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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009170 ID=TCONS_00009170|Name=TCONS_00009170|organism=Clytia hemisphaerica|type=transcript|length=1451bp
cccccccgctaattaatttttcgaaaattgtccacccaggacattcttat
ccCCCCCCCCATATGTGCTTTCGTTTCCATCTTCGATAAATGCATTCTGG
GAAAAACAAATTACAAAAGAATATCAATGGAGATAATTATTTGTCTGTTA
TAATTTTAtccatttcaagaaaattgTATGGCTGTTGCCAAACTAATCTG
GTTCTCGCAGCAGAGTGTCCCCTTGCTCAATATAGACTAACAAGACAAAG
AATaagaatattttgttttgttcaatTTACCATACTTATAAAGTTATGAC
GACATTTCAAATTGTTTAGATGTTATTTAATTTTGACCAGTATAcccctt
ttcataaattacgtcacgaacatcatttgcctcgtattcaaacaattacc
gtgattgtgtcccttgagacattaaatgattcttttatgaataggaagta
gtaaATCCGCTgtgagttaatcaccatggcaataatttcaaaacgaggca
agtgatgttcatgacgtaatttatgaaaaggtctattgtaatgaagaaca
ttttctaaaaatgaaaaatggtattATATTACAGTGAGTATCATAGAAAA
ATTACAAAGGTATAATATAATATTTATGCATTAACATACACATTGGTATA
ACATCCAACATTTATTATATCATTTTGATAATATGGGAATTTTTCGTGTA
ACATTTATttgaaaaagtgaaagtgaGAATACCTCACCAGGATTTACAAA
ATTAAAAGTATTTAAAAGCATAGAAGAATATTTTATTCGAGGGTTTTTTA
GATGCCCTTAGGTCAAagggatttttttgaaataacatATAACAACTTTA
AGgtgtcatttgaaaaaaaactgcatcATATTACATCGACTATCCGATGa
atagttccatttatactgagacggaaaaatcgtctgagacgAGTAGTTTG
TAAATTGTGATCCgtggaggagatcctatttattgaaacatgaatggaaa
gtacactcctccataatgctcattttctaaattgctcgtctcagacaaat
taatcgtctcagtGTAAATAGAACTAATGGTGAATGGCGAATTCTGTTCT
GTATCTTTTCTTCGTTTAATAAAAATGCAACAAGAGTTTTATCTTGTTGC
TGTTTCTTAAttcgattgattgattgattgattgattgattgattgattg
attgattgattgattgattgattgattgattgattgattgatttattgat
ttattgattgattgatttacaTCTACCTTTTTGTATACAAGTTTTGCGTG
TGGAAACATTTTGCTATAGTTttcataaactttttttttctttattatat
atattctatattttttgttctttaTCTCCTATCATGTAAATATCAGTCGG
AAACATTTTGTGTTTTTTGCATAACATAAAATACACGCCTTGTTGATTTT
T Run BLAST on NCBI transcript from alignment at sc0000090:229196..230646 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009170 ID=TCONS_00009170|Name=TCONS_00009170|organism=Clytia hemisphaerica|type=transcript|length=1451bp|location=Sequence derived from alignment at sc0000090:229196..230646 (Clytia hemisphaerica)
AAAAATCAACAAGGCGTGTATTTTATGTTATGCAAAAAACACAAAATGTT
TCCGACTGATATTTACATGATAGGAGAtaaagaacaaaaaatatagaata
tatataataaagaaaaaaaaagtttatgaaAACTATAGCAAAATGTTTCC
ACACGCAAAACTTGTATACAAAAAGGTAGAtgtaaatcaatcaatcaata
aatcaataaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaa
tcaatcaatcaatcaatcaatcaatcaatcaatcaatcgaaTTAAGAAAC
AGCAACAAGATAAAACTCTTGTTGCATTTTTATTAAACGAAGAAAAGATA
CAGAACAGAATTCGCCATTCACCATTAGTTCTATTTACactgagacgatt
aatttgtctgagacgagcaatttagaaaatgagcattatggaggagtgta
ctttccattcatgtttcaataaataggatctcctccacGGATCACAATTT
ACAAACTACTcgtctcagacgatttttccgtctcagtataaatggaacta
ttCATCGGATAGTCGATGTAATATgatgcagttttttttcaaatgacacC
TTAAAGTTGTTATatgttatttcaaaaaaatccctTTGACCTAAGGGCAT
CTAAAAAACCCTCGAATAAAATATTCTTCTATGCTTTTAAATACTTTTAA
TTTTGTAAATCCTGGTGAGGTATTCtcactttcactttttcaaATAAATG
TTACACGAAAAATTCCCATATTATCAAAATGATATAATAAATGTTGGATG
TTATACCAATGTGTATGTTAATGCATAAATATTATATTATACCTTTGTAA
TTTTTCTATGATACTCACTGTAATATaataccatttttcatttttagaaa
atgttcttcattacaatagaccttttcataaattacgtcatgaacatcac
ttgcctcgttttgaaattattgccatggtgattaactcacAGCGGATtta
ctacttcctattcataaaagaatcatttaatgtctcaagggacacaatca
cggtaattgtttgaatacgaggcaaatgatgttcgtgacgtaatttatga
aaaggggTATACTGGTCAAAATTAAATAACATCTAAACAATTTGAAATGT
CGTCATAACTTTATAAGTATGGTAAattgaacaaaacaaaatattcttAT
TCTTTGTCTTGTTAGTCTATATTGAGCAAGGGGACACTCTGCTGCGAGAA
CCAGATTAGTTTGGCAACAGCCATAcaattttcttgaaatggaTAAAATT
ATAACAGACAAATAATTATCTCCATTGATATTCTTTTGTAATTTGTTTTT
CCCAGAATGCATTTATCGAAGATGGAAACGAAAGCACATATGGGGGGGGg
gataagaatgtcctgggtggacaattttcgaaaaattaattagcgggggg
g
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009170-exon-sc0000090-1491911889:229196..230646 | TCONS_00009170-exon-sc0000090-1491911889:229196..230646 | Clytia hemisphaerica | exon |
| TCONS_00009170-exon-sc0000090-1510915933:229196..230646 | TCONS_00009170-exon-sc0000090-1510915933:229196..230646 | Clytia hemisphaerica | exon |
| TCONS_00009170-exon-sc0000090-1575043694:229196..230646 | TCONS_00009170-exon-sc0000090-1575043694:229196..230646 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090 | supercontig | sc0000090:229196..230646 . |
Blast
The following BLAST results are available for this feature:
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