BlTCONS00008153 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00008153
Unique NameBlTCONS00008153
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000002:5298762..5300947-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00008153 ID=BlTCONS00008153|Name=BlTCONS00008153|organism=Branchiostoma lanceolatum|type=mRNA|length=2186bp|location=Sequence derived from alignment at Sc0000002:5298762..5300947- (Branchiostoma lanceolatum)
GTCAAATGTCACAAAATGTGCAACATTCGCACGAATGAGACAACCGACAT TGATGAAGAGCCTTTTCCGCCTGGTTTCTTCAGAGTCAGCCACACCCACA ATATTCTCTAGCGTACTGTTGTGTGATACGGCCGGATAAGAAGAACAATG TATAATGTTTAGTGCTTCGGTGCAGTTTTTTATGCGTGCTCAGGAGTAGA AATGACCATAGTAGTCATGCCGAGGCGTTGGATCGTGTTGGCAATTTTGC TCTGTTTCCTCGGAAACGGATTTCTTTCTTGCGAAGGTAGGTGTCAATAC TCTTTATCATGAAACGCTTTCATTGTGTATTTGGACACTTAGCCTTTAGT CATCTATCGGAAGGGGAGGGGTAAGATGTGTGGGGGAGAGAGATACAATC TCTTAATATGACAGGTCAATATAGCATGTAAATTAAATGGCATGGGTGTC GTGGGTGGGGGGATACCATTGCTGTCTGGGAGGAAAATCGTTCATCCTGT AGATAAGTTGATACGACTACAATATCTGAGGACAAATCGCAATCGACGTA CGATCGAAAACTCAGGGCTTTCTTGTGACGACGGTGATTCCAACTGTTTT GTTAGGGGAAAGGCTTTCATTGCTCCTTGTAGTCTTTTGGTTCTGTCGCA GCCTGCTTAAAAATATACGATATTGATAAAATGGTATGGCGGCTTACGGT GAATGTGATCACATGGTAATAAAAAAGACAGAAACGGGCTACTCACACGC AGGATTTCAGGTCGAAGGAAAACGTTTTCACAGTCAGACATTTGTGTCAA CCTTGAATCCATCCTCGATACATACTTTGTCTGTTAATATAGAGTCCGTT GAGCCTATAATTTTGCCTTCAACATTGATATGAAATGAGTCTATTCGACT CAAAAAGGTACTTGTAGTAAAATCCAGCAAATAAAGATTAACATGGCACA CCATATTATTGCTCATTCGTATGAAACTAACAGTAGTCACTATATTATTT TTCCTACATACCATAACAAGATAGACATTTATCTCATTTGTTTAGGTCGG AAATCATTTGAATTTTTCCCCCACATATTGTCTCGTGTTCATCATCGTTT ACAAAACCAGAAATCTGAATTTGTCCGTTTATTTCTTCAAGGATGCCTGA CCACGAAAGGCAAAGAGTTTGTGTTGTCCTTTCTGGAAACCTTCAATAAC GAGCCACGGCTCTACATAACAAGCGACTCTCAGACATCAGTGACCATAGA GGCCCCGGCGGATGGATGGAGCACAACCGTGGACGTGAGTCCACATGAGG TAAGACCTCTGGTGATGTTACCTCCATTTAAGATGGAGGGGTCTTTTTGG TGGGGCGGGGGGGGGTTGGGGTCTTGCTGTGTGTTTGTTTGTGTGTTTGT GCTTCAGGATATTTGTGGTCAGCATACTTTAAGAGCCTCTGGATGGATTA TGATGATATTTGGGATGTTGGTAGGTCTTGATAAGACAAGTCAAGGTAGA TTGTTGGACTCCTGACGACTTTCTCTGGTACTGTAGCAGAGCTTATGGTT TGTGTACCCTTTACTCTGGACATGCTTTGGTCTTGTTGAAGTTGAGTTGA GTTGAGTGAGGTTGAGTTGGAAAAACAGTAAGCATCTTTCCTCATTTTTA TAGCTTGATAAGTCATATTCTGCACCCTTTTCGAAGATTGCACATGACTG CTGACCACTGATTAAGTACAACAGAAATATACAAACACGTAAAGCCCCAT TTCCACTAAACGGCGACCGTTGTGTGCGGACCAAAACTGGATTTGTGTGA TTCTTGCTTTTGTGATTGAAATATGAAATAAAAGACAACAAGACACACAA AACTGTTCTTGGTCGCAGCCTCTAAGTAGAAAGGGATTACAACAGATCAG CCATAAAGCAGAAAATCGCATAGACCTATTTTCAATGATACCATTCAGTA TTGATGTATTACAGCAAAGGCTGTTATTGAAAATGTAACAAAGGAGGGTA TGTCACTTTACCAACACAGAAAGTGATAGTCACGTTGCCTCGGAGCTCGG TCGAGATGAGCGGCAGTCAACCCGACAACAAAGCTGTGTACGTCACTTCC GACAAAGACATCAGCATCCTGGCTGTTTCCGGCGAACCGGGGCTCATCAC AGGCACCTATAGGGCTTTGCCGATTACATTCCTCGG

Coding sequence (CDS) from alignment at Sc0000002:5298762..5300947-

>BlTCONS00008153 ID=BlTCONS00008153|Name=BlTCONS00008153|organism=Branchiostoma lanceolatum|type=CDS|length=408bp|location=Sequence derived from alignment at Sc0000002:5298762..5300947- (Branchiostoma lanceolatum)
ATGACCATAGTAGTCATGCCGAGGCGTTGGATCGTGTTGGCAATTTTGCT
CTGTTTCCTCGGAAACGGATTTCTTTCTTGCGAAGGATGCCTGACCACGA
AAGGCAAAGAGTTTGTGTTGTCCTTTCTGGAAACCTTCAATAACGAGCCA
CGGCTCTACATAACAAGCGACTCTCAGACATCAGTGACCATAGAGGCCCC
GGCGGATGGATGGAGCACAACCGTGGACGTGAGTCCACATGAGAAAGTGA
TAGTCACGTTGCCTCGGAGCTCGGTCGAGATGAGCGGCAGTCAACCCGAC
AACAAAGCTGTGTACGTCACTTCCGACAAAGACATCAGCATCCTGGCTGT
TTCCGGCGAACCGGGGCTCATCACAGGCACCTATAGGGCTTTGCCGATTA
CATTCCTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00008153BlTCONS00008153-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00008153-exon-Sc0000002-1564993656:5300662..5300947BlTCONS00008153-exon-Sc0000002-1564993656:5300662..5300947Branchiostoma lanceolatumexon
BlTCONS00008153-exon-Sc0000002-1564993656:5299649..5299806BlTCONS00008153-exon-Sc0000002-1564993656:5299649..5299806Branchiostoma lanceolatumexon
BlTCONS00008153-exon-Sc0000002-1564993656:5298762..5298928BlTCONS00008153-exon-Sc0000002-1564993656:5298762..5298928Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000002genomeSc0000002:5298762..5300947 -
Properties
Property NameValue
GeneIDBlCUFF004079