TCONS_00009555 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009555
Unique NameTCONS_00009555
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length411

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009555 ID=TCONS_00009555|Name=TCONS_00009555|organism=Clytia hemisphaerica|type=transcript|length=411bp
TACCTGTTAATTATGAAATATATGAAAGATGACTCACCAGTATCACAGGA
TCTTGACCTTGTGTTGAATCAGAAGATGTTCCAACAGGGAAGATATGTTG
ATGCAGCACACTGGTAGGTGATCCACAATATATGCAAATGAACCAGCAGC
AACAATCAATCAATAGAATAAAACAGTAAGATGAACCAATATCAACAGGA
ACAAATGTCAACAGTCTATATCAAATAATAACAGAATCTGTCAGTTACAG
CATTCCTGTTAATACAATATCAATAACAGGATCTGTCTTCCACAGCATCC
ACACATTGCACTATAATCAGGATCTGTCTTCTACAGCATCTAAACAATTA
TGACCAAACAATCACCTCGACCATCACACATCTACTGGATCAGCACCAAC
GGCGATTCTAC
Run BLAST on NCBI

transcript from alignment at sc0000095:430232..430642

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009555 ID=TCONS_00009555|Name=TCONS_00009555|organism=Clytia hemisphaerica|type=transcript|length=411bp|location=Sequence derived from alignment at sc0000095:430232..430642 (Clytia hemisphaerica)
GTAGAATCGCCGTTGGTGCTGATCCAGTAGATGTGTGATGGTCGAGGTGA
TTGTTTGGTCATAATTGTTTAGATGCTGTAGAAGACAGATCCTGATTATA
GTGCAATGTGTGGATGCTGTGGAAGACAGATCCTGTTATTGATATTGTAT
TAACAGGAATGCTGTAACTGACAGATTCTGTTATTATTTGATATAGACTG
TTGACATTTGTTCCTGTTGATATTGGTTCATCTTACTGTTTTATTCTATT
GATTGATTGTTGCTGCTGGTTCATTTGCATATATTGTGGATCACCTACCA
GTGTGCTGCATCAACATATCTTCCCTGTTGGAACATCTTCTGATTCAACA
CAAGGTCAAGATCCTGTGATACTGGTGAGTCATCTTTCATATATTTCATA
ATTAACAGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005337XLOC_005337Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009555-exon-sc0000095-1491911889:430232..430642TCONS_00009555-exon-sc0000095-1491911889:430232..430642Clytia hemisphaericaexon
TCONS_00009555-exon-sc0000095-1510915933:430232..430642TCONS_00009555-exon-sc0000095-1510915933:430232..430642Clytia hemisphaericaexon
TCONS_00009555-exon-sc0000095-1575043694:430232..430642TCONS_00009555-exon-sc0000095-1575043694:430232..430642Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:430232..430642 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.175632	0	0	0	0	0.561486	0.903213	0.422788	2.36803	0.549973	3.02497	1.40364	1.63531	1.33436	0.29919	0.107025	0.527386	0.270277	0	0.195369	0	0.248484	0.201377	0.183081	0.565706	1.51464	0	0	0.194938	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009555 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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