAGATCACATGCAAACCTTGTACATGTATGGTATTTGTCATGATTCTT
TAGTTATTTACAGTTTACAAGGTAATCATTGAAATAATTATCATACTTGC
CGGTACGGAAATTCTATCACTGCAGTTGTATTGTGTAATCCTACTGTATC
AATTGTGTATAATCAAAATGGGTTTTTGATATGTTGACTATTTGAGGAAT
TTGTGTTTGTTCTATATAAATCATCCTATGTGAAAACAGCCATTAGTATG
CACTACTCTATCTTTTGCCACATTTGCTTGTCATGTCTTAGATATTAATC
ATCATGATTTGACTGCTTATGAGACTATCATGACAGATCATATGATGAAT
GATGTTTTGTATGTTTTATGGCTACTTGGATATCTTCTCAGATATTTTTG
GACCTATGGCATTTTATGATGGGAAATAAAAAGAGATTTTGAAAAACAGA
CTTGAAGTGGGTGTGATTTTTGGATTACCTTTATGATTATGTATCATCAT
GAAAGTTTTACATCAGAAAAAAACTTTATGATGGTTTTACAGGTAGTCCT
CTCCATACCATCTACTGGTAACGTTATATGTAAAGATTGTTATAAAGTGT
AAAGCCAGGCTCATGAGTAGCAACAACTATATTTGTTTTTTTATGATGAA
GCACTTGAAGG Coding sequence (CDS) from alignment at Sc0000001:8678518..8681128+ >transcript:BL82672_cuf4 ID=transcript:BL82672_cuf4|Name=transcript:BL82672_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=372bp|location=Sequence derived from alignment at Sc0000001:8678518..8681128+ (Branchiostoma lanceolatum)
ATGACATGTCTTAATCATACTTCTTGGACAAATGCTTTTTCTTCTCAAAC
AACTAACTGGAAAACTATCTCAAAACCTTTCAACAAACAACTCAAATGTA
TTGCTAAGATTAGTTCAATGGATTGTACAGTCACTTTCAATATGTATTAC
AACCCTTGGTCAAAGAAACTGAACACATTTTCAACATTTCTTGATGTATT
TCTTTGTGCAAGCAGTATACACTATCTGGGTCTTCTGTTCAAGCTCCTGA
GTAATTTTTTGTATTTTCACATTGACATTGACAATCTAGAACCCCTTGTC
AAAACAGGAACTCTTGCTGTAGTCAACTTGTGTTGCTCTGAATTGTCCTT
CAGCACCGTTTTATCTAATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:8678518..8681128 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82672_cuf4 |
| Biotype | protein_coding |
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