TCONS_00009151 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009151
Unique NameTCONS_00009151
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1830

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009151 ID=TCONS_00009151|Name=TCONS_00009151|organism=Clytia hemisphaerica|type=transcript|length=1830bp
GTTtatattttttggggaaatgtATAGGATTTAGATCTGTTACCATGACT
ACATCCAAAGAAGACAATAATAAACAAGCAATCATCTATTTATCTTTGAA
TGAAGAACAACTCTTGGCAGAACAAGTTCAAAAACATCCTATCTTGTACA
ACAAATACACAAAAGGACATTTGAGAGACAAAGAtgagttgaaaaatgaa
gcatgGGCGGACGTGGCTGACAATCTTCATTATGTTACAGATGCTACGCA
GGCgcagaaattattttttgtgctAAAGAAGAAGTTTCTACGCAAACGGC
GTGAAGTGAAGGATGCTTACAGAGGCGGATCACAAACAACTATCGCCAAA
GCAGAGAAAGCGTATCGTCAATATGAGTTCCTTCATTGGTTAAGCGAGTA
TCTTCAAGAGCGTGAAACCAGGCGATGCAACACAACATCGTTTTCAAATT
CATGGTCAAACGGAGCTGATAAAAAAGATACAATAAGCGATCATGATGAA
GGTAGTTTGTATGGCCACGACATGGATGAAATACCAACTATGGTTCCCAA
GAGATCCTTGGCCACACCATCCTCTGAAATCTCCACAAATTCTGTCATGA
TTGACACTAAGATAGGAGATTCATTGGATTCGTTTAAATCGTCCACTCAA
ACATCAACCAGTCAACAAAAGCATGGTTCAATCTCACCTACCGGTTCTTA
TAAATATTTCCAAATGTCTGAAATAAGAGAAGGGACGCAAAGGAGTGTAA
AGAATACAGCACCTATTGATGCGGTCAAATTTCGGTCACAGGCAGACACA
ACGCGTCCAGAGCTGTTAGGAGGTCCCTCTTCAACATCAGGAGCTCCACA
AAAAATTCACAGTCCTGGCAACAAGCGAAAGTTAGATTCTCCCCAACAAG
ATAAAGACGAAATCTTTTGTAAAGGACTTGTACTTGATTTGAAAGAACTT
CCACTTTATGAGCGCTTACATGCTAAACAAGAGATGCGGAATGTTCTTTT
TAAATATCAAATTGCCGTCatggaaaaacaacaaaatcaagAGGAAGATC
AAAGATAAAATTTGTTATCGACTCATATGCTTCTTATCGACAGCATCTCA
GACAGGAGACAGACTTTTCATCGATAATGCAGCAGAGGGAGATAGTTTTG
TCCTTTGTTACTTTTAATATCGCAAAATGAACTATTACTGAAATGGGAGG
ATAGAATAACTTtgaggaaatttttattttcgaatCTATCaattcatcat
tttcatcattgtcACCAAAAATAGGTTCTTTGTAATACACTCAGGTGCCT
TAATTACTCTCACTCAGGTACATGACAGACAGCTCACTTATTTTGTCAAT
TTCTCGATTTTGTTCGGCGATAACTTCATTTCTAATAATGCAATCAATGC
CAAATTTTGATTGGAGGACTCAAAATTGTTTTATGTATCTCCTATCTTTA
AAgataatgggccattccatttcatatccatgggggtggacgaacatttc
cagagggtaatctgGGAAATCtttccagggggtgttttttcatctTTCCA
AGGGGTTAAAAAgttattccaaaattttcagGAGGTTTAAGACTAATcct
agttcgtccaccctcattTAAAGGCGGATGAaacgaatttttccaagggt
aatTTTGCCAACTTTACCATTTTACAGGGGGTATCCCcatattttcaatg
attttttttaaacttgaagaTTGGATGATATGTATGAAATATAGTGGCGT
CTCCATAACTGTCAAATACACGGGAATCTCATATTTGttcaaaataagga
aatttcgagttatgaagtaaTGTTTATGAG
Run BLAST on NCBI

protein sequence of TCONS_00009151-protein

>TCONS_00009151-protein ID=TCONS_00009151-protein|Name=TCONS_00009151-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
LYFLGKCIGFRSVTMTTSKEDNNKQAIIYLSLNEEQLLAEQVQKHPILYN
KYTKGHLRDKDELKNEAWADVADNLHYVTDATQAQKLFFVLKKKFLRKRR
EVKDAYRGGSQTTIAKAEKAYRQYEFLHWLSEYLQERETRRCNTTSFSNS
WSNGADKKDTISDHDEGSLYGHDMDEIPTMVPKRSLATPSSEISTNSVMI
DTKIGDSLDSFKSSTQTSTSQQKHGSISPTGSYKYFQMSEIREGTQRSVK
NTAPIDAVKFRSQADTTRPELLGGPSSTSGAPQKIHSPGNKRKLDSPQQD
KDEIFCKGLVLDLKELPLYERLHAKQEMRNVLFKYQIAVMEKQQNQEEDQ
R
Run BLAST on NCBI

transcript from alignment at sc0000090:601845..608252-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009151 ID=TCONS_00009151|Name=TCONS_00009151|organism=Clytia hemisphaerica|type=transcript|length=6408bp|location=Sequence derived from alignment at sc0000090:601845..608252- (Clytia hemisphaerica)
GTTTATATTTTTTGGGGAAATGTATAGGGTAGGTTTTTTTAAATTGCAGA
AATAGTAAAAAAAGGTACCTAGAGTCTGTGTCAAAAAGATGTGCAGTGTT
TTTATTTTTGACCATGACTTCCCTAGCATTTTTCTTTGTCGCATAATAAA
AAGTATGGTATGTGCGGACGATAATAAGGGTCAGTAGGGGGGGGCGTACG
GGTTTGACGGTGTGACGGTATTAGCCCTTTTTTCTGTCGTTGTTTCGGTG
TTTGAAGAAAAAAGTGACGGTATTTCGGTGTCAAACATGCCATGCGGTGA
CAAAATAAGGATTTTACCAAATTTTGCTGTCGGTGTTGACGGTAATCCAA
GAAATATGCGTCGGTATTTCGGTGTCAAACATGCCATGCGGTGACAAAAT
AAGGATTTTACCAAATTTTGCTGTCGGTGTTGACGGTAATCCAAGAAATA
TGCGTCGGTATTTCGGTGTCTGCGACCCCCGTACGCCCCCCTCTCAGTAC
ATTCCAAACAGAAAACGAGCGCATCCATGAAAAAACATCTGTCAGCCCTG
GGTTTACAGAAAACTCAAACCCAGTCCCTCAGTTCGCTGTTTTATGATTC
TGACGATAGCGCTCACACGTAAGACGATTATCTCACGTCCATCAGTAAAA
TCAAAATTGTGATTCAAGTTGCTCTATAGGTAGAAGCTGTAAATGGTTCA
AACTCTCGCTAATCATCAAAGTAAACTCTCGCTAATTCAGTTAGACACTT
ACTATTTGGCCCCTCCACTTTCAAAATTGATTCGCCGGCCCTGTAATTTG
AACTCGGACGGGCTGTCCAATTAGTTCGAATTAAAGACATTAAAGAAAGA
TTTGAACTAAAGAGAGGATTTTACGAGGGTTTCCCTTTGACGGAGGAGAG
GTTGACTAGCTATAGTGCTTTCCCACAAACCAAATTTTTTCTTTGTTTTA
TGGTTACGGAGGGGCTGACGGGACCTGAAAAATTCTGTTCGAATTGTAGA
AAGATTCCGTAGATTTTGGCTGCATTTCCTCGTCGACTCTTTACCTAAAA
ATTTCCGATTTTCAAAAATTCTCTTGGGCAACGAAATAGGTATATAACAA
CACATATTTTTTATAATTTATATCTACAAAATAGATTTAGATCTGTTACC
ATGACTACATCCAAAGAAGACAATAATAAACAAGCAATCATCTATTTATC
TTTGAATGAAGAACAACTCTTGGCAGAACAAGTTCAAAAACATCCTATCT
TGTACAACAAATACACAAAAGGACATTTGAGAGACAAAGATGAGTTGAAA
AATGAAGCATGGGCGGACGTGGCTGACAATCTTCATTATGTTACAGATGG
TAAGAAACTACGCATTTATTAGTGAGGNGTTTGAAGCAAGGAGCCAAACA
CATTCAATGATGTATCCATTATGAGTCTTAAATCCAGTGGAAATCTAGTC
TTTGATGAATCATGGCACTCCATGGCGCCAGAGGCGATCCTGGCTGGAAA
ATCGAGTAAAACTATGCATGATTGACGTTCAACCTGAAGACACGTTTCCC
TAAGATCAACACTGAAATTCAACTGTAAACAGATTTGAGAGAGCACANTA
TCAATTTCGGGATTTAGGGCTTTTTAGGATCCTTTATCCTTCCTGAACAT
ACCCTGAAAATTTCAAGGCCGTAGCATAAATATCTGCCGAAATATTGGGT
TTCTTATGAGCCCTGATATACAATTTTCTCCCTAGCAACGGGAAATCGCA
TCCGTTGCTAGGGCCTCATTTCCGTATGGCTGCTCTAAACATAGCATCAT
GATATACCAAATGAAAGCTCTTTTTACGCCCTTTTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGTTATGTGTC
AATCCATTTTGGTCAACCACAGTAAAAATTTTGTAAAACGGTCTATGTAT
CGCAGAAAAATTGAGAAAAACCTCTATTTTCAACTTTCTGCGTCGTTTTC
TCAAAACACGTTTTAGGGGGTTTTCGCGCACCTTGTCAGCCTTTTCTCAG
GATTGAGAAAAGCTATTGACTTAAAATTTTCAGGGTAGTTTTCCATAGAC
CTTTTCGCCTTTGCGTCCGCCATATTGAATTGTATGCAAAAATTATGGTG
GCCGAATTGCCGTGGTGAAATTTCCTTAGAAAGTATGCAAAACNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNATAAAACTTACATGCATAATTGGCATTATATTAAAGTGTAATCT
TGTAGAAGAAAGATTAAATTTGCTTCTTTTGAAAACTAGAAATAATCAAA
TTCGCCCATCTCTCAGAACAAGCACTTCAAAAAACCATAACATTAGACAT
AAACTCAAACTGAAAAATCACCCGCGAAGGTAAAAAATAATCCTTATTCG
GCTGACGGTAAATTATTCTCCTGGGAATAGAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTTCGGTAAA
TATTTCTTTTTGGATTAAGAAATTCCATCTTTTATTGTTCTAATGATTAT
AAAATTTATTTATAAGATGCTTTGTTGTATTTTTAATCTTTGTGTAAACT
TGCATATGTTTTGCATACTTTCCAACTAAATCCAACCACGGCTTTTTCGT
TCCTATATTTTTGCATACAATTCAAGATGGCGGATGGAAAGGCGAAAAGG
TCTATTATGGCAAGCCCTCAGGATGAATGAAGCAGTTTTTCAACAAAATC
ATTTTTTGACTTTTAAACTGAAAAAGTACAAATTTTAGGTTCCAGACCCC
CTGGCTTGAAATTTTGAAAAAATTTTCCACTCATTCTGGAGACTTTCGTA
ATATTAACCTTCACCAGAAAAAAATTTTTGAATAGCTTTCTTAGCTTTTC
CTAAAAAGGTGACACAATATTTTTATAGCTTGTACCCCCTGGACGATATT
ACCCCCGTCTTTGCTATTTTTAGAATTTTTTTTTAATTTTTCATATCCTT
TATAGTTGTGCTACAATTGTGGAAAGTTTCATTGAAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAATTGTGGAAAGTTTCATTGAAAAATAT
TTACTACTTCACAAGATATAACAAAAAGTTTAAAAAATGACATTTCAAAT
TTCTCATATGACTACCCCCTTAAGTATCGATAGATAAATTACGACGATGG
ACGAATTTTCTCTAGCCTTCATTCACGCCACGGCACTTTTTTACAGGCTG
ACCGGAAAGCAAGCTAGACTTACCCCCACAATGAAATCAACTTTGCATCC
AGAACGAATTTCCGCTTGATTTTCCGTTCTAGAAGCAAAGCAGATATAAT
ACACCGGATAAGTCTAGCTTGCTTTTCGATCAGTCTGTAAAAAAGTGCCG
TGGCGTGAATGAAGGCTAGAGAAAATTCGTCCATCGTCGTGATTTATCTA
TCGATACTTAATCTCACTATTAACTATTCTTTAACTACGAATACCTTGAG
GTATTTTTTAGAGATCCCATAAGTCATATAAGTTGGGCTAAAACGATATC
ACGCGGGAAGAGTAAGTGTAGGAGTTAGTTAATGGTGGGAAGAAATTTAA
TCGGTGGAAGGTCGAAAGCTCATCAGCTCCCTCTCATCAACCTTTTCTCG
TTCTCCTACGCAGCTCTACAGCTTTACAAACGACCACCACCCTTATGTTC
CCGCCCTCTGACATGATTTATTATTAATAGATTAGTTTGGTCTAAGATCC
AAAGAGTAGAGACGAACGAGTTTAAAACATAAAGGGCGGCTATGCAGAAA
TCTTCAACCTTTCTCGAGCAATGAAAAGTGAGGCCTTAAGATTAGCGCCG
TCTTAAAATGATAAATATATAACGCTTTCTTCGTTTTCACGCAGCACATT
TTTCAAAATTTAGCAATGGATTATTAAACTGACGTTTGTGTAAAAACTAC
GCGTGTCATGTGTTTCGAATGGGAAATAAGTGGCTGCATTTCCTTTAGCA
CCTTGGGGCTTTAAACTCGATGTTAAAGACAACTCAACCAATCCTTTTTT
ATTTAACAATCTATATTCACATCCCTGTCTCACTCACATACATCCCTGGA
TATCACTGGGATTACAATGGTTATTCTTTTGTTTGCTTTTCCACAGGGTA
CGAGGGATACCAGTGTAGAGAGGGATTCTGGGTATGGGCTTTCCGGTGCT
ACTTCGCTCCCTGACATTTAGAGAGACTCATTTTTGCTAGAGTTATGTAT
ATTTTCATTTTCATTGTTCAGCTACGCAGGCGCAGAAATTATTTTTTGTG
CTAAAGAAGAAGTTTCTACGCAAACGGCGTGAAGTGAAGGATGCTTACAG
AGGCGGATCACAAACAACTATCGCCAAAGCAGAGAAAGCGTATCGTCAAT
ATGAGTTCCTTCATTGGTTAAGCGAGTATCTTCAAGAGCGTGAAACCAGG
CGATGCAACACAACATCGTTTTCAAATTCATGGTCAAACGGAGCTGATAA
AAAAGATACAATAAGCGATCATGATGAAGGTAGTTTGTATGGCCACGACA
TGGATGAAATACCAACTATGGTTCCCAAGAGATCCTTGGCCACACCATCC
TCTGAAATCTCCACAAATTCTGTCATGATTGACACTAAGATAGGAGATTC
ATTGGATTCGTTTAAATCGTCCACTCAAACATCAACCAGTCAACAAAAGC
ATGGTTCAATCTCACCTACCGGTTCTTATAAATATTTCCAAATGTCTGAA
ATAAGAGAAGGGACGCAAAGGAGTGTAAAGAATACAGCACCTATTGATGC
GGTCAAATTTCGGTCACAGGCAGACACAACGCGTCCAGAGCTGTTAGGAG
GTCCCTCTTCAACATCAGGAGCTCCACAAAAAATTCACAGTCCTGGCAAC
AAGCGAAAGTTAGATTCTCCCCAACAAGATAAAGACGAAATCTTTTGTAA
AGGACTTGTACTTGATTTGAAAGAACTTCCACTTTATGAGCGCTTACATG
CTAAACAAGAGATGCGGAATGTTCTTTTTAAATATCAAATTGCCGTCATG
GAAAAACAACAAAATCAAGAGGAAGATCAAAGATAAAATTTGTTATCGAC
TCATATGCTTCTTATCGACAGCATCTCAGACAGGAGACAGACTTTTCATC
GATAATGCAGCAGAGGGAGATAGTTTTGTCCTTTGTTACTTTTAATATCG
CAAAATGAACTATTACTGAAATGGGAGGATAGAATAACTTTGAGGAAATT
TTTATTTTCGAATCTATCAATTCATCATTTTCATCATTGTCACCAAAAAT
AGGTTCTTTGTAATACACTCAGGTGCCTTAATTACTCTCACTCAGGTACA
TGACAGACAGCTCACTTATTTTGTCAATTTCTCGATTTTGTTCGGCGATA
ACTTCATTTCTAATAATGCAATCAATGCCAAATTTTGATTGGAGGACTCA
AAATTGTTTTATGTATCTCCTATCTTTAAAGATAATGGGCCATTCCATTT
CATATCCATGGGGGTGGACGAACATTTCCAGAGGGTAATCTGGGAAATCT
TTCCAGGGGGTGTTTTTTCATCTTTCCAAGGGGTTAAAAAGTTATTCCAA
AATTTTCAGGAGGTTTAAGACTAATCCTAGTTCGTCCACCCTCATTTAAA
GGCGGATGAAACGAATTTTTCCAAGGGTAATTTTGCCAACTTTACCATTT
TACAGGGGGTATCCCCATATTTTCAATGATTTTTTTTAAACTTGAAGATT
GGATGATATGTATGAAATATAGTGGCGTCTCCATAACTGTCAAATACACG
GGAATCTCATATTTGTTCAAAATAAGGAAATTTCGAGTTATGAAGTAATG
TTTATGAG

Coding sequence (CDS) from alignment at sc0000090:601845..608252-

>TCONS_00009151 ID=TCONS_00009151|Name=TCONS_00009151|organism=Clytia hemisphaerica|type=CDS|length=3168bp|location=Sequence derived from alignment at sc0000090:601845..608252- (Clytia hemisphaerica)
CTACGCAGGCGCAGAAATTATTTTTTGTGCTAAAGAAGAAGTTTCTACGC
AAACGGCGTGAAGTGAAGGATGCTTACAGAGGCGGATCACAAACAACTAT
CGCCAAAGCAGAGAAAGCGTATCGTCAATATGAGTTCCTTCATTGGTTAA
GCGAGTATCTTCAAGAGCGTGAAACCAGGCGATGCAACACAACATCGTTT
TCAAATTCATGGTCAAACGGAGCTGATAAAAAAGATACAATAAGCGATCA
TGATGAAGGTAGTTTGTATGGCCACGACATGGATGAAATACCAACTATGG
TTCCCAAGAGATCCTTGGCCACACCATCCTCTGAAATCTCCACAAATTCT
GTCATGATTGACACTAAGATAGGAGATTCATTGGATTCGTTTAAATCGTC
CACTCAAACATCAACCAGTCAACAAAAGCATGGTTCAATCTCACCTACCG
GTTCTTATAAATATTTCCAAATGTCTGAAATAAGAGAAGGGACGCAAAGG
AGTGTAAAGAATACAGCACCTATTGATGCGGTCAAATTTCGGTCACAGGC
AGACACAACGCGTCCAGAGCTGTTAGGAGGTCCCTCTTCAACATCAGGAG
CTCCACAAAAAATTCACAGTCCTGGCAACAAGCGAAAGTTAGATTCTCCC
CAACAAGATAAAGACGAAATCTTTTGTAAAGGACTTGTACTTGATTTGAA
AGAACTTCCACTTTATGAGCGCTTACATGCTAAACAAGAGATGCGGAATG
TTCTTTTTAAATATCAAATTGCCGTCATGGAAAAACAACAAAATCAAGAG
GAAGATCAAAGATAAATTTAGATCTGTTACCATGACTACATCCAAAGAAG
ACAATAATAAACAAGCAATCATCTATTTATCTTTGAATGAAGAACAACTC
TTGGCAGAACAAGTTCAAAAACATCCTATCTTGTACAACAAATACACAAA
AGGACATTTGAGAGACAAAGATGAGTTGAAAAATGAAGCATGGGCGGACG
TGGCTGACAATCTTCATTATGTTACAGATGTTATATTTTTTGGGGAAATG
TATAGGCTACGCAGGCGCAGAAATTATTTTTTGTGCTAAAGAAGAAGTTT
CTACGCAAACGGCGTGAAGTGAAGGATGCTTACAGAGGCGGATCACAAAC
AACTATCGCCAAAGCAGAGAAAGCGTATCGTCAATATGAGTTCCTTCATT
GGTTAAGCGAGTATCTTCAAGAGCGTGAAACCAGGCGATGCAACACAACA
TCGTTTTCAAATTCATGGTCAAACGGAGCTGATAAAAAAGATACAATAAG
CGATCATGATGAAGGTAGTTTGTATGGCCACGACATGGATGAAATACCAA
CTATGGTTCCCAAGAGATCCTTGGCCACACCATCCTCTGAAATCTCCACA
AATTCTGTCATGATTGACACTAAGATAGGAGATTCATTGGATTCGTTTAA
ATCGTCCACTCAAACATCAACCAGTCAACAAAAGCATGGTTCAATCTCAC
CTACCGGTTCTTATAAATATTTCCAAATGTCTGAAATAAGAGAAGGGACG
CAAAGGAGTGTAAAGAATACAGCACCTATTGATGCGGTCAAATTTCGGTC
ACAGGCAGACACAACGCGTCCAGAGCTGTTAGGAGGTCCCTCTTCAACAT
CAGGAGCTCCACAAAAAATTCACAGTCCTGGCAACAAGCGAAAGTTAGAT
TCTCCCCAACAAGATAAAGACGAAATCTTTTGTAAAGGACTTGTACTTGA
TTTGAAAGAACTTCCACTTTATGAGCGCTTACATGCTAAACAAGAGATGC
GGAATGTTCTTTTTAAATATCAAATTGCCGTCATGGAAAAACAACAAAAT
CAAGAGGAAGATCAAAGATAAATTTAGATCTGTTACCATGACTACATCCA
AAGAAGACAATAATAAACAAGCAATCATCTATTTATCTTTGAATGAAGAA
CAACTCTTGGCAGAACAAGTTCAAAAACATCCTATCTTGTACAACAAATA
CACAAAAGGACATTTGAGAGACAAAGATGAGTTGAAAAATGAAGCATGGG
CGGACGTGGCTGACAATCTTCATTATGTTACAGATGTTATATTTTTTGGG
GAAATGTATAGGCTACGCAGGCGCAGAAATTATTTTTTGTGCTAAAGAAG
AAGTTTCTACGCAAACGGCGTGAAGTGAAGGATGCTTACAGAGGCGGATC
ACAAACAACTATCGCCAAAGCAGAGAAAGCGTATCGTCAATATGAGTTCC
TTCATTGGTTAAGCGAGTATCTTCAAGAGCGTGAAACCAGGCGATGCAAC
ACAACATCGTTTTCAAATTCATGGTCAAACGGAGCTGATAAAAAAGATAC
AATAAGCGATCATGATGAAGGTAGTTTGTATGGCCACGACATGGATGAAA
TACCAACTATGGTTCCCAAGAGATCCTTGGCCACACCATCCTCTGAAATC
TCCACAAATTCTGTCATGATTGACACTAAGATAGGAGATTCATTGGATTC
GTTTAAATCGTCCACTCAAACATCAACCAGTCAACAAAAGCATGGTTCAA
TCTCACCTACCGGTTCTTATAAATATTTCCAAATGTCTGAAATAAGAGAA
GGGACGCAAAGGAGTGTAAAGAATACAGCACCTATTGATGCGGTCAAATT
TCGGTCACAGGCAGACACAACGCGTCCAGAGCTGTTAGGAGGTCCCTCTT
CAACATCAGGAGCTCCACAAAAAATTCACAGTCCTGGCAACAAGCGAAAG
TTAGATTCTCCCCAACAAGATAAAGACGAAATCTTTTGTAAAGGACTTGT
ACTTGATTTGAAAGAACTTCCACTTTATGAGCGCTTACATGCTAAACAAG
AGATGCGGAATGTTCTTTTTAAATATCAAATTGCCGTCATGGAAAAACAA
CAAAATCAAGAGGAAGATCAAAGATAAATTTAGATCTGTTACCATGACTA
CATCCAAAGAAGACAATAATAAACAAGCAATCATCTATTTATCTTTGAAT
GAAGAACAACTCTTGGCAGAACAAGTTCAAAAACATCCTATCTTGTACAA
CAAATACACAAAAGGACATTTGAGAGACAAAGATGAGTTGAAAAATGAAG
CATGGGCGGACGTGGCTGACAATCTTCATTATGTTACAGATGTTATATTT
TTTGGGGAAATGTATAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005126XLOC_005126Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009151-proteinTCONS_00009151-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009151-exon-sc0000090-1575043694:608225..608252TCONS_00009151-exon-sc0000090-1575043694:608225..608252Clytia hemisphaericaexon
TCONS_00009151-exon-sc0000090-1575043694:606904..607118TCONS_00009151-exon-sc0000090-1575043694:606904..607118Clytia hemisphaericaexon
TCONS_00009151-exon-sc0000090-1575043694:601845..603431TCONS_00009151-exon-sc0000090-1575043694:601845..603431Clytia hemisphaericaexon
TCONS_00009151-exon-sc0000090-1510915933:608225..608252TCONS_00009151-exon-sc0000090-1510915933:608225..608252Clytia hemisphaericaexon
TCONS_00009151-exon-sc0000090-1510915933:606904..607118TCONS_00009151-exon-sc0000090-1510915933:606904..607118Clytia hemisphaericaexon
TCONS_00009151-exon-sc0000090-1510915933:601845..603431TCONS_00009151-exon-sc0000090-1510915933:601845..603431Clytia hemisphaericaexon
TCONS_00009151-exon-sc0000090-1491911889:608225..608252TCONS_00009151-exon-sc0000090-1491911889:608225..608252Clytia hemisphaericaexon
TCONS_00009151-exon-sc0000090-1491911889:606904..607118TCONS_00009151-exon-sc0000090-1491911889:606904..607118Clytia hemisphaericaexon
TCONS_00009151-exon-sc0000090-1491911889:601845..603431TCONS_00009151-exon-sc0000090-1491911889:601845..603431Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090supercontigsc0000090:601845..608252 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.6769	3.22274	1.33816	0.945523	6.49329	4.57133	6.69692	7.2706	2.80336	1.80474	3.85824	2.8132	2.28528	2.6605	3.34307	3.29422	3.66389	5.28782	2.39636	2.75108	4.23219	4.39699	4.69477	3.81002	3.54826	3.27159	3.12109	3.07469	2.28346	2.77198
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006578MADF-dom
IPR004210BESS_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009151 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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