TCONS_00009240 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009240
Unique NameTCONS_00009240
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1752

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009240 ID=TCONS_00009240|Name=TCONS_00009240|organism=Clytia hemisphaerica|type=transcript|length=1752bp
CGCAATCTTGAATATTTTAAACTGAACGATGGACAAGTTCAACGACCTTG
TATTTTTCACCATCGTTTGTCTTGGATATGCTTTGGTGAAAAGCGAGCAG
CCACCAAATGTGGTTTTCATTGTGGCTGATGATTTGGGTTGGACAGATGT
TGGCTTCCATGGGTCAGATCAAATCCCAACACCGAATATTGATAAATTGG
CAAAAGAAGgaattattttgaataattattaTGTGCAACCAATCTGTTCT
CCAACAAGAAGTGCTCTGATGACTGGAAGATATCCTATTCACACTGGAAT
GTTTCATGGAGTCATTTGTCCAGAGGAGCCCTATGGTGTATCTTTAGAAG
AAAAAATTCTCCCAGAATATCTACGAGAATTGGGGTATGCTACCCATGCC
ATCGGGAAGTGGCACCTTGGATACTTTGCTAAAGAATACACCCCAACAAA
CAGAGGATTCGACACATTTTATGGATACTATTCTGGTTCAGAAGAGTATT
TCAGTCATTCGAGATCGGGAGCTGATTTCGAACATTTCTACGGTTTAGAT
TTACGCCGTGATTATCAAGGAATCAGTGAaCCTGATTGGTCACAAAATGG
AACATACAGCAGCGAATTATTCGCCTCTGAAGCGATAAACATCATCGACG
GACATAAATCAGAACAGCCTCTTTTTCTTTACCTTCCCTTCCAAAACACT
CATGGCCCACTGATGGCTCCTCGAGATTGGATCGATAGATTTTCTTACAT
TGAAGATAAAAAGAGAAGGATTTTTGCTGCAATGGTTGCTACTTTAGATG
AAGCCATCGGAAAAGTTCATCAAGCGTTGGAGGAGAAGGGCATTTTGGAT
AATACAATCATTATCTTTACTTCTGATAATGGTGCCATTTCAACGGAAGG
ATTCTCAAGCAATTATCCTCTGCGAGGTGTAAAACACATGGTGTTCGAAG
GTGCAGTCCGAGTGCCAGCGTTTATCAACAGTCCACTATTGAAAAGATCA
GGTGTTACTTCAATGCAAATGATGCATGTTACTGATTGGTTACCAACTAT
CGTCAACCTTGCTCAagggaaaatcacaaaagaaattgatggttttgatc
agtggaagacattgcaaagtGACGTTGAATCGCCAAGAAAAGAAATCTTG
TTGAATATCGATCACTTCTTTAATCAAGAAGCCCTCATAGCTGGAGAATG
GAAAATTATAGTTGACAGCCTTTATGAGGACGGGCTATACTCTGACGGAT
GGATCAAGGCTCCAGGATACAACGCCACTGGAAAAGCAACATCAGTTATC
AAATGTGGTCCAAAACCTGACAAAACAACACATTGCAATGAAACACATTG
TCTGTTCAATCTACAAAACGATCCTTGTGAATATAATGATGTTTCAAGTC
AATATCCTGAAATTTatcaacaaatgaaaaacaaacttGAAGATTACAAA
AAGGGAATGGNTTGTGAATATAATGATGTTTCAAGTCAATATCCTGAAAT
TTATcgacaaatgaaaaacaaacttgaaaattacaaaaaaagtgtAGCTC
CCAACAGAAACAAGCCAGGAGACAAAATGGCTGACCCAAGATTACATGGG
GGTGTCTGGTCCCCATGGATAAAATTAAACTGAGCtttttttttgaggtt
tttcaTTGATTGATATAGAACAATCTTAAAGgtcttttttaagaaatttt
ttatgCATCTTTTGTACTTTTTAATTGCAATAATGAGACAGCTAAACGCT
TA
Run BLAST on NCBI

transcript from alignment at sc0000091:63128..70842-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009240 ID=TCONS_00009240|Name=TCONS_00009240|organism=Clytia hemisphaerica|type=transcript|length=7715bp|location=Sequence derived from alignment at sc0000091:63128..70842- (Clytia hemisphaerica)
CGCAATCTTGAATATTTTAAACTGAACGATGGACAAGTTCAACGACCTTG
TATTTTTCACCATCGTTTGTCTTGGATATGCTTTGGTGAAAAGCGAGCAG
CCACCAAATGTGGTTTTCATTGTGGCTGATGATTTGGTAAGACGTTTGTC
TTCAATATTTTCTCATTTTCCCTTCAATGCAAACTCAGAAGATGTGATTG
TCATTATGTAACCTAAGGGCGGCTTAAGCAATTTTGGTTTAAAATTTTGA
AATCGATGAAATACCGGGTGCACCACAAAAAAGTTTCTCTCTTTAAAGTG
AATTTTTTTTAGTTTAAAAAATTTTGAAAGAATTAATTTTTTTTCATTGG
AAATAAGAAAAATTAACTTGAATTTTGATGGGTNTTTTTGAAAGAATTAA
TTTTTTTTCATTGGAAATCGACCTATCAAATTAATTAGAAGCATAATTAC
TTAACACGTCAGTATTTTCGTTTCAAGTATTAAAAATGATAATTAGCTGT
GATAATGACATTTCGTTGTATAAAGGTAAGAGTTGAATATCAATAAAAGG
AAGAAAATTCGTCGGAAAATGCCAAAAAATATGGTAAGATTCGTGAAAAT
ACATCAAATATTAGGTTTTGAAGTAAATCCTGCCTAACATTGACTTTACC
TAGTCTAGAAGCAGAGATCTGAGGAAAAGTTCGGTAAAAGTAAATCATAA
TGACTGAGATGACGATTCCAAGCCCTTTCGAGGCTTCAGCTTCAAAATTG
ATGGGTTTGATCACTTAATATTGCTCTTAATCATGTAAAAACTATTGCGA
TTGCCAATTTTGAAATAAAAATTTGATAGGTCAATTTTCAACGTTTTCGA
GCACTTTCTGAAAGTATAATTTTCGATCTAATGAACCGAATTTAATAAAT
GACCCCTCAAAATTTAAGTTTATCTTTCTTCTTTCCANATAACTTTTTTA
TTCAATTGAGCATAAATCTCGATCTAAAGAACCGAATTTAATAAATGACC
CCTCAAAATTTAAGTTTATCTTTCTTCTTTCCAATAAAAAAGGAATGGTT
CTTTTAAAGTTTTTAGACCTTGAGAAAATTAACTTTAAAGAGAGAAACTT
CTTTGTGACGCACCCGGTGTCTGAGTTGTTTTTCCAATATTGTACTATCA
GGGTTGGACAGATGTTGGCTTCCATGGGTCAGATCAAATCCCAACACCGA
ATATTGATAAATTGGCAAAAGAAGGAATTATTTTGAATAATTATTATGTG
CAACCAATCTGTTCTCCAACAAGAAGTGCTCTGATGACTGGAAGATATCC
TATTCACACTGGTTGGTTTAAACCTTATCATTTAAAGTATCAATCAGTAA
ATTTTGACTCAGACTCGACTGCTAAATTTGTATTTATTCACTTAAACTAA
AGAGGGCTTTAAAACCATTGACATTTTAAAAATCTGACGCTAAATTTGTT
TTAAATTTTTTCTTAGTATTTTGGCATAGTGGTCTTACAAAGTTGTACTT
CTGGAAAGGTGAGGTATGTATTCTTTAAAAAGATGACTAATCGACTAATA
GGTTTATAGCTTGGAAAGAAACCTTTCACGATTCACTTATTTTTTAAGGA
ATGTTTCATGGAGTCATTTGTCCAGAGGAGCCCTATGGTGTATCTTTAGA
AGAAAAAATTCTCCCAGAATATCTACGAGAATTGGGGTATGCTACCCATG
CCATCGGGAAGGTTTGTATCTCTTTAACTTTTGTCATTGTAGTTCAGTAA
TTCTCCATTGATCCTACTCCCATCTTACTCCAAAAATATCTTTGGCATCT
TTACCAAAGCCTTTAAAAATTTTTAAAAATCTTTTATTTAGTGGCACCTT
GGCTACTTTGCCAAAGAATACACACCGNTTCCGAAAGAATCTTTTATATC
TTTTACCAAAGCCTTCAAAATTATTACTTTTTATTTAGTGGCACCTTGGA
TACTTTGCTAAAGAATACACCCCAACATACAGAGGATTCGATACATTTTA
CGGATACTACAATGGAGCTGAGGATTATTTTTACCACAACAGATCTGGCT
ATCATTTTCCAAAATTTCATGGTCTTGATCTTCACCATGACGTAGAAGGA
GATCAACAGGTATTCGCTCAATAACCAATAACCATCAGATAGTGACGAGT
TCTTGAAAATTGTTGAAGGAGGCAAAAATCATCAGTCAAAATTAATTAAA
CCTAACGCTTGAGTTACCAGTGCCATAAATGTAATGTCGAAATAACTTTC
AACAATTTTTGTCATACAGCCCTGATAAATACTAACTCAATCTCGCTTCA
AATAGCTTTTGACCAGATTATTTCATGGCGTATTTAACATTTTAGCGTAA
TTCTCCAACTCTAGTTTCATTTTTCATTTTGCCGGTCTATTATTTAGCCA
GTGCGAACACAGGACGGTAATTACAGCACCTACATGTATTCGGATGAAGC
AATCACTACAATCAACCAACATCCAACAGAAAGACCTCTTTTCCTGTACC
TTCCTTTCCAAAATGTCCATGGCCCTCTGATGGCACCTCAAGAAACTATT
GATAAATTTTCATACATCGAAGATAAAAAAAGAAGAGTGTTAGCTGCAAT
GGTATCACAATTAGATGATGCTATCGGTCGAGTAAGTCGAAACTTTTTTT
CAAATTTCCAAATGATATGAAACGAATTTTGGGAATCATATTGCGTTCAT
TGTAAATGTGTTTTGATATTTTTGCCTGGTTTGGCATGATCAAAAACTTT
TCAGTTTTTCATTCAACATTTCATCCAACATTTGAACAAAATGTTGGATG
AAATGTTGGAGTGGTGTGCTCCGGCCTTTAGTCGCCTATATAATACAACA
TTCCAGTAAAAGCTCTTAAATTCAAGCTTTAAACAAGTATGTATGTTACA
TTATTTTCTAGATAAACGGTGCGTTGGAAGCCAAGGGCATTCTAGAAAAC
ACAGTGATCATTTTCACTTCAGATAACGGTGCACCCTCAGGACAAGGGAT
GGGAAGTAACTATCCCCTTAGGGGTGAAAAATTCATGGTCTTTGAAGGTA
TTCAAAAAATTCTTCATTATTTTAGTCTCCACCTTTATATGTCCAATCCA
ACATATAGTACCTGCTAATTATGGTACCTTTTTGTCTTTTTATACAGATT
TATGATTTAACATTTTCGTTTATTTATGGAAAATTTCTAAAGGTGGTGTT
CGAGTGCCAGCGTTTATCAACAGTCCACTTTTGAAAAGATCAGGTGTTAC
TTCAATGCAAATGATGCATGTTACTGATTGGTTACCAACTATTGTCAACC
TTGCTCAAGGGGAAATCACAAAAGAAATTGATGGTTTGGATCAATGGAAG
ACATTGCAAAGTGATGTTGAATCGCCAAGGAAAGAAATCTTGTTGAATAT
CGATAATGTGGAGTTTCGACAAGAAGGTTTGATTTCTGGAGAATGGAAAA
TTATTATCGACAGTGAACATGACAGTAAGCTATTACTTTTTTATCCTAGC
CCTGGATATAAATACTTTTAATGTTGGTCCTGGATTTAGATACTTTTTTG
ATGTTTTAAATGTACGCAAGTCGGGAAAGGGATAATTAAGCAAAAAGAGG
TACATGAATGTGCTACTTGGCCTACCTTCCGTCTCTACCAGTTAGTACCA
GGTAGGATTTCACGAAAATCGCAAAAAAGTGAAAAATCAGTTCCTCGTTC
GGTTGTCTTTTTGGGATTTTAGTCCCTTTGAGCTCACTAATCTGAAAATT
GATAAAATAGACCCTTCGTAGTTTAATTCATTTTATTCATGTGATAAAAA
AGTAACGAGGGAGATACTTACATCTAATATTATATTATTTAGTTTATGCA
TCAGACGGTTGGATCAAAGCCCCAGGATACAATGCCACTGGAAAAGCAAA
AACGGTTGTCAAATGTGGTCATAAACCTGACAAAACAACACATTGCAATG
AAACACATTGTCTGTTCAATCTACAAAACGATCCTTGTGAATATAATGAT
GTTTCAAGTCAATATCCTGAAATTTATCAACAAATGAAAAACAAACTTGA
AGATTACAAAAAGGGAATGGTCCCTAATCGAAACAAGCCAGGAGATGAAA
ATGCAGATCCCAAACTACACAATGGTGTTTGGGGGCCTTGGATCAAGCTT
TGATAACTACTTAAGCTGAATTTGGTAGAATATTGCCTTTTTTGAAAAAT
GTCACGAACACAATTCATTGTTTTTAGCTTTATACTATTTATCTTGTGAT
AGAACGTGTCTCAATCTTTTCAGGTATTTATTGTACTTTTTTGTGGTAAA
TATCTTGACATCTTTTTTATGAATTTTCGTATTTAATTTAACGCATTGTA
AATTTTTATAGGATCTCGAGCATAACACTTTTCATTAAACAGTTTAATTT
TACTATGAATGTCAGCTACTATTGTTACCTCGATTTGGCTAATGTAGGGA
AACTCCCTAATTCTTTGCAGTTTCATTTGACTGTTGAATATAACTTGATT
CATTTTGTTTATCACAGATCTATAAAAGAATAAAACAAATGTAATGTACG
CAATCTTAAATATTCTAAACTGAACGATGGACAAGTTCAACGACCTTGTA
TTTTTTACCATCGTTTATCTTGGATATGCTTTGGGAAAAAGCGAGCAGCC
ACCAAATGTGGTCTTCATTGTGGCTGATGATTTGGTAAGACGTTTGTCTT
CAATATTTTTCCATTTTCCCTTCATTGCAAATTCAGAACATTTGATTGAA
AGGTACAAAGTCATTATGTAGCTTAAGGACTTGAGCAATTTTTTTCCCGA
TATTGTACTTCCAGGGTTGGACAGATGTTGGTTTTCATGGATCAGATCAA
ATCCCAACACCGAACATTGATAAATTGGCAAAAGAAGGAATTATTTTGAA
TAATTATTATGTGCAACCAATCTGTTCTCCAACGAGAAGTGCTTTGATGA
CTGGAAGATATCCTATTCATACTGGTGAGTCAAAACACATTTTTTTTTAC
ACACTAGACAGGTTGACTAACAGATTTCCCGTAAAATCGTGCCAAGTTTT
AAAGTTGACTAGTCCTCCAGGTTTTTCTATTTTACGTCAGACTTTCGAAC
GTCTGATAGGAAATCCGATCTAGTAAATTAGTTAGAGATCAGCGATTCAA
ACATGAGTATTATCAAACAGTACACTTTTGGTCTTTCTGGTAAGGTCGGA
AAATAATTGCATTTAGTTTTCAGCTTGCTGTAAAATAATCTAAACTTATC
GATTGAATTTCTCAATACATTTTTATATTTAGGTATGTACCACAATACAA
TTTATATTGAAGAACCTTGGGGTCTCTCGCTAGAAGAAAAGACTCTCCCA
CAATATTTGAAAGAAATGGGCTATGCTACGCATGCTGTCGGAAAGGTTAA
AATACATAATAATAGTAAAATAAATAAAAAAAGACCAAGCTCGTTTCAAT
CAAACTAGCAAACTAACCTTTGGTTAAAAATCTATGTATTTAAAATTACT
AGTAATAAAAACTTAATCTTTACTTTCCAGTGGCACCTTGGATTCTTCGC
GAAGGAGTACACGCCAACAAACAGAGGATTCGACACATTTTATGGATACT
ATTCTGGTTCAGAAGAGTATTTCAGTCATTCGAGATCGGGAGCTGATTTC
GAACATTTCTACGGTTTAGATTTACGCCGTGATTATCAAGGAATCAGTGA
AGTATAATAATTTTTTTTCGTTCGTTCGTACGTTCGTTCGTTCGGATGTT
GATTATATCAAGCAGTAATTAAGCTATGTATTTAAGAATTTGTATTTGAC
GTGCAATATCAGAATTAAGCTTTCAGTTGTCCATTGTATCTCTTTATAGC
CTGATTGGTCACAAAATGGAACATACAGCAGCGAATTATTCGCCTCTGAA
GCGATAAACATCATCGACGGACATAAATCAGAACAGCCTCTTTTTCTTTA
CCTTCCCTTCCAAAACACTCATGGCCCACTGATGGCTCCTCGAGATTGGA
TCGATAGATTTTCTTACATTGAAGATAAAAAGAGAAGGATTTTTGCTGCA
ATGGTTGCTACTTTAGATGAAGCCATCGGAAAAGTATCTTGATGTTTTTC
TTCACATTTGCATATTATTTAAGGGGTATAGGGTCAAGAAAAAATCAAGT
CATAATTTTTCAGATTTTTGCAATGAATTTTGGTCAGCCTCTTCAAATAA
ATAGCAACTGCATGGACATCTTCTAACCCTCAGCCACATCTTTAAGTTAG
TGTATATGTTTTACACATCCTTACTCAGCAGCACAGATCTCAATCACCGA
GACACTTCCTCATTTATCTAGGTTCATCAAGCGTTGGAGGAGAAGGGCAT
TTTGGATAATACAATCATTATCTTTACTTCTGATAATGGTGCCATTTCAA
CGGAAGGATTCTCAAGCAATTATCCTCTGCGAGGTGTAAAACACATGGTG
TTCGAAGGTATTGTTTTTACATGATATTTTCTCCAAACTGTTTTACAAAG
GCTATTTACTGAAGGTAGTGACGGCCTCGGAGATTGTTTAAAATTTGAAG
AATACAGAACCTTTTGAATTTTACCTAACAGTCTTAATTTATAAATAGTT
TATCTAAAACCAATCTCTGTAAATCCAAGGTGCAGTCCGAGTGCCAGCGT
TTATCAACAGTCCACTATTGAAAAGATCAGGTGTTACTTCAATGCAAATG
ATGCATGTTACTGATTGGTTACCAACTATCGTCAACCTTGCTCAAGGGAA
AATCACAAAAGAAATTGATGGTTTTGATCAGTGGAAGACATTGCAAAGTG
ACGTTGAATCGCCAAGAAAAGAAATCTTGTTGAATATCGATCACTTCTTT
AATCAAGAAGCCCTCATAGCTGGAGAATGGAAAATTATAGTTGACAGCCT
TTATGAGGACGGGCGTAAGAAATTGATTTACATACCTGAAGTTTTACTCA
ATTGTTTTCTGAACCTTATAATATCAACTTTGTTATTTGGAGTCTGGAAA
AGTGATTTTCACCAAAACTAATTCTATAGCATTAAAAGAATTAAAAATAA
AGTGAACGAGTCCATTATTGTTTGTACGCACGATTAGTATTGTCTTTTCA
ATCTTTTTTTTTTGCACGAAAAAAATGTTTTTAAATTAACGATTAGTGCT
CAAAAAAGTAAAACGTGCTTCAACTACAATGTGATTTGTTATCTTTAGTA
TACTCTGACGGATGGATCAAGGCTCCAGGATACAACGCCACTGGAAAAGC
AACATCAGTTATCAAATGTGGTCCAAAACCTGACAAAACAACACATTGCA
ATGAAACACATTGTCTGTTCAATCTACAAAACGATCCTTGTGAATATAAT
GATGTTTCAAGTCAATATCCTGAAATTTATCAACAAATGAAAAACAAACT
TGAAGATTACAAAAAGGGAATGGNTTGTGAATATAATGATGTTTCAAGTC
AATATCCTGAAATTTATCGACAAATGAAAAACAAACTTGAAAATTACAAA
AAAAGTGTAGCTCCCAACAGAAACAAGCCAGGAGACAAAATGGCTGACCC
AAGATTACATGGGGGTGTCTGGTCCCCATGGATAAAATTAAACTGAGCTT
TTTTTTTGAGGTTTTTCATTGATTGATATAGAACAATCTTAAAGGTCTTT
TTTAAGAAATTTTTTATGCATCTTTTGTACTTTTTAATTGCAATAATGAG
ACAGCTAAACGCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005177XLOC_005177Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009240-exon-sc0000091-1575043694:70707..70842TCONS_00009240-exon-sc0000091-1575043694:70707..70842Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1575043694:69532..69691TCONS_00009240-exon-sc0000091-1575043694:69532..69691Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1575043694:69132..69244TCONS_00009240-exon-sc0000091-1575043694:69132..69244Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1575043694:68867..68904TCONS_00009240-exon-sc0000091-1575043694:68867..68904Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1575043694:65142..65274TCONS_00009240-exon-sc0000091-1575043694:65142..65274Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1575043694:64760..64993TCONS_00009240-exon-sc0000091-1575043694:64760..64993Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1575043694:64386..64521TCONS_00009240-exon-sc0000091-1575043694:64386..64521Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1575043694:63929..64213TCONS_00009240-exon-sc0000091-1575043694:63929..64213Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1575043694:63128..63644TCONS_00009240-exon-sc0000091-1575043694:63128..63644Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1510915933:70707..70842TCONS_00009240-exon-sc0000091-1510915933:70707..70842Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1510915933:69532..69691TCONS_00009240-exon-sc0000091-1510915933:69532..69691Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1510915933:69132..69244TCONS_00009240-exon-sc0000091-1510915933:69132..69244Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1510915933:68867..68904TCONS_00009240-exon-sc0000091-1510915933:68867..68904Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1510915933:65142..65274TCONS_00009240-exon-sc0000091-1510915933:65142..65274Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1510915933:64760..64993TCONS_00009240-exon-sc0000091-1510915933:64760..64993Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1510915933:64386..64521TCONS_00009240-exon-sc0000091-1510915933:64386..64521Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1510915933:63929..64213TCONS_00009240-exon-sc0000091-1510915933:63929..64213Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1510915933:63128..63644TCONS_00009240-exon-sc0000091-1510915933:63128..63644Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1491911889:70707..70842TCONS_00009240-exon-sc0000091-1491911889:70707..70842Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1491911889:69532..69691TCONS_00009240-exon-sc0000091-1491911889:69532..69691Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1491911889:69132..69244TCONS_00009240-exon-sc0000091-1491911889:69132..69244Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1491911889:68867..68904TCONS_00009240-exon-sc0000091-1491911889:68867..68904Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1491911889:65142..65274TCONS_00009240-exon-sc0000091-1491911889:65142..65274Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1491911889:64760..64993TCONS_00009240-exon-sc0000091-1491911889:64760..64993Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1491911889:64386..64521TCONS_00009240-exon-sc0000091-1491911889:64386..64521Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1491911889:63929..64213TCONS_00009240-exon-sc0000091-1491911889:63929..64213Clytia hemisphaericaexon
TCONS_00009240-exon-sc0000091-1491911889:63128..63644TCONS_00009240-exon-sc0000091-1491911889:63128..63644Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:63128..70842 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.70058	5.93534	4.08146	2.50476	0.787557	0.677849	1.79711	1.50032	2.30938	2.47399	1.48447	2.85928	2.38202	4.15557	3.66478	3.85793	3.86684	4.31958	2.93751	3.37425	5.06539	6.4324	7.74565	4.25018	4.5213	4.2573	2.82427	4.72083	13.2413	10.7606
Blast
[Close]
BLAST of TCONS_00009240 vs. Swiss-Prot (Human)
Match: ARSJ (Arylsulfatase J OS=Homo sapiens GN=ARSJ PE=2 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.901e-111
Identity = 201/523 (38.43%), Postives = 297/523 (56.79%), Query Frame = 2 
Query:   92 SEQPPNVVFIVADDLGWTDVGFHGSDQIPTPNIDKLAKEGIILNNYYVQPICSPTRSALMTGRYPIHTGMFHGVICPEEPYGVSLEEKILPEYLRELGYATHAIGKWHLGYFAKEYTPTNRGFDTXXXXXXXXXXXXXXXRSGADFEHFYGLDLRRDYQGISEPDWSQNGTYSSELFASEAINIIDGHKSEQPLFLYLPFQNTHGPLMAPRDWIDRFSYIEDKKRRIFAAMVATLDEAIGKVHQALEEKGILDNTIIIFTSDNGAISTEGFSSNYPLRGVKHMVFEGAVRVPAFINSPLLKRSGVTSMQMMHVTDWLPTIVNLAQGKITKEI--DGFDQWKTLQSDVESPRKEILLNIDHFFNQEALIAGEWKI---IVDSLYEDGLYSDGW---IKAPGYNATGKATSVIKCGP----KPDKTTHCNETHCLFNLQNDPCEYNDVSSQYPEIYQQMKNKLEDYKKGMXCEYNDVSSQYPEIYRQMKNKLENYKKSVAPNRNKPGDKMADPRLHGGVWSPWIK 1624
            S   P+++FI+ADD G+ DVG+HGS+ I TP +DKLA EG+ L NYYVQPIC+P+RS  +TG+Y IHTG+ H +I P +P  + L+   LP+ L+E+GY+TH +GKWHLG++ KE  PT RGFDTF+G   GS +Y++H +   D     G DL  +     + D   NG YS++++      I+  H   +P+FLY+ +Q  H PL AP  + + +  I +  RR +AAM++ LDEAI  V  AL+  G  +N+III++SDNG   T G  SN+PLRG K   +EG +R   F++SPLLK  G    +++H+TDW PT+++LA+G+I ++I  DG+D W+T+   + SPR +IL NID  + +     G W     I ++  +  +    W      PGY+      S    GP        T    ++  LFN+  DP E  D+S++Y                             P I +++  +L  + K+  P R  P D  ++PRL+GGVW PW K
Sbjct:   72 STSQPHLIFILADDQGFRDVGYHGSE-IKTPTLDKLAAEGVKLENYYVQPICTPSRSQFITGKYQIHTGLQHSIIRPTQPNCLPLDNATLPQKLKEVGYSTHMVGKWHLGFYRKECMPTRRGFDTFFGSLLGSGDYYTHYK--CDSPGMCGYDLYENDNAAWDYD---NGIYSTQMYTQRVQQILASHNPTKPIFLYIAYQAVHSPLQAPGRYFEHYRSIININRRRYAAMLSCLDEAINNVTLALKTYGFYNNSIIIYSSDNGGQPTAG-GSNWPLRGSKGTYWEGGIRAVGFVHSPLLKNKGTVCKELVHITDWYPTLISLAEGQIDEDIQLDGYDIWETISEGLRSPRVDILHNIDPIYTKAK--NGSWAAGYGIWNTAIQSAIRVQHWKLLTGNPGYSDWVPPQSFSNLGPNRWHNERITLSTGKSVWLFNITADPYERVDLSNRY-----------------------------PGIVKKLLRRLSQFNKTAVPVRYPPKDPRSNPRLNGGVWGPWYK 556
The following BLAST results are available for this feature:
BLAST of TCONS_00009240 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARSJ2.901e-11138.43Arylsulfatase J OS=Homo sapiens GN=ARSJ PE=2 SV=1[more]
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