|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000002:5119783..5127951- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00008139 ID=BlTCONS00008139|Name=BlTCONS00008139|organism=Branchiostoma lanceolatum|type=mRNA|length=8169bp|location=Sequence derived from alignment at Sc0000002:5119783..5127951- (Branchiostoma lanceolatum)
TCATCGGTGGGCTCACGTTACCGTTGGGCGAAAAACGTGACAGCATAACC
CTCAAGCCAACCGGCGAAAAACGTGGGAGCATAACCCTCAAACCAACCGG
TGAAGCCACCGCCGCCACAGGTCAGTATTCATTAATACATTCAATTGTGA
AAACCTACATATTTAAAAACAAATGGACTGCTAGGCATTATCGAAGATTA
TCATGAAGTATTGCACAAAATTCAGAAAAAATTGTTAAACATTTATTAGA
GTGGGGATGTCACTACCTATAAGATTAGTTTCGTTGGTAATGAAATATGA
AAAAAATTTATCCAGTTGCTTGAGTAGTTTTTAACTTTTTTTGTTGTATA
TTAGTTATTGCAAAGTTTCAAATTATTATAGGTTTTACATTGCTTTTCTG
TTCACATAGCAAAGTTCATTTGATCCATTGTTGAAAAAACAAATCAATAT
TCTGTACTTTAAAAAAAAGGTCAGGGGTCAGAGAAGGCGGGCGCGGCGAC
CGAGCTGAGTACAAAAGCCGAGCTGTTCCGTTCCCGGCTCATCCATGACT
TTAACATGCTGGACTCCCTTGGGGAGACAGGAGTGTTCACCACCCCCAAG
TACCACGCTCCGGAACTCATGGGTAAGTTTGTTTATTTGTTTATTATTTG
CACAACAACAAGAAAAATACAAGTTAGAGGGTTTGCATGGGGGTCCCAAC
ATGCTGCATTCCCTCGGGGAGACAGGAGTGTTCACCACTCCGAAGTACCA
CGCTCCAGAACTCATGGGTAAGCTTCACATCTAAGGGAGAGTCTGTATGG
CTTGCCCATTTTCCGCAAGGTTTAGGCAGGCAATTTGGATTTCCCATAGT
TCATAGAGAAAGCCGTCTTAAGGTCTCGGTTTGGAGGTTTTATTTACAAT
TCGGGGCCGACCTGACTCATTCCCAGAAAGGCAATAGCGCTTTTCCAATC
ATCCTTTTTTGGCTAATTCCGATGGATAGGGATGCCTTGCCTTCGAACGA
CAGACGAATTTGATATTCTCTGTGGAAACGTCATTTTTGGTGAAAACTGT
CATTTAAAGCAATTTTCATCCCCCAAAACTGCTATTTTGAGGGCATTCTT
CCAACGCCGCTGGAAGGAAAATAAGAGTTTTCCTACGATAAAGACTAATA
TGGGAATAAAGATCTTTATTCTGTCTGTGCAATTAGGAAAAATGGAAAAA
TCGTGAGGATACGTTTTCCGCAATCCCCGATGGTGCGAAACCATGCAAAA
TGCACATAGAACGCACGATTCGGGTAATTAATCAGGCGACAAGGCCGCAT
TATCGTCATCGTGCACTAATACCAGGAAGTCTTCGAGGACGACCAAAACT
CGGAAACCGTAAAACGCTACTAAGATTGGGTCTTTCAGGAAATGTAAAAG
ATAAAACACTGCTATAGCGATAGCCGAAAAATCGGGAGCCAAAACTAACG
AGAAAACCTAGGATTTGCGTCTTATCTTCACGGACTCTTTGGCTATTAGG
TCAAAACAATTCCGAACCAGAACCTTCATGTAATTCAAAGCAAGGTGACC
AAACTTCGCATGATTGTCTCACTTGATTTTAATGTAATACGTAGCATAAC
ATAGGGCGTTTTCCTGAATTCAGCATAAAGCATTGTTGGGAACCACCATG
TACATGCATATCATTTGCTTAGAATTGAGACACTACAATACACCGTACAA
TTACATTGCAATAGTTCCACCCGACCCATTATAACATGGAAGGGCACTTT
TAGGGACAGCATCTCTCCTTGGTGCTGAAAAAGAGTCATTTGTAGCACTA
GCTTTTATATCTTTACACGGGCTATTTTTTTGTTATTGTTTTAAATTTCA
GGTCTTTATGTTTAGGGCCAGTATCTCTCATCGGTACTGAAAGAGAAACC
ATTTGTAGTACTAGCTTTTATATCTTGTAGCACTAGCTTTTATATCTTCA
CACAGGCTATTTTTCTTGTTATTGTTTTAAATCTTTATGTTTAGAGGCGG
TATCTCTCCTCGGTACTGAAAAAGAAATCATTTGTAGCACTAGCTTTTAT
ATCTTGTAGCACTAGCTTTTATATCTTCACACAGGCTATTTTTCTTGTTA
TTGTTTTAAATCTTTATGTTTAGAGGCGGTATCTGTCCTCGGTACTGAAA
AAGAAATCATTCGTAGGACAAACTTTTATATCTTTACACGGGCCGTTTTT
CTTGTTATTGTTTTAAATCTTTATGTTTAGAGGCAGAGAAATGAGAAATC
ATTCGTAGGACTAGCTTTTATCTCTTTACACGGGTTGTTTTTCTTGTCAT
TTTTTCGTCAATGTTTTAAATCTTTATGTTTAAAGGCAGTATCTGTTATT
CTCATCATTGGGTTGAATCTTTATGTTTAAAGGTAGCAGGGTAGCACTCC
AGGCACCTCTGTCTGCTAGGTTGGCTCGAAGTAAGTCTTGACACTGTAAA
TTTTTAAAATTCCTTTAGACCCAGAAGTGATGAACAAACTGATGGTGGAG
AACCCGAACGCGCTTGTGAAGTTCCAGATCCACGAGCACGTAGACTCGCT
GATGGTGGACCGCACGCTTCGGCGCAAGAACCGCGTACGGAACAAGTACT
CCAAACTTCCCTCGCTCGACCTCTGGGCTAGCTGGATTCTCGAGAGTATC
CTTTACTAATCTAGAGGGTTTTTTGAGGGGGGGCTCGAAATTCATGTTTG
GGCCAGTAGATGCACTGGTGCACCTAACATAAGAATTTAATAGGTGCACT
GTCAGAAAGAATTTTGGATGCACAACATAATTGAGAGTATCCTTTACTAA
TTTAGAGGTTTTTTGAGGGGTGGAGATTAAAGAAGCAAGGCTCTAAATTC
ATGTTTGGGCCAGTAGATGCGCTGGTGCACCTAACATAAGAATTTAGGTG
CACAGAAAGAATTTTGGATGCACAAAATAATTGAGAGTATCCTTTATTAA
TTTAGAGGTTTTTTGAGGGGTGGAGATTAAAGAAGCAAGGCTCGAAATTC
ATTTTTGGGCCAGTAGATGCACTGGTGCACCTAACATAAGAATTTAGGTG
CACTGTCAGAAAGAATTTTGGATGCACAACATAATTGAGAGTATCCTTTA
CTAATTTAGAGGTTTTTTGAGGGGGGGAGTTTAAAGAAGCAAGGCTCGAA
ATTCATGTTTGGGCAAGTAGATGCACTAATGCACCTATTAAACATAAGAA
TTTAGGTGCACAGAAAGAATTTTGGATGCACAACATAATTGAGAGTATCC
TTGACTAATTTAGATGTTTTTTGAGGGGTGGAGATTAAAGAAGCAAGGCT
CGAAATTCATTTTGGGCCAGTAGATGCACTGGTACACCTAACATAAGAAT
TTAGGTGCACAGAAAGAATTTTGGATGCACAACATAATTATATTTCACCA
TACCTAGTATGGTGGAATATATTGTTTTCTCTCATGTTTCTTCTTCTTCT
TCTTCTTCTCCTCCTGTCAAATTTTCAAATCGATTCATCTCTGTCATTTT
TTGACCAAATGACCTGAAATTTGGTACAGAGGTAATGTAGGCAAAAACCA
ATGTGCGTTCTTTTCCTTTTTTTGATATTGACCTTGAAAGTGATTTTATT
GAGGTTTTTAGGCTATTTTTAGCATATCTTGGCCTCCTGCGCCCTGGTAT
TTCAACCGAATGACCTGAAATTTGCTGTATATGTGGCTTGAACAAATATT
TAAAGGACTACATTCCCATTTTTGGCATACATATCTTCAAAACGATCTAT
TTTGGGCTTTTTTGACAATATTTGCCACTTCTGTCACTTTCAATACTAAT
AGGCGCGCGGCATGCGGACGCGTCCATTTTGATATTGTGGGGGAGTAAGT
TGAATGTATCATTATTGATATAGGGTAAGAACAAGGTATATAGGAATGTA
TGCCTAAACAAATATGTCAAAGTACTTATAATATCATAAAATGTAGATAA
AAAGGATATAACGCCGGGTTCAACACCTTTTGCTGTCGAACTTGCATACA
CATCCCCCCGCTGCATGTCGGTTGGAAAGCTTCTGCGGAATTTTCCATCA
CTAGTACGCTAGCAGACGACACTCTGCGTCACGACCAACATTTTTCTATC
GTCAGATAGCAGAAAGTACTAACGTTACCAGGTAAGAAGTGCTTTAATAT
CCCGAATTCCTTCCCTACATTGTTATCTTATATATTACGTATAGAGATGT
TTGTGGTAATTGATAACGCTAAATATTTTGTGTCGCTTTCGTTTAGTAAA
CACATTTGAAAATGCCCGCTCTGTAATTTTCCATTCATGGGACCGCAGGC
AAGTGCTAGACCAGCGTCGTAGTGTTTTCGGAATAAAATTACCGTTCTCC
CTTAAAAACAACCGCCACCCAGAAAATATTTACATTTCTAGTAAGTAATA
GTTACTTGACATTTAATTGATGAATATATTGATAAATTTGTAGTCACGTT
TTTATATGATATGTGCGTATTACATTTTGTTGTTTTCATAACCTGCACGT
TCGCCCGCTGCAGACGACGGAATTTTCCATTCACGTGACAAGTGACCGCA
GGCAAGTGCTACACCATCGTTTTTGGAATAAATCCCCAATTTCCGTTAGA
AACGACCAAAGACACTTTTGGGCCTTACCCTGGATTTTTTTCATACATTT
TTAGTAAATAATGGTTACCTTTCATTTTATAAATAGATAAATAAAATGTA
TTTCTTTTCGTGGTCACATTTCGTATGTTACGTTTTGCTGTGTTCAAACT
CAGCAAAATTGGAATGGAACCACCCATATTTTCGNAATGGAACCACTCAT
ATTTTCGTTTGTCGGACTTTGTACGGTGGAGTAGAGTAGATTAAGAGTAG
AGTCTTCGGCCAACTACGCTCTCCTCTATAAACTAACCCAAGAACCAACG
GTTCAGTAACATTTACTTCGTAGAGATAGCGGACAATTTTATCAGGTAAG
AAATTATGTGCTCGGCACTCTGTTGTTTACGTATACAAATACCTATTGGA
TCATACATAATTAGCCCTTGAGTGCAAATATGGACTGGATATCAGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGTGAATGATATATTTGTGCCAGCGTCCCGG
CCCTTGCCACCCGGCACATTTGGTGGTAGCAAGGGGGATGGGGAACGACT
AAGGGTCCCGCTCTGGCTCTTGCCAAAATGACCTGGCAAGGGGGAGCCTG
GTGAGTGCTCCATAACTGGGAGCCAGAGAATGATATTTGTGCCAGCATAC
CGGCCCTTGCCACCCGGTACATTTGGTGGTGGCAAGGTGGATGGGGAGGG
ACTAAGGGTCCTGCTCTGGCTCTTGCCAAAATGACCTGGCAAGGGGGAGC
CTGGTAAGTGGAAGCCTGTGAATGGCATATTTGTGCCAGCTTCCCACCTT
CCCACCAGGCACATTCAGTGGGGGATGGGAACATTGGGAAGACCTGCTTA
AGGGGGAGCTTGGTGGATGTTCCATGATTGGAAGCCTTGTAGATTAAGAA
CCATTCGTGTCAATACTTTATTGTTACTGCCAATTTGTCATTTNGAAGAA
CAGCTGGGTTTTCACTGTTTTTGTCTGATTTTCGTAGACGGAAATATACG
ATAGTTCTCGTGAAACCAAGGAGGGCAAATACTTGTGTTGGAAATATGTA
CCGCGGCTGCCGNTCCCTTACAATATGTGTAAGTGTTTTCATATTTCTGT
CATTGTCATATTTCGTATCATTTTCCCATTGAAAAGCATTTTGAGAGATG
TCCAGTAATGTATACAAGAATGAATGAAGTGTCTCTGTTTCTTTTCAGAT
GATAAGGGGCAGTTGAAAGATTATGCTCGTGGCACACAACAGGTAGGGCC
TGTTGTCTTCTGTCACTACACGTACATGTAGATGTAGAGACAGGTCTGGC
ATGGACATCGAAGAGAAGATTATCTCCAACCAAGGAGGTTTTATAAAACC
TCCTTGCTCCAACACAACTAAATGTTAAGTAATGTTTTCTTCTGACAACA
GACAATATGTACAGTTTGCAATTGAATGTAATTTCTTAATTATATTTTGC
CCATACTTTAAGTATGGTCAAAATATATTGTTGATGAATGTTTCTACTCT
GCATTGTGATGCTAAATCTTGCGCTCNTGCAGCACTTTGGTAAATGAATT
GCCGATACGAGGCTTGAAATTTTTCGAATCGACTCATGATTGTGGGGAGG
GTGGGNACCAAAGAGGTTTTATAAAACCTCCTTGCTCCAACCACGGGCTT
TAGGCTACGGTATTTATGTTGGGTAACCGCCGCGGTACATGTTTTCGCTC
AAATGCTCCCGAAGACAATTTCTCCCGTCGCTCACTCCGGAAATGCCACC
CCCCCTCATTAGCGGGGATGGTTTCTCCCGTCGTCCTTTGCTAATTACCT
CTTACTTTCAAAGAAACACTGGGTAGGAAATCGGTGTTCTCAAAGAGCGT
TACCACTTGAGGTGATTTCACTGAACGTCGTGGTGTAGCGGACCTTTTCG
GTGCATTGTCGGGTATTTTGGGACTCAACTGACAACTTGAAGAGTTACAG
CATATTAGCAAAAGCTAGACTACACAGCAGTCTGTTTGGATGTGAAGAAC
AGTTGGGTTTTCACTGTTTTTGTCTGATTTTCGTAGACGGAAATATACGA
TAGTTCTCGTGAAACCAAGGAGGGCAAATACTTGTGTTGGAAATATGTAC
CGCGGCTGCCGGCTGCAGCGTTTGTTGCCGCAGTGTTTTGGTACTCGCCG
TTAGGGAGATCATCTTCCACGTTGTATTCTTGTAACTCAGTCTAATGTTA
CAAAGTCCTCCTCAAAGTACCTGAAATCGAAGTCGCTCCACACGAAGTCC
ACACGAAGTCATTATCGCCGGGTCGCACCCAGAAAAACAAAACACTCGGC
GTGGGATGTATGCATATCAGAGTAATTAACACCTTGACGCGACTCACCCG
CTATAATCATAGTACAATGAATACTTGTCCTATCCCCTCTCCTTCTATNA
TGTAATATAATTTTGTGGGTAAAGGTTTGACATGGAAATGATTCAACTCG
CAGTATTCGTATCTACATAGAGGAAATAATAAGAGAATGGGAGAAGACAA
GTGTTAAGTTTCAATTTTGTGCTTAAGTAAAACTCTCAAGATTCAAAGTG
TTATGTTTGCATTTTTGCTCTTAAGTACAAAAATGGTAAGATTGTGAGTG
AATGTGTATGTGTGTGTGTGGAGAGAACCGGTCTGATCTACATACCGTCA
CGGCTTGTGCTATCTAACCAGCCATCACCAGTTTTCTCTCGAATAGAAAG
CTAGGGACTTGATTATGCTGAATTGCAAAGAAAGACCTGTGAGTATCTAT
CAGAGGCATTTCCATACCAAATTTCTGGTCATTTGGTTTAAATATCATGG
TAGCGAAGCCACAAATGTGCATTTTGATTATCAAAAAAGGCCATCCTTGC
ATCTTGCATTTTCAAAAATTGAATTTTGGACTGGTAATCCATTTTTTTCG
GTTGATGTGTCTATGGAATGGTTCATTATGTGTGTGATTGATCACATTTT
GCATGGGGAAGGCGATGATGGGTGAAATATGTTGTATTTGCCCGCAAATG
TTGCCTCTCTAGTTGAGAGTATCCTTTACTAATTTAGAGGTTTTTTGAGG
GGGGGGGGGAGATTAAAGAAGCAAGGCTCAAAACTCATTTTTGGGCCAGT
AGATGCACTGGTGCACCTAAACATAAGAATTTAATAGGTGCACTGTCAGA
AAGAATTTTGGATGCACAA Coding sequence (CDS) from alignment at Sc0000002:5119783..5127951- >BlTCONS00008139 ID=BlTCONS00008139|Name=BlTCONS00008139|organism=Branchiostoma lanceolatum|type=CDS|length=462bp|location=Sequence derived from alignment at Sc0000002:5119783..5127951- (Branchiostoma lanceolatum)
ATCGGTGGGCTCACGTTACCGTTGGGCGAAAAACGTGACAGCATAACCCT
CAAGCCAACCGGCGAAAAACGTGGGAGCATAACCCTCAAACCAACCGGTG
AAGCCACCGCCGCCACAGGTCAGGGGTCAGAGAAGGCGGGCGCGGCGACC
GAGCTGAGTACAAAAGCCGAGCTGTTCCGTTCCCGGCTCATCCATGACTT
TAACATGCTGCATTCCCTCGGGGAGACAGGAGTGTTCACCACTCCGAAGT
ACCACGCTCCAGAACTCATGGACCCAGAAGTGATGAACAAACTGATGGTG
GAGAACCCGAACGCGCTTGTGAAGTTCCAGATCCACGAGCACGTAGACTC
GCTGATGGTGGACCGCACGCTTCGGCGCAAGAACCGCGTACGGAACAAGT
ACTCCAAACTTCCCTCGCTCGACCTCTGGGCTAGCTGGATTCTCGAGAGT
ATCCTTTACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00008139-exon-Sc0000002-1564993656:5127832..5127951 | BlTCONS00008139-exon-Sc0000002-1564993656:5127832..5127951 | Branchiostoma lanceolatum | exon |
| BlTCONS00008139-exon-Sc0000002-1564993656:5127397..5127482 | BlTCONS00008139-exon-Sc0000002-1564993656:5127397..5127482 | Branchiostoma lanceolatum | exon |
| BlTCONS00008139-exon-Sc0000002-1564993656:5127185..5127251 | BlTCONS00008139-exon-Sc0000002-1564993656:5127185..5127251 | Branchiostoma lanceolatum | exon |
| BlTCONS00008139-exon-Sc0000002-1564993656:5124917..5125483 | BlTCONS00008139-exon-Sc0000002-1564993656:5124917..5125483 | Branchiostoma lanceolatum | exon |
| BlTCONS00008139-exon-Sc0000002-1564993656:5119783..5119829 | BlTCONS00008139-exon-Sc0000002-1564993656:5119783..5119829 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:5119783..5127951 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF004065 |
|
