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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000002:5107958..5115097- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00008134 ID=BlTCONS00008134|Name=BlTCONS00008134|organism=Branchiostoma lanceolatum|type=mRNA|length=7140bp|location=Sequence derived from alignment at Sc0000002:5107958..5115097- (Branchiostoma lanceolatum)
AGTATCAGCAGAGCTTCAGGTGAGACATGCAGTGTTCTTGCCAGGCCTTT
TCAGCATTATGAGCGATCCCCGATGCTGTGATCAGGACCCCTGATGCTGT
GATCTGACCCCGATTCTGTGTTTTAATGAGCATAGGGCCTTTTTTAGGGG
AATTTCTTTCTGGGAAGAACCTTCAAAAATCTTATAAAAAGTCCATATTT
GGCTTCAGAATGAGGATTTTACAGAGGAAAAACTTCACTTCCTTAAATGT
ATCCCTCAAAATGCAGGAAATAGTGTCTTATTTGGTTATGAATTTCAAAA
TTTTGTGCGGGAAGATGCCAGACTCCCGACCGTTATCATGTCTTTGGCAC
TCCGTGAGTGACTTACACCGCGCAAAGTTTTCTTCTGTGCCTGACCCCTA
TGCTGTGAAAAAATCCTGGTGAGAACACTGATATGTACAAGTTATGTAGA
GCCCTTGGTCTCTTATCCATTGTAATAATGTACATGTATGATCACATTTT
TACTATGGGAGTTCATCAGCTTTAAGAACTACACACACCAAGGCGAAGGG
GATGGTCCTTGAGTATCAGCAGAGCTTTAGGTGAGACATGTACAGATGAT
GTAGAGCCCTTGGACTCTTATCCATTGTAATAATGTATGATCACATCTTT
ACTATGGGGGTTCATCAGCTTTAAGAACTACACCAAGGCGGAGGGGATGG
TCCTCGAGTATCATCAGAGCTTCAGGTGAGAGATGTCACATGTACAGGTG
ATGCACATTGTTAGTTGAAGTTAAAGTCCTTCCCGCACTGAAGGTGCATA
AGGCGGTGCCCATCTCCGGTTCCACAGCCCTTGGGCCACACACAATTTGT
GCAAGTCACTACAAGGGGCTAGTCCACTGGTAGTGGTGTGTGTTTAACTG
CCATACTCTTTCCCAAATGTGGGGTGCTAAGCAGAGAAAGCAGTATGTAC
CATTTCTTTTAGAGTCTTTTGTATGACCCGGCCGGGGTTTCGAACTCACG
ACCTACCACATGCAAGGCGAACACTCTACCCACTCGGCCATTGCACATTG
TACAGTACCCCAATCTCATCTATTATTTATGCATTGTATTACATTTTATT
TGCAATCTAATTCCTCAAGAACCTTACGTGTTCTCTTCTTTAGATTCCAG
TTCGATCTAGAACATGTTCATTACATTGATCCACATGGATCATTATCAAC
ATCATTTAGCTGTTCCCTTTTTACATCCTATTTACATCATTTTAACCTTC
TCTCCCCTGCCTAACTCTGTAACCAATAGGGAATTGGGGGCCAGACGGCT
ACTTCAGTGTGCTAAAGGTTGAACTCTTTCTAAACCCCAGTTCTATCCAG
AATGTGTTCTACGTCATCCTCTGGATCTTCATAACACATTTATCTGTTCT
ATTCTTTATATTCCAGTTCCATCCAAAATGCGTTCATCACCTTGGTCCAC
ATGGATCATCATCAACACAGCTTCTTTACAAAATGATACAATGCTGAACT
TTCTTCTAAAACCAACCCTTGCCAAACTGTTGTCTAATGTAGCATTAATG
CCAGAAATACAAATGCAGCACTAATGCTTGGTTAGTGTATATTGCCATGG
TAATTTCATGGTAATTATGGCTGTCCAAAATCCAGTCCCTTAATGACTGG
GTGATAAATGATGATTAATGGACAGGGGTGCATGCTGGCATTAATGCTCT
GTTCCAAAGGGAGCAGAGGGAATCCAGCATTAATGCCCAATGTGCTCCGC
TAAGGAGCGCGTAGTGTGGCATCAATGCTACATTAGACAACAGTTTGGCA
AGGGAAGGTATTCACAGATGAAATTTTCAATGACCACTGTCGCCTTCTCC
AGGATCAAACATCTTCTTTATATCTTGTTTTCTTCTTTACATCATCTTCT
CTTCTTAAACCCCAGTTCCATCCAGAATGCCTTCATCACCTTGATCCAGC
TGTTCACGCTGGACCACTGGCACGAGCTGCTGATGGACCTGGTGAAAGTG
GCCAACCCCATCCTGTCTGGGTTCTACGTCATTCTCTGGATCTTCATAAC
ACATTTACCTGTTCTATTCTTTAAATTCAAGCTCCATCCAGAACATGTTC
GTCACATTGATCTACATGGATCATCAACACATTTACCTGTTCTTTACATT
CTGTTCTCTTTTTACATCCTGTTTACATCATTTTAACCTTTTCCCTGCTG
CCTAACTCTGTACTAACCGATTGGGAATTGGGTGCCAGACGGCTACTTCA
GTGTACTAAAAGAACTCTTTCTAAACCCCAGTTCTACCAGAATGTGTTCT
ACGTCATTCTCTAGATCTTCATCAACACATTTATCTATTCTATTCTTTAA
ATTCCAGTTCCATCCAAAATGCATTCATCACCTTGGTCCACATGGATCAT
CATCAACACAGCTTCTTTACAAAATGATACAATGCTGAACTTTCTTCTAA
AACCAAGGTATTCACAGATGAAATTTTCAACGACCACTGTCGCCTTCTCC
AGGATCAAACATCTTCTTTATATCTTGTTTTCTTCTTTACATCATCTTCT
CTTCTTAAACCCCAGTTCAATCCAGAATGCCTTCATCACCTTGATCCAGC
TGTTCACGCTGGACCACTGGCACGAGCTGCTGATGGACTTGGTGAAAGTG
GCCAACCCCATCCTGTCTGGGTTCTACGTCATTCTCTGGATCTTCATTGG
GTCCTTCATCTTCCGCAACATCTTTGTTGGCATCATGGGTCAGTCAAGTT
TCATTCTTTTAATATTTGATGAAATGGTAACACATTTTGTGTGATACTTT
TGGCCATCTCTGGGCCCTACAAAAATGAATTGTATTTTTGTCAAATGTCA
GGAATATTGGCATATCATGTATACTCGATGCACAATTTAAGTAGAATTAT
GAAGTAGTGAATGTATCTGCACTAGAAATAGAAGCAGAAGCAAAAAGTTG
TTTTCTCTTGAAATCTATCATTTACCTGGTTACCTGGAATAGGTTACTTT
AGATAGATGCCATACATTGGGTGTGTGTTGTGTTTTACACCCAAATGTAA
TGTTTACCACTATATGCAGCTCTCATCTATTTTCATTACTCTTTTTTTCT
TGTCCTGTCCAGTGAACAACTTCCAGAACATCCGTAACGACCTTGTTGTG
GAGGTTCAGCAGTACGAGCGAGCCATCCAGGTGGCTGAGATGGAGGAGAA
ACTCAAGCACGAGCTCTCTAACAGGTGAGTACTGATAGATATAATCATGA
TTATGTTGATAGCATAGTAATGGTTTTATTTATTGGTCAGAAATTTCCCG
CAATTGCAGCCTATTAGCGCTGAATTGATGCAGGGTTTTACAGGTTTCAC
ACAATACACAACATATATAATATCTTATCCACACTTGCATTTTGTGGAAC
TGTGGACCCTTGCGACAGTTCCACACTTGCATTTTGTGGCACTGACCCTT
GCGACAGTTCCACACTTGCATTTTGTGGCACTGACCCTTGCAACAGTTCC
ACACTTGCATTTTGTGGAACTGACCCTTGCAACAGTTCCACACTTGCATT
TTGTGGAACTGTGGACCCTTGCGACAGTTCCACACTTGCATTTTGTGGCA
CTGACCCTTGCAACAGTTCCACACTTGCATTTTGTGGAACTGACCCTTGC
AACAGTTCCACACTTGCATTTTGTGGAACTGTGGACCCTTGCGACAGTTC
CACACTTGCATTTTGTGGCACTGACCCTTGCAACAGTTCCACACTTGCAT
TTTGTGGAACTGACCCTTGCAACAGTTCCACACTTGCATTTTGTGGAACT
GTGGACCCTTGCGACAGTTCCACACTTGCATTTTGTGGCACTGACCCTTG
CAACAGTTCCACACTTGCATTTTGTGGAACTGACCCTTGCAACAGTTCCA
CACTTGCATTTTGTGGAACTGTGGACCCTTGCGACAGTTCCACACTTGCA
TTTTGTGGCACTGACCCTTGCAACAGTTCCACACTTGCATTTTGTGGAAC
TGACCCTTGCAACAGTTCCACACTTGCATTTTGTGGAACTGTGGACCCTT
GCGACAGTTCCACACTTGCATTTTGTGGCACTGACCCTTGCAACAGTTCC
ACACTTGCATTTTGTGGAACTGACCCTTGCAACAGTTCCACACTTGCATT
TTGTGGAACTGTGGACCCTTGCGACAGTTCCACACTTGCATTTTGTGGCA
CTGACCCTTGCAACAGTTCCACACTTGCATTTTGTGGAACTGACCCTTGC
AACAGTTCCACACTTGCATTTTGTGGAACTGTCGCAAGGGTCTGGGCTGC
AGGGCCATTCGGCACCACCAGGTGACCTCAATACAACCGAAGTCAGGTAC
CCATTTACACCTGGGTGGAGTGAGGAAAGTCGTGTAGAGTGCCTTTCCCA
AGGGCACAAGATCGGTGACATGACAGGATTCGAACTCGGGACCTCTTGGT
TCCGAGTCGAACGCTCTGCCGTTGCGCCACACGACCCCACCAACATGCAA
CAATGCAACTTGTACTTAATAGACACAATCCAACACTAATCTTGGCATTT
TTGAAGGCACTATTTCGACACTCCAATTGATATGTTACATTGTAGAATGT
TATGTTATAAACTTGATTACTTTCAAGTATCTATCAGTTCATCTAGAGAG
ATAGAGAGATAGAGAGATAGGTGTTCTGTCCCTGTACATTTCAACTTGTA
CACAATGAAGCATTGATTGTTCATTTATTCATTCACACAATTTGTTACTC
ACTCTCTCACACTCACCCATTCCCTCACACATACACATGTACACACACTC
ACTCACTCAACCATTCATTTAATATTCTTCCCTTTCTTGGTTGGATAAAT
GGGCCTTATTTTAGGGTAGTTAATGATATGGAAGTAAGATAATGATCAAT
TTATTGATAGATAATCAATGAGCAGTACTTGTAATCAAAGTTAATGATTT
TGAAACATTTCCTTCCATTTATTCCAGACGTGAGAGCAGACAGAGCCTGA
TCAGTGGACAGGAAGAGAGGTTGGCTTTTCACTTCAATGTCATATTGTTT
AACTAAGAGTACTGGGAATATACTTTTTAACTGCACCAAGAATATGTTTT
TGTGCACATGTGTGTGTCTGTGTGTGTGTTTTTCTGTTTGTGAACACATC
AGTATAACTTAAAAGTCATGGAGGTATCTTTATGATATTTAGTATGGGTT
TTAGATGCTATAGGGGCTTTCAAATTGAAGACATGGCTTAAAATGATGGG
CACTCTGGTGACTTTCCTAGGTACTGCAGCCAAACTTCTGGTTTTGATAT
TTCATATTCCGGACAAGCTATGGCCATGAATTTTGGGTGTATAGAATCTT
GTTTTCTAATTGTTCTTGTTCTTCTGCTTCTGACTCACACCTTATCAAAG
GGGATTGTGCCTTCAAAGCAAAACAATCACTTAGGCCACACCAATTTAAT
TTCTTGGTTAACGCATTTTTATTTTCAAAAAAAAAAAATTTAGAAAAAAA
AAATCATGAAAACAGAAGCATGAATTTTTTTTTTCTAAAATGTTTTTTTT
TTTAGAAAATAAATCCGTTAAACAACAAATTAAATTGGTGTGGCCTTACT
GAATTGTTGTTGTGTAGTAACAGTTTGTATTCTGTTATTGACTAAAATCT
GTTTCCAGTGGAGCACAGGGGGCTAAAAGTACTGAACAGGTTTTGGAGAC
GACAGTCATCACAGAGGTGGTGCCTCCTCCGGGGTCATTTCTCAAGTAAG
TCTCTTTTAAGGAAACGCCTTCCTGACAGAAAAAAAGATAAGAAACTTAT
TTCTGTCTATTGATTTTATCCTTACAAAAAAAGGTGTTATAATAGGATCT
TATTTCTGTTTCTGAGCATCTTGACAGAAAAATAGATGAGAAACTTACTT
AAGCTTCTGTCCCTTGAACATAAATCCCATTATGTTTCATTTTCTCAAAA
ATTTCATGTAAGATATAATTGTTTTCTTTCTCATAATCTTTATACCTTTT
ACCATTTCTTCTGCATCAAAACTTGACACTTTTCTGACAAAAAAAATACT
TTAAGAAACTTACCTTTGTCCCTTGAACATGAATGAATTTATGTTTCCTT
TTCCCAAAAATTTCATGCAAGGTACAATTGTTTACTTTCTCATAATTTGT
GTACCTTTTACCATTTCTAATCTTCATCAAAAATTAACGGAAGTTTTTTT
TTTCCTTCAGTGCTCGCCTAGAGGAGACTGGAAAGCCTTCGAAGAGTGCC
GTCAGGTAAGGGGATGAATTTCAGTAGTTAAACCCCACATGTTGATACAT
AATATACAATGCTATTTACTTAATAACAATGACGTTACCAGAACTCCAGG
ACCCATACTTTTGTTGTGTCAATCGTTGTCCTCATAGTATTGTTGATATT
GTAACATCTTTACATCTTATTCGAAATTCCTTATGTTTCCCTGGAAGTTT
CCTGGACCAAGATGCGGCGAGCATCCAGCGGAACATCAGCGACCACCTGT
TAGAGGCTGAGAGAGCTGACGCAGGTAAGGACAGGGGGAAAGGAAAGAAA
CCTATTAGTAAATTTTATTTCAACCATGGACAATAATGCTCTGTTATTAT
TTGATAGGCTGAGGATCAGAGTTAGGATCAGGTTTCTTATAGGCTATATC
TGAATATGTGGAGAAATGTACACAAACACTAAGCCAAATGTGTATGGCAT
GGTCTTGTTAGAGTGGGACAGAATTGTTCAGGAGAACCGCGTTGTCCTGT
CAGAGACCATCCATGAGACAGTCTGGACGATGGACACCCTGTTTGAATAC
TGCTGACTCATGGAGACTCAGACTTAATCTTATGGTTTATATAGCTAACC
AACGATTGTACAGGAGAACCCTACCATCTGTACATGTATATGTATTATGA
AACAGGCTGGCCGAGGGACACCCTGTTTAAGTACTACCGACTAGTGGACT
CTGAGGCTTAGAATTAACCATTTTGATACCTTAGCTTACTAAATCAAGTT
TTGTGTTTTTGTCAGACTGGGACAGGATTGTTCAGGAGAACATGACAGTC
CTGTCAGATACCATCCATGAGACAGTCTGGCCGAGGGACACCCTGTTTAA
ATACTACAGACTCATGGAGAGACTGCAGGACAACCTGGAG Coding sequence (CDS) from alignment at Sc0000002:5107958..5115097- >BlTCONS00008134 ID=BlTCONS00008134|Name=BlTCONS00008134|organism=Branchiostoma lanceolatum|type=CDS|length=678bp|location=Sequence derived from alignment at Sc0000002:5107958..5115097- (Branchiostoma lanceolatum)
TATCAGCAGAGCTTCAGTTCAATCCAGAATGCCTTCATCACCTTGATCCA
GCTGTTCACGCTGGACCACTGGCACGAGCTGCTGATGGACTTGGTGAAAG
TGGCCAACCCCATCCTGTCTGGGTTCTACGTCATTCTCTGGATCTTCATT
GGGTCCTTCATCTTCCGCAACATCTTTGTTGGCATCATGGTGAACAACTT
CCAGAACATCCGTAACGACCTTGTTGTGGAGGTTCAGCAGTACGAGCGAG
CCATCCAGGTGGCTGAGATGGAGGAGAAACTCAAGCACGAGCTCTCTAAC
AGACGTGAGAGCAGACAGAGCCTGATCAGTGGACAGGAAGAGAGTGGAGC
ACAGGGGGCTAAAAGTACTGAACAGGTTTTGGAGACGACAGTCATCACAG
AGGTGGTGCCTCCTCCGGGGTCATTTCTCAATGCTCGCCTAGAGGAGACT
GGAAAGCCTTCGAAGAGTGCCGTCAGTTTCCTGGACCAAGATGCGGCGAG
CATCCAGCGGAACATCAGCGACCACCTGTTAGAGGCTGAGAGAGCTGACG
CAGACTGGGACAGGATTGTTCAGGAGAACATGACAGTCCTGTCAGATACC
ATCCATGAGACAGTCTGGCCGAGGGACACCCTGTTTAAATACTACAGACT
CATGGAGAGACTGCAGGACAACCTGGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00008134-exon-Sc0000002-1564993656:5115079..5115097 | BlTCONS00008134-exon-Sc0000002-1564993656:5115079..5115097 | Branchiostoma lanceolatum | exon |
| BlTCONS00008134-exon-Sc0000002-1564993656:5112360..5112532 | BlTCONS00008134-exon-Sc0000002-1564993656:5112360..5112532 | Branchiostoma lanceolatum | exon |
| BlTCONS00008134-exon-Sc0000002-1564993656:5111874..5111985 | BlTCONS00008134-exon-Sc0000002-1564993656:5111874..5111985 | Branchiostoma lanceolatum | exon |
| BlTCONS00008134-exon-Sc0000002-1564993656:5110079..5110120 | BlTCONS00008134-exon-Sc0000002-1564993656:5110079..5110120 | Branchiostoma lanceolatum | exon |
| BlTCONS00008134-exon-Sc0000002-1564993656:5109353..5109439 | BlTCONS00008134-exon-Sc0000002-1564993656:5109353..5109439 | Branchiostoma lanceolatum | exon |
| BlTCONS00008134-exon-Sc0000002-1564993656:5108843..5108887 | BlTCONS00008134-exon-Sc0000002-1564993656:5108843..5108887 | Branchiostoma lanceolatum | exon |
| BlTCONS00008134-exon-Sc0000002-1564993656:5108574..5108650 | BlTCONS00008134-exon-Sc0000002-1564993656:5108574..5108650 | Branchiostoma lanceolatum | exon |
| BlTCONS00008134-exon-Sc0000002-1564993656:5107958..5108082 | BlTCONS00008134-exon-Sc0000002-1564993656:5107958..5108082 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:5107958..5115097 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF004065 |
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