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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000256:30102..33898+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01541.0 ID=Blg01541.0|Name=Blg01541.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3797bp|location=Sequence derived from alignment at Sc0000256:30102..33898+ (Branchiostoma lanceolatum)
CACAAGATCACATCATTCTCATTTGTGCTTTACAGACAGTTCTTCGGGTG
TGTCAATTGAACATTGACATTGACCACCATGGCGACGGCGCTGAAAGTGT
CGCACATTGTCTTCCTAGTTCTGAGGCTGCTGGCAACATCGGAAGCAGGT
ACTTTCCTTTATTCTACTTCATGAAACCTGATCATTAAAGTTTTTGGTAT
TTCAAAAGATATGTCACTCAATAATTCACGTTGAACAGTTTCTGTAACCC
TCTTGAAAACTTTAACTTCGATATCTTTCCGTCTTCCTGTTTCTTTGGGT
AGGTTTTCCACGACTGCACTTTTACGGACTGTTCCTAGCCGACACAAGCA
CCCTCAACAACGACCCTTACAACTTCAACATCGACAACTTCAACATACAC
CGAGACCCGCCATGCTACCCCGACTACACCTTCCCACACTGTAACTGGAA
CCCGCGAGGCAGCGGTGACTTCCGACTGGTCAACTCTTCAGTCACCAAAG
TCTGCTACAGGAACGGAAAGTGCACAACAACCGACCCCATTGTCGGGAGA
CGAATCACAGGTGTGTTAAGACTACTCTGTGTATGCATGATTTACACCGG
GAGTCTACAGAGGCGCTGCCACTGGTGCTAGTGAGAGCGACAAGTACATG
CTTGATGACAAAGTTGAGAACTGAAGAATATCTGAATAGGTGGAAGCGTG
GCCTAATCTTGATTCAGAATGGATTAATCTAAACACACGGTGCCTTGGAG
CATGGTCCTTGTGACCCCTGAATTCAGGCTCCGGCCTAGATCGCTACACC
CCCTAAGGGTCCCCTCAAAATTGTGACCGAGTCATAATGATACAATGTAG
TGTAGCTATGATGAGCGTGGCCAAGTTATGAAATGTACTTAATCAGCTAA
TTTTCCACACAGGAAATGACGACACAGTGTCGGCCAAGATTTCGGATCTG
GACCCTTACTACCAGATGTACTCTTCCCAATTGTGGGGTCTTATCGTCGG
GGTAGAGGGCGCTTTTCAGGGCAAGTTCAAGGTCAACACAGTGATGGACA
TATGGCAGCGATGTAAGGAGGAGGAGTGTGACGGAGATCCCGGATCGTCA
GGGTACTGGAGTTCTGTGCTGGAGGATGTGACGTGGTTGGATCAGAAAAA
TAAGAACGACCAAAGTAGTACACAGACAAAAACATTTATCGACCAACTTA
AGTCTCCTCGTGGAGAAACGTCGGCGAAAACAACACTGAATATAAGATTT
ACGGTAGATATGATGAATGAAGATCCGCGAACCCCCAACTTTGCCCATGG
ACGAGTGGTCGGAAGTATCTCGACTGTGGATGACGAGGAGACCCAAAAGA
GTGGATTCCCTGAGTTCAACAGAATGCTGTGGGGACAGGGGGTCATCAGT
GCCTTAAACGGAGAGCAGGTACTGTCGGAGATGATGGACTACTACCACGC
ACCATTCTACGTGGACGACAGGAACAACAAATTTAAAGTCATTGTAGACC
TCAGCAATAGTTTACCAACATATATTAATGGTACACTTGTCAACAAAGGC
AACCTGTTCCTTCTCCTGATTCCCAGCCAATCTACTTTGTCAACAGAGGG
TGGAATAATCAAGAACTGCGAAGACACCCCTGCCAACAACGTAGTTGGCC
CAATTGATTATACTTCAGATGAATTTCTATTGCAAGATGCAGGCATCGCC
ATCTTAGACGTGGACATGGAAGCGGACATGGAGTCAGTCGTTATGATTGT
TCTCTGTCAATCGGAAGAGTGCAAAGAGTGCCTACCGGTCCTTATCGAGC
AAACAGAAGGTCTGTACATCGGTGCAGCTGAAGACTGGATTTTCCGCATC
CCAGCGCCTTTCACTTACATGAAAAGTTCAGTAGAAGATATTTATAAGAC
TGGCAATGTTACCTGGTCGTTAAAGGTATTCGCTACAGAGTTTGGCAAAC
CCAAAGAAGGAATTAGGATCATTGCCTGGTACACTACAGATGGAAGGGAC
ATCGGCACACCTGAAAATGTAATTACAGTTGTCTCTGACAATGCTGATTA
TGACCAAAAGTGGGAATATGGCATAAATACTACAGATGAACATGGGCTTA
CATTTATCACGTTTCAAACACACAGGGGGGGTCTTGATTGCACCAACGGA
GGACGGGAGAATAGGAAACAACAGCAAGTGGATGGGCAGTTGTACGCCTA
TAAGATCACTTTAAATGATGAGAAAGCCTTTCCTCCAAACCTACAGACGG
TAACACGCTTATATTGTAAACATGAAAGGAAAAAGCACTACACATGGGTC
GATGACATTTATCCGATATGTCAGCAATACGACAATCTGTTTCCTGTGAT
GAAGCCTCTTTTCAATCTCGCCTCCTACAAAGAAGTGATTCGGAAGTCTT
CACAATTAATGCTCTCCTTAAAACTGCCTATAGAGGATCCAAACCACATG
CCCGTCACTCGTGATCTCTCCCCTGCACAGAGGAAAATGGTTGTACACTG
GTTAAAACAACCTGGTACTAAATACAGACGCATGATCCAAAAGACTGATT
TAGATGAGTTGAAAGAAAATCTCCAACTAGCACTGCGGATAGAGTTGGCT
ACGATCCCTCCGTACCTGAACGCCTACTACAGCATCAAAGATGGCTTCAA
CACCGAAGTCGCTAGCCTGCTGAAGAGTATCGTGGTAGACGAAATGAATC
ATATGACATTGGTAGCCAATATCCTCAATGCCATAGGCGGAACACCGGTC
CTGAACGATCCGGACTTGATTCCCACGTTTCCAGGACCACTGCCAGGAGG
CTGCCACCCGAACGTTGTCGCACAGTTGGACAAGTGTTCTCTTCATCAGA
TTCATGATGTATTTATGGCAATAGAGAAGCCCGAATGCTCTAAGGAAATC
TATGACAATATTAGTTATCTTAAAACGATTGTTCCTAACACCATTGTGAT
GCCGAACCTGGCCGCATTTGTTTCGACCGACGTTCTTTCAAACGACTGTG
ATCCCCAAACATGTCCAGATTCCATGACAAAAGTGTACACAGATTTGAAG
TGCTTCGAATTTGTAAAGAACTATCAACCAGACACAATAGGTGCCATATA
TATCCACAAAATATTATGCCCAATGATACATCTCTACATCGACGACAATC
AGTTGTTCAACGGCGACCCGAAAAAGCAATATCCCGCGCCATTTAAAGTG
ACAGACCTGTGCACGGCAATCCAGGCAATACAACAAATTGTCAGCCAAGG
AGAAGGTGGAGATCCATGCGACCCATTTTACACAGGACCAGGAGGCAAAC
CAGAACTCAGCCACTATTACAAGTTTGCTGAGATAGCACATGGCAAGACG
TTAGTTGAAGCTCAGCCACGACAGCATACTCGTAAGCATCAGCAGCAAAA
ATATCAGCAAAAAAATCAGCAAGACAACGATGTCTTCAGCCCATGTAAAG
GCCAAATTTCTTGTTCTGAGAAATATGAGTTCGCCGGTGCTCCTATACCC
TTTTATCAAAACGCGGTGTGGCCCACTCTCTCCAACCCCAGGTCATCCAA
GTACCCACCAGGTTCCAGGGCGCGCAAGATGTCCGACCGCTTCAACGAGA
AGTACACCAGTCTGATGAAGTGCCTGCACGATATGTTCAATGGAAACCCG
GGCAACATGAAGAAGTGCTTCGGTATAATGTCATCCCTGACAGTGGATGC
CAAGAGAATGGTGCAAACACCCATCTACCCTGACGGAGACCCCAACATAG
GGCCGAATGTGGCTCCTACATTCGAGTGGTATCCACCTGTCAACTGA Coding sequence (CDS) from alignment at Sc0000256:30102..33898+ >Blg01541.0 ID=Blg01541.0|Name=Blg01541.0|organism=Branchiostoma lanceolatum|type=CDS|length=1725bp|location=Sequence derived from alignment at Sc0000256:30102..33898+ (Branchiostoma lanceolatum)
ATGGCGACGGCGCTGAAAGTGTCGCACATTGTCTTCCTAGTTCTGAGGCT
GCTGGCAACATCGGAAGCAGGTTTTCCACGACTGCACTTTTACGGACTGT
TCCTAGCCGACACAAGCACCCTCAACAACGACCCTTACAACTTCAACATC
GACAACTTCAACATACACCGAGACCCGCCATGCTACCCCGACTACACCTT
CCCACACTGTAACTGGAACCCGCGAGGCAGCGGTGACTTCCGACTGGTCA
ACTCTTCAGTCACCAAAGTCTGCTACAGGAACGGAAAGTGCACAACAACC
GACCCCATTGTCGGGAGACGAATCACAGGAAATGACGACACAGTGTCGGC
CAAGATTTCGGATCTGGACCCTTACTACCAGATGTACTCTTCCCAATTGT
GGGGTCTTATCGTCGGGGTAGAGGGCGCTTTTCAGGGCAAGTTCAAGGTC
AACACAGTGATGGACATATGGCAGCGATGTAAGGAGGAGGAGTGTGACGG
AGATCCCGGATCGTCAGGGTACTGGAGTTCTGTGCTGGAGGATGTGACGT
GGTTGGATCAGAAAAATAAGAACGACCAAAGTAGTACACAGACAAAAACA
TTTATCGACCAACTTAAGTCTCCTCGTGGAGAAACGTCGGCGAAAACAAC
ACTGAATATAAGATTTACGGTAGATATGATGAATGAAGATCCGCGAACCC
CCAACTTTGCCCATGGACGAGTGGTCGGAAGTATCTCGACTGTGGATGAC
GAGGAGACCCAAAAGAGTGGATTCCCTGAGTTCAACAGAATGCTGTGGGG
ACAGGGGGTCATCAGTGCCTTAAACGGAGAGCAGGTACTGTCGGAGATGA
TGGACTACTACCACGCACCATTCTACGTGGACGACAGGAACAACAAATTT
AAAGTCATTGTAGACCTCAGCAATAGTTTACCAACATATATTAATGGTAC
ACTTGTCAACAAAGGCAACCTGTTCCTTCTCCTGATTCCCAGCCAATCTA
CTTTGTCAACAGAGGGTGGAATAATCAAGAACTGCGAAGACACCCCTGCC
AACAACGTAGTTGGCCCAATTGATTATACTTCAGATGAATTTCTATTGCA
AGATGCAGGCATCGCCATCTTAGACGTGGACATGGAAGCGGACATGGAGT
CAGTCGTTATGATTGTTCTCTGTCAATCGGAAGAGTGCAAAGAGTGCCTA
CCGGTCCTTATCGAGCAAACAGAAGCACTGCGGATAGAGTTGGCTACGAT
CCCTCCGTACCTGAACGCCTACTACAGCATCAAAGATGGCTTCAACACCG
AAGTCGCTAGCCTGCTGAAGAGTATCGTGGTAGACGAAATGAATCATATG
ACATTGGTAGCCAATATCCTCAATGCCATAGGCGGAACACCGGTCCTGAA
CGATCCGGACTTGATTCCCACGTTTCCAGGACCACTGCCAGGAGGCTGCC
ACCCGAACGTTGTCGCACAGTCATCCAAGTACCCACCAGGTTCCAGGGCG
CGCAAGATGTCCGACCGCTTCAACGAGAAGTACACCAGTCTGATGAAGTG
CCTGCACGATATGTTCAATGGAAACCCGGGCAACATGAAGAAGTGCTTCG
GTATAATGTCATCCCTGACAGTGGATGCCAAGAGAATGGTGCAAACACCC
ATCTACCCTGACGGAGACCCCAACATAGGGCCGAATGTGGCTCCTACATT
CGAGTGGTATCCACCTGTCAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01541.0-exon-Sc0000256-1570713199:30102..30249 | Blg01541.0-exon-Sc0000256-1570713199:30102..30249 | Branchiostoma lanceolatum | exon |
| Blg01541.0-exon-Sc0000256-1570713199:30404..30661 | Blg01541.0-exon-Sc0000256-1570713199:30404..30661 | Branchiostoma lanceolatum | exon |
| Blg01541.0-exon-Sc0000256-1570713199:31014..31910 | Blg01541.0-exon-Sc0000256-1570713199:31014..31910 | Branchiostoma lanceolatum | exon |
| Blg01541.0-exon-Sc0000256-1570713199:32682..32925 | Blg01541.0-exon-Sc0000256-1570713199:32682..32925 | Branchiostoma lanceolatum | exon |
| Blg01541.0-exon-Sc0000256-1570713199:33643..33898 | Blg01541.0-exon-Sc0000256-1570713199:33643..33898 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000256 | genome | Sc0000256:30102..33898 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01541 |
|
