Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009429 ID=TCONS_00009429|Name=TCONS_00009429|organism=Clytia hemisphaerica|type=transcript|length=1283bp
GGCATATAAAAAGAGAGGGACGACGTCTTTTGTAACAGTCAAACATATGT
ATCAATTGAGTTCAcacaagaaaaacaacaaacacagagtagaaaattat
tttcaagcgagaaaaacaaaaaatatggcGAAACGTTTAAGTCTTGATTT
GGGATCCAGATTCAAGAGAAATAGCCTTGACATGACGGATCCAACTCGAT
TAAAGAAAACTAGTCTGGATATGACTGGATCAAGAACTAAAAAGACTAGC
CTTGATTTGGGAGAAAGAACCAAGAAAACTAGCCGCGGTGATTCACCTAT
TGTTCTGACTACTATAACGAACGAACATATTATCCCGCTCGACGTGCTTT
GCGAGAGGCTTGGTACCAACATGGACTCAGGTATGAGTGATAACGACGCA
AAACATAAACTCCGAATAATCGGTAAAAATAAATTCGAACGTCCAAAACG
TCGATTTATGTTCGATTTTAACGGATTTAAAGTACAAAGACAAGACTTTT
CCAAATCTGAATGGAAACGTATTTTCGGACATCAAATACCGGACGAGGTG
ACCGTATACCGGGACTCAAAACGTAAACAAATTTCCGGAAAACATTTAGT
GCGAGGAGACATTATCGAGTTGCAGAAGAACGATATAGTTCCAGCTGATA
TTCGAATCATAGAATCATGTGACGTCATCGTAGACAATAGAATCATAACA
GGAGATTTTCATGAAGTTCGAAATCATAATGACATGTCTAATGATTGTTT
ACGATCGCCTAATATGGTTTTCGCATGCACTCGCATTTTAACTGGGTCTT
GTCTTGGTATTGTTTTGCGGACCGGCGAGGAAACAGTATTTGGAACATTA
AAAAACTTTGCGGAAaaagttaaaattgaaaaagcaaGAAGAAAACATTC
CTTTGAATAGAttattctttttattgttaatttttattgttatttttggt
TGATTTAACCCAACTTTCATGCTTTACTCAAAAACaagtcaaatttttgt
caaCTTCATTTCTAAAATGGCTTAAAAGCATAAGTTTCGAGTCACAACAT
TGCTTCTCAAAATAGATCTTTATCTCAGTTAAAATTGATAGTAATTATAA
ATTACTAAATTATAGGatttaaataataaaaataatttatttttaaatca
aattgtATATATAATAAAATGTAAAGTATTGATATTGAGTATGTATTGTA
GaaattattatgtttttttatcaCAATAATTTATTAAACACTGCCATTGT
AAATGTATCtttcatgaaaataaaaaagtttca Run BLAST on NCBI protein sequence of TCONS_00009429-protein >TCONS_00009429-protein ID=TCONS_00009429-protein|Name=TCONS_00009429-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
AYKKRGTTSFVTVKHMYQLSSHKKNNKHRVENYFQARKTKNMAKRLSLDL
GSRFKRNSLDMTDPTRLKKTSLDMTGSRTKKTSLDLGERTKKTSRGDSPI
VLTTITNEHIIPLDVLCERLGTNMDSGMSDNDAKHKLRIIGKNKFERPKR
RFMFDFNGFKVQRQDFSKSEWKRIFGHQIPDEVTVYRDSKRKQISGKHLV
RGDIIELQKNDIVPADIRIIESCDVIVDNRIITGDFHEVRNHNDMSNDCL
RSPNMVFACTRILTGSCLGIVLRTGEETVFGTLKNFAEKVKIEKARRKHS
FE Run BLAST on NCBI transcript from alignment at sc0000093:383428..384710 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009429 ID=TCONS_00009429|Name=TCONS_00009429|organism=Clytia hemisphaerica|type=transcript|length=1283bp|location=Sequence derived from alignment at sc0000093:383428..384710 (Clytia hemisphaerica)
tgaaacttttttattttcatgaaaGATACATTTACAATGGCAGTGTTTAA
TAAATTATTGtgataaaaaaacataataatttCTACAATACATACTCAAT
ATCAATACTTTACATTTTATTATATATacaatttgatttaaaaataaatt
atttttattatttaaatCCTATAATTTAGTAATTTATAATTACTATCAAT
TTTAACTGAGATAAAGATCTATTTTGAGAAGCAATGTTGTGACTCGAAAC
TTATGCTTTTAAGCCATTTTAGAAATGAAGttgacaaaaatttgacttGT
TTTTGAGTAAAGCATGAAAGTTGGGTTAAATCAaccaaaaataacaataa
aaattaacaataaaaagaataaTCTATTCAAAGGAATGTTTTCTTCttgc
tttttcaattttaactttTTCCGCAAAGTTTTTTAATGTTCCAAATACTG
TTTCCTCGCCGGTCCGCAAAACAATACCAAGACAAGACCCAGTTAAAATG
CGAGTGCATGCGAAAACCATATTAGGCGATCGTAAACAATCATTAGACAT
GTCATTATGATTTCGAACTTCATGAAAATCTCCTGTTATGATTCTATTGT
CTACGATGACGTCACATGATTCTATGATTCGAATATCAGCTGGAACTATA
TCGTTCTTCTGCAACTCGATAATGTCTCCTCGCACTAAATGTTTTCCGGA
AATTTGTTTACGTTTTGAGTCCCGGTATACGGTCACCTCGTCCGGTATTT
GATGTCCGAAAATACGTTTCCATTCAGATTTGGAAAAGTCTTGTCTTTGT
ACTTTAAATCCGTTAAAATCGAACATAAATCGACGTTTTGGACGTTCGAA
TTTATTTTTACCGATTATTCGGAGTTTATGTTTTGCGTCGTTATCACTCA
TACCTGAGTCCATGTTGGTACCAAGCCTCTCGCAAAGCACGTCGAGCGGG
ATAATATGTTCGTTCGTTATAGTAGTCAGAACAATAGGTGAATCACCGCG
GCTAGTTTTCTTGGTTCTTTCTCCCAAATCAAGGCTAGTCTTTTTAGTTC
TTGATCCAGTCATATCCAGACTAGTTTTCTTTAATCGAGTTGGATCCGTC
ATGTCAAGGCTATTTCTCTTGAATCTGGATCCCAAATCAAGACTTAAACG
TTTCgccatattttttgtttttctcgcttgaaaataattttctactctgt
gtttgttgtttttcttgtgTGAACTCAATTGATACATATGTTTGACTGTT
ACAAAAGACGTCGTCCCTCTCTTTTTATATGCC Coding sequence (CDS) from alignment at sc0000093:383428..384710 >TCONS_00009429 ID=TCONS_00009429|Name=TCONS_00009429|organism=Clytia hemisphaerica|type=CDS|length=909bp|location=Sequence derived from alignment at sc0000093:383428..384710 (Clytia hemisphaerica)
CTATTCAAAGGAATGTTTTCTTCttgctttttcaattttaactttTTCCG
CAAAGTTTTTTAATGTTCCAAATACTGTTTCCTCGCCGGTCCGCAAAACA
ATACCAAGACAAGACCCAGTTAAAATGCGAGTGCATGCGAAAACCATATT
AGGCGATCGTAAACAATCATTAGACATGTCATTATGATTTCGAACTTCAT
GAAAATCTCCTGTTATGATTCTATTGTCTACGATGACGTCACATGATTCT
ATGATTCGAATATCAGCTGGAACTATATCGTTCTTCTGCAACTCGATAAT
GTCTCCTCGCACTAAATGTTTTCCGGAAATTTGTTTACGTTTTGAGTCCC
GGTATACGGTCACCTCGTCCGGTATTTGATGTCCGAAAATACGTTTCCAT
TCAGATTTGGAAAAGTCTTGTCTTTGTACTTTAAATCCGTTAAAATCGAA
CATAAATCGACGTTTTGGACGTTCGAATTTATTTTTACCGATTATTCGGA
GTTTATGTTTTGCGTCGTTATCACTCATACCTGAGTCCATGTTGGTACCA
AGCCTCTCGCAAAGCACGTCGAGCGGGATAATATGTTCGTTCGTTATAGT
AGTCAGAACAATAGGTGAATCACCGCGGCTAGTTTTCTTGGTTCTTTCTC
CCAAATCAAGGCTAGTCTTTTTAGTTCTTGATCCAGTCATATCCAGACTA
GTTTTCTTTAATCGAGTTGGATCCGTCATGTCAAGGCTATTTCTCTTGAA
TCTGGATCCCAAATCAAGACTTAAACGTTTCgccatattttttgtttttc
tcgcttgaaaataattttctactctgtgtttgttgtttttcttgtgTGAA
CTCAATTGATACATATGTTTGACTGTTACAAAAGACGTCGTCCCTCTCTT
TTTATATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009429-exon-sc0000093-1491911889:383428..384710 | TCONS_00009429-exon-sc0000093-1491911889:383428..384710 | Clytia hemisphaerica | exon |
| TCONS_00009429-exon-sc0000093-1510915933:383428..384710 | TCONS_00009429-exon-sc0000093-1510915933:383428..384710 | Clytia hemisphaerica | exon |
| TCONS_00009429-exon-sc0000093-1575043694:383428..384710 | TCONS_00009429-exon-sc0000093-1575043694:383428..384710 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093 | supercontig | sc0000093:383428..384710 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004014 | ATPase_P-typ_cation-transptr_N |
| IPR023298 | ATPase_P-typ_TM_dom |
| IPR008250 | ATPase_P-typ_transduc_dom_A |
Blast
The following BLAST results are available for this feature:
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