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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000002:5280746..5286531- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00008152 ID=BlTCONS00008152|Name=BlTCONS00008152|organism=Branchiostoma lanceolatum|type=mRNA|length=5786bp|location=Sequence derived from alignment at Sc0000002:5280746..5286531- (Branchiostoma lanceolatum)
ACGTCCGTCGTCTTGGCTGGCTTGATAATGAACATGTGGTCAGTATATTA
TGTGACATTATCTGTAGCTACAAATATGCTACTTCTATTCGTTAGTGCTT
TCACCAAGAAGGGTATGCTTTAAGTATCGTTTTTTTGTATGTATGTATGT
ATGTATGCAGGTATGTATGTTTGTGGTTTAGCAGAATAACTCAAGAAGCG
ATGGATCGATTGTCATGAAACTGGATATGTGGTTAGGTCATGTCCTATCA
AAGACATGATTAGATTCTGGGCCCCTTGGCGACTTTCCTTGACACAGCAG
CAGAATGTCCGCATTCGATTCAGCACAATCATTTCTATCGGATAGATTAT
TTACGGACACTGCCTTTCGAATTCCCTTATTATAACATTAGACTGTGTGT
GGACTTAGTATGTCAATTTTTGTGTTCAGACGAAATCATGTTTTACATTG
TGAGTATTATGTGCTTGACCCATAAACTGAACGAGAAAACAATTATCAAT
TAGGCCAGTTTTTAGAATACGCATGACGTAGATACAGAGTCATGCCGTCT
GTTTTTCCTAAAGAATATTTCTACGATTCTCGAGTACGTCCTGGCCTGGA
TTGACCCCCGACTGAAGGGTCTGACGGACTCCTGGGTTCCCGTCCCTCCG
GACTTAGTGTGGACACCGCCTCTCAGCTTCGGACGGAACGTCAGAAGTAC
ATCTATCGTGGACAGGGGGAGCACGTCTGACAGCGGTATATCCCTGTGGC
TGCACAGGAGCGGACTGATCGTCTTCAGGATGATGTGAGTACACGGGGAC
AAATAACATTTGCCTGCAGCTCCAACCAGGAGGCTTCCCGGTTATCATCT
AATTGGAACCAGGAGCTCAACGGTGACGCTGCTATCAAAACCACCCACCC
AGTATGAACGCAACTAGCACACGGGAAATATATAACAACCCAAAAATATC
TCCCCGTGAATTAGTAGCCTCTTCCATCGACCCCATGACCTGTCATGTCT
GATACTTCCTGTCACTCCGCAAGTGTGACCTTTGCGGTGAATTCATCTTC
CCATTCACTTCCTACCACTGTACTGACATTGTATTCAAATATCTATGTGC
GGACACACAAAAACACAACAAACAGACACACTTAAAACAAAGCCTCCCAT
GCGAAGCTTTCTACAGTTATTCTACAGTGTACAACTAAACTATGTTGGCC
ATATCGTGTACTGTTTTCTAATTGTTTGATATGCCTTTGCAGTCGTGATC
TACACGTATCCTGTCCAGGGGTGACGTTTGAACACTTCCCATTCGACAGC
CAGGGCTGCAACATGCCGCTTCATGGATGTAAGTACTCCCTTTCAACATA
GTTGAAGACCGTTGCGCGGCCAAAAGTTGGATAGCTCAATGGCCGTACAA
TGACCTAAACTGTCAATAGAAACACAAAAGCGTGCTCTTTATTTGATGGT
CACTAGATGAATAAGATATGGATACTTAACCACCTGTTTCTAATGTTACC
GGAATAATACATCTAAAGCACAGCCAGTAGGTACCCATCTGAGTAATGGG
GATTTTGCAGTGCTCCCCCGGTTACGGGTCCCTTCTGAAATATGAATGCA
GCTCCAACCAGGATTTGTTTATTTGTTTATTTTGATTTTTCACAAAAGTG
AAGGGGAGGGCAAAACAGGTGCTTGCGCACCTTTAAAAGTTGCCCTCCAA
AACACAATACATTACATTCAAATATACAAATTCGTACATACAAATATGGA
ATAAAGGATGCCCTTCCCCGGATTCGAACCGGGGTCTCCCGATTGCCAAC
TACTTGGAACCAGGAGCTGAACTGTCAGGCTGCTACCAATTGAGCTACAG
GGACATCCCTATAACGCAATGACGTTTTCATTTTGCCTACTCTACCTGCA
GATGACGGTGTCAGGTTCCAACTGGTGTCCTTCACTGACACGTCTCGGGA
CCAGATTAAGACTGACAGCGCCGAGGTGGTGTCTCAGTTCATGCTGAGAG
GGGTGCAGCTGTCAGGGACCTTGGGGTCATTTCTCACCAACGTCTCGGGT
ATGGGTGTTTGTAAACGATGCTATTACAGAGATATTGTATTGACAATCAA
AAATTGTAAAGTAGCATATTCAATTTCTGTACAAGTGAAACCAGTGCCCC
ATGGGATGTGGTTTTACGTATAACAGATGTTAGTTGGAAATAGCTAGCTA
TAGTCTACATCGAAGTCAGAAGCATGCATGACAGACCTTCAAACATATAT
ACAGTGTATATCAGGGTAGAGATTGCGATCCGACAGAGATCCCACTTGGA
GATTCCGTCGACGGGAAAACTGATCAGGATGCTAGGAATATGTTAGGGTG
GTCTTTTATGAAATTTGTATGAAATCCTAAATTTCGAGTCAATTCATTCA
GCTTAAGCGACACGAATCGTAGTTTAAAAGTTCTGTCTTTTAAGCGAATA
TCTTAGAATTAACAGACTCCGATTGGGATCTCTCACTGGAATCGGCAATC
TGCAGGTAGAGATCCCGATCGGAGTCTCCATCTGTATTTCTCATACTATC
GAATTATTTCAGATTGCAATTACTTCAAGCAGTCGTGTGCATACCACGCC
GAGTCGTGCCCCTTCGCCAGTTCTGCGGACTGCCGCACGACCGTGGGGGA
GTGTGTGATGGAGGCGGTCGACTGTCCAGAGGAAGCACGGAGGGTACAAG
ATGAGGCACGCAGGGTGGCACGCAGCGCAAACAACCTTCACAAAGGTTTG
ACAGCTTTGACAATTTCCCATTCAACTTGCCTTGCACAAATGTATGGCAG
CAAGACATTCAGGGGTATCACGAGGTAACGGTAGCACAACTTTGTTTTCA
GTCTATGTCTTTGTTTGTTTGTTTGTTTGTTCTGGTGTGTGTTCGCAGTT
ATTTGAATATTGCAGAGTGGCTGGATGTGAAACAGAAAATGGTGTAACCG
GAGACTTGCAGGATGGAAAGGCTAGCTTAGCCCGGGTACAAAGCTAGTAC
CGCAGGAAGGCAGGAAACATACAGAATTAGAGAGAAATTCGTGAAAATGA
CTAAAACAAGAAAATTTACAAAAAGGCTAGATATTTCGCGGAGGTATGAG
ATCTTCGGCAGTTTGTTTAAACCAATGAACTTTTGTTCAACAGCATGTGA
TTTGTGATGTGTTGACACTGTGTTAGCCTCCATTGTAACCGCCGGCTCAA
TATTTTCGCCGTTCCGTGGTTAGCAAGCTTAAGATTTATCCAGCAGTTAC
TATGGAGGATGGTACTCAGGCTAACATTGTGTACGATCTGTTTCCAGACA
CCAACAGTTACACCACGGTATCCGTGAAGCTGGGCATGACCCGGCGGCTG
TGGATCTACATCTCCACCACGTTCATCCCGTCCTTCATCCTGGTGGTGGC
GTCTCTCATGCAGACATGGCTGCCGCTGCACCAGAAGGCCATCTCCGGCC
GGATCACCCTCGGGGTCATCCCACTGCTGGTCATGATCTCTAAGGGCGTC
CTGAAGCACAGGATCCTGTGGGCGAGTAACCAGATAAGGCTTGAAAAATG
TTGTGTTTCCAAGTACGGTCCTGCAAAAGATTATGGTCGGTAGGTAGGAA
GCAAAGAAGTACAATGCTTGGTACACATCCTTGCATCAACTGGTTAAAGC
CAAAATCTGTTAAATATCAGTGTGAAATGCAGGGATTCTGTTTTGAATTT
CAGCACTAAGATGCCAGGTCGAAAATCTTATGTCCCTTGCCAGTGGTCAA
CCAAAAAAAGGCTAGGGTCGGCAGGTGTTTGCTAGGGTCCGTCGGGTAAC
AGAAACACATTTTTTCCTTGGCCTAAGCGATGTACAATATATGTATAAGA
ACAAATGTTTCAACAGATATATTGCACCTTTATGTACTTGCCCCAAACCT
TCAGATTTTCAACTTCAGACTTCAAAACATTCTCAACCTTGCGACATATT
TTACCATACATCTAATAGCTTTATGTGCTGTTTAGCTTCTCATATACAAT
TGTTTTAAGGGAAGAGACAGGTAAACAATTGATTAAGTGGTAGCATAACT
TTACATACTTAACTTTTTTGTTCCCGGCCTTGTTCACTATCAACACTACA
AGTAATGATATCTTACATGTACCTTCGAAGCTTCAGTCTTTGATGTGAAT
GTATAGCTACTGCATCTAGCCCGTGTGGGAAAGAACATGAAAATAAAGAT
CACTATCATCAATGTAATGATGGTTCATATTTTGGTTGTACCCGCAGGTG
TCCGTTGCAAGAGCGATAGACATTTGGCTGATCGTTTGTCTCGTCTTCAT
CCTCCTGGCCTTGATGGAAACTATCGTAGTTTACTACATCTACAGCAGAC
GGGAGGAGAACCTCGAAGTAAGCGGTTTTATTAGATTAAATTAATTAGTT
TATTGAAAGTTATTACCCGTAGGCTAATTGCAAGTACATGTAACATGAAA
GACGGACAGACAATGGATAACAATATAGCATGAACTATTCCAAATACTGA
CACTAAATTCTAATTTATTTGTGCCGAGTCTGGGAGGACGGAAGATATGA
AAGAGTATCTTGATAATGAATCCCAAGAGATTTTCGGATTCAATCTGCTA
TACCTTTGATGGAGACCACCAAGGGTACCAGAGAAGGTTGGAGAAAGGCA
TTCTCCTCCGCAGAGCCTTACCCGCGGCCTATACATTATACCTTTTTGGC
AGGCTCTGCTGAACCGAGCTGAGGTTTCCACTATTGTGAAAGTGGCCTCT
AACCAGCTGTCCACATATCAGAGAGTCGCCTAAATGTTTTCTTTAGATTC
TCTGATTGGCTAGCAGCTGGTAAGAGGCCACGCTCACGTGCACAAAAGTG
GAAACCGCAGTCCGGTTTAGCAGAGCCTCCCCAAGGTATATTGTATAGGC
CACGGATGAGGCTCTGCGTAGGAAAATGGAGAAAGGTGGTTCATACAGTA
TCTGCGGTACCCGAACGGTAAACCAGAGTGAGAGTTATCTTCTGAATCTT
TTAGCAACCTTCACACCCACTTGGTATCATCATCATTACCACTGAACGTA
AGCAGTATTGAAAACGTTCATTCTAACATTTTGTGATTCTGTCTCTGCAG
CATCCGGTTGAGAAGAAGTCACGAAAGTTGAAGATCTGCATCCCTCGTGC
GAAGTACTCGAGTCCTCTCGGGATCTGGTGGGAGCAAGCGGACGGCGAGG
GGTGGAGAATCGCTTACATCCCGTCTGCCGAGGCGACAGGTGGACCGTCA
TCAGCCGTGATTGCGGAAATCCACCCGGAGCCGGGAATGGATGTATCCAG
GAGCCCAATCCCAACTGAGAGCAACATTCGCGAGGGCCCGCCGCGTCCTC
AAATTGCCTCTGGGGAAAGTCTCAACCTGCATGGTGAGGGAGACAGCCAG
ACCTCCGGATACAACACCATGAATACAACCGGCAAGTCATCCGACGATAC
CAGTAGCACGACAGACGACAGCATGGAGACTGACGTCACTGATACAGGCT
CTGACGTCATTGGCAGTGACTCTGACATGAATGACCCGGATGTATACGTG
TACGTAAGCCAACAGATTGACCACGTGACCCGCATAGTGTTCGTTGTTGC
CTTTTCAATCTTTAACATCTGTTTCTGGTCCTATTATCTGTTCATATGGT
CTATAGGTTTAATCTGAATGTGGCCCTGCAACACAGCACTTAGTTTGTGC
TTTAGTCATTGACCACATTAGGTACATTATGTAGATTGTTGTATAAGGCA
GCTATTGTATCATTTGTATCATATACTTTTAACATG Coding sequence (CDS) from alignment at Sc0000002:5280746..5286531- >BlTCONS00008152 ID=BlTCONS00008152|Name=BlTCONS00008152|organism=Branchiostoma lanceolatum|type=CDS|length=1584bp|location=Sequence derived from alignment at Sc0000002:5280746..5286531- (Branchiostoma lanceolatum)
GTCCGTCGTCTTGGCTGGCTTGATAATGAACATGTGAATATTTCTACGAT
TCTCGAGTACGTCCTGGCCTGGATTGACCCCCGACTGAAGGGTCTGACGG
ACTCCTGGGTTCCCGTCCCTCCGGACTTAGTGTGGACACCGCCTCTCAGC
TTCGGACGGAACGTCAGAAGTACATCTATCGTGGACAGGGGGAGCACGTC
TGACAGCGGTATATCCCTGTGGCTGCACAGGAGCGGACTGATCGTCTTCA
GGATGATTCGTGATCTACACGTATCCTGTCCAGGGGTGACGTTTGAACAC
TTCCCATTCGACAGCCAGGGCTGCAACATGCCGCTTCATGGATATGACGG
TGTCAGGTTCCAACTGGTGTCCTTCACTGACACGTCTCGGGACCAGATTA
AGACTGACAGCGCCGAGGTGGTGTCTCAGTTCATGCTGAGAGGGGTGCAG
CTGTCAGGGACCTTGGGGTCATTTCTCACCAACGTCTCGGATTGCAATTA
CTTCAAGCAGTCGTGTGCATACCACGCCGAGTCGTGCCCCTTCGCCAGTT
CTGCGGACTGCCGCACGACCGTGGGGGAGTGTGTGATGGAGGCGGTCGAC
TGTCCAGAGGAAGCACGGAGGGTACAAGATGAGGCACGCAGGGTGGCACG
CAGCGCAAACAACCTTCACAAAGACACCAACAGTTACACCACGGTATCCG
TGAAGCTGGGCATGACCCGGCGGCTGTGGATCTACATCTCCACCACGTTC
ATCCCGTCCTTCATCCTGGTGGTGGCGTCTCTCATGCAGACATGGCTGCC
GCTGCACCAGAAGGCCATCTCCGGCCGGATCACCCTCGGGGTCATCCCAC
TGCTGGTCATGATCTCTAAGGGCGTCCTGAAGCACAGGATCCTGTGGGTG
TCCGTTGCAAGAGCGATAGACATTTGGCTGATCGTTTGTCTCGTCTTCAT
CCTCCTGGCCTTGATGGAAACTATCGTAGTTTACTACATCTACAGCAGAC
GGGAGGAGAACCTCGAACATCCGGTTGAGAAGAAGTCACGAAAGTTGAAG
ATCTGCATCCCTCGTGCGAAGTACTCGAGTCCTCTCGGGATCTGGTGGGA
GCAAGCGGACGGCGAGGGGTGGAGAATCGCTTACATCCCGTCTGCCGAGG
CGACAGGTGGACCGTCATCAGCCGTGATTGCGGAAATCCACCCGGAGCCG
GGAATGGATGTATCCAGGAGCCCAATCCCAACTGAGAGCAACATTCGCGA
GGGCCCGCCGCGTCCTCAAATTGCCTCTGGGGAAAGTCTCAACCTGCATG
GTGAGGGAGACAGCCAGACCTCCGGATACAACACCATGAATACAACCGGC
AAGTCATCCGACGATACCAGTAGCACGACAGACGACAGCATGGAGACTGA
CGTCACTGATACAGGCTCTGACGTCATTGGCAGTGACTCTGACATGAATG
ACCCGGATGTATACGTGTACGTAAGCCAACAGATTGACCACGTGACCCGC
ATAGTGTTCGTTGTTGCCTTTTCAATCTTTAACATCTGTTTCTGGTCCTA
TTATCTGTTCATATGGTCTATAGGTTTAATCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00008152-exon-Sc0000002-1564993656:5286494..5286531 | BlTCONS00008152-exon-Sc0000002-1564993656:5286494..5286531 | Branchiostoma lanceolatum | exon |
| BlTCONS00008152-exon-Sc0000002-1564993656:5285748..5285968 | BlTCONS00008152-exon-Sc0000002-1564993656:5285748..5285968 | Branchiostoma lanceolatum | exon |
| BlTCONS00008152-exon-Sc0000002-1564993656:5285204..5285289 | BlTCONS00008152-exon-Sc0000002-1564993656:5285204..5285289 | Branchiostoma lanceolatum | exon |
| BlTCONS00008152-exon-Sc0000002-1564993656:5284484..5284630 | BlTCONS00008152-exon-Sc0000002-1564993656:5284484..5284630 | Branchiostoma lanceolatum | exon |
| BlTCONS00008152-exon-Sc0000002-1564993656:5283787..5283969 | BlTCONS00008152-exon-Sc0000002-1564993656:5283787..5283969 | Branchiostoma lanceolatum | exon |
| BlTCONS00008152-exon-Sc0000002-1564993656:5283011..5283234 | BlTCONS00008152-exon-Sc0000002-1564993656:5283011..5283234 | Branchiostoma lanceolatum | exon |
| BlTCONS00008152-exon-Sc0000002-1564993656:5282165..5282284 | BlTCONS00008152-exon-Sc0000002-1564993656:5282165..5282284 | Branchiostoma lanceolatum | exon |
| BlTCONS00008152-exon-Sc0000002-1564993656:5280746..5281431 | BlTCONS00008152-exon-Sc0000002-1564993656:5280746..5281431 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:5280746..5286531 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF004078 |
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