TCONS_00000870 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00000870
Unique Name	TCONS_00000870
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2001

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000005:1163886..1174656-

transcript sequence

>TCONS_00000870 ID=TCONS_00000870|Name=TCONS_00000870|organism=Clytia hemisphaerica|type=transcript|length=2001bp
TNCACGATGAGAAACCAAGAGAAATCCCTGAGAACACGAGACAATTGAAA
CCTGTCACTTTGCAGGGCGAAGGCTGGGGATCAGTGCACTCAACCCAAAT
GGTCTTGAACAACTTGTTTTACTTGACTGTGAAATACGAAGAATATTACA
GCAAAGAGATTGAAGAATGCTGGTCCGCTTTGTGTGCTCGTTGGGAGCAA
AATGTGACGCGTATATTGGATTATTTGATTGTGATGGCTGGTGTATGCGG
CACTCCCGTCTTGATGCATGCGAAGAAAGTAGCAATTTATATTGCACGCG
CTAAAACGGAGAAAACAATTCACGTGTTGACAGAAGAACTCAGACTTACT
GAAATCGTTACCAACTTTTGGGACCGTTTGGACTGTCCACCGTACATTAA
ACCACTGAACAAATGTATAACGCCACCATCCACCGTATCGACAGGTCGTA
AGAATGAAGACTACAAGAAAAACATTACGTCACCTAAGAAACAACCATCG
CTGGACAGTGAATATCCAGAAATGAGAAGCGAGTCGCCCTCTTTTCCTCA
GCAAGCACCCTTCAATAATCGACTAAGTACTGAAAGATCGTCTATCAACT
CTGCAAGGAATTTTGCTGAATCTGtgttagaATCAGTTAAAGCCAGTCAG
ATGGCATCACAAATCGAACAAAAGAAAACGGAGACAGGCTCTTCAGAGTT
ATGGATGTTGAATTGGGTCTTGAAGGCTCATTCAATGCAAGGCGTCGGTC
TCCCATTGCCAATGCCTTACGAGTTACAATATTTTGCGCCAATAACTCAA
GCTTTCCCTTTGGCTTCTCCTCCTGCTCAATTATACAGGTGTAACTTCTC
GTTGATGCTATTGGCAGAGATTGTTTCAGACCAGCGAGATATTTCTTGGA
TATTCTATCTACCGTTGCTTCTTCACGTCGGCTTCCTAGGACTGGATCAT
GCCAAGCCATTGgttcatgaaaattgtaaacgTCTCATCATTAACCTTCT
GGTAGTGTTAGTATGTGATGGTGATCGATCAACCATTGCCAAAGCTCTGA
TGGACTTCCACACTGTCTCCAGTACGGCACTAAATCGTAGTGCAAGTTTG
AAGAACTCCAACGTGAAAACAAGTGCTGATGGTGCTGTACTGGAATCGGA
CGAACTACTCAAAGATGAAGACCGAGAGAACTTGGTTGCACAAGCAGGTG
GTCCAGAACTGGAAGAAAGGGGACTAAGTATCGATGAAAGAGCAAGAGAA
GTCATTGAATATCTCGCCAAAAGCGATTGTAAGCCATTGTGGGCATTTGA
AGACATTACTCCACGAAATGGCACAGTGAAGAGTGCGGACCAACTCGAGT
CATTCCTACAAATCATCGTTCAACTCTTTGATGATGCCCTTCCAAACGCC
CTTCTACCAGGGCGGTGGGCGCGTGAATCTTTACACTGGGCGACGTCGTG
CTCGTCACGCCATTATGCGGGCCGTTCTTTCCAGATTTTCCGTTCGTTGA
AAATTCCCTTATCGTGGCCGATGTTGTCGGATATCTTGCAGCGATTGGTT
GAATCGGTCGCCGACAGCAGTGACGACGTTCAGgGATATTTCATGGAAAT
TCTAATGACATTCTTAGCAGAAGTTGATTATGCATTCAATGACCGTCCAA
AATCGGTTCTGGAACAAATGGACACTATAGCCAGACGTACTAGTAGTTTA
CAAGATTTGAACCCGGCCGAACAGCAAGAGCAGGGACAAGACTTGGTTGC
CGAAAGTATGGACACCCTTAATGCGATCGGGAAGCCTCCTCACAACACAT
CCACTATGATATCGCAGCAACACATACGATCGCATAGTTACGACGTTGAT
CACAGTCACAGTACCAGGCTTCGTGTTCAAGGATTTGAGGGCAAGCGTAA
AGATCGAAGATATGATAGCGAAATGGCATTACAAACACATTCCGTCATGA
ACTCGCCTCTTGCATCTTCTACCACATCAAGCAAAGAATTTAGCGAATTT
C

Run BLAST on NCBI

transcript from alignment at sc0000005:1163886..1174656-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00000870 ID=TCONS_00000870|Name=TCONS_00000870|organism=Clytia hemisphaerica|type=transcript|length=10771bp|location=Sequence derived from alignment at sc0000005:1163886..1174656- (Clytia hemisphaerica)
TNCACGATGAGAAACCAAGAGAAATCCCTGAGAACACGAGACAATTGAAA
CCTGTCACTTTGCAGGGCGAAGGTACTTTCTCTCGGATGCGCCCATCCCA
GGGCATTTCTTATTAAAACCCACAACCTGATCGTTGATTATTATAAAAAT
ATTTTGCAATGTTTTTCTATTTAAGACCTTTCCCAGCTTTTCTGCTCATG
ATTTTCCATATTTCAATTCCCTTTGAAAAATGTTCCATCCCCTGTTTAAA
TTTTGGGTACCCGAGCGTAAAAGTCTAATAATATTAATTGTGAACTAATT
AATCTGTAGTCTCAGTTTTTAGAATACATCCTAATGTTTTCTATAGTACA
GTTCTCCGCCTTGATTCCAAGTCTAAAACATCGTTTGTTATGATATAGGC
TGGGGATCAGTGCACTCAACCCAAATGGTCTTGAACAACTTGTTTTACTT
GACTGTGAAATACGAAGAATATTACAGCAAAGAGATTGAAGAATGCTGGT
CCGCTTTGTGTGCTCGTTGGGAGCAAAATGTGACGCGTATATTGGATTAT
TTGATTGTGATGGCTGGTGTATGCGGCACTCCCGTCTTGATGCATGTAAG
ATAATCACCGTTTTTTGAATAGTAATATAAAGATGATAAAGGCCTTTCTT
TGTAATGGTTTTTGTGGTTAAGCGTGTCTGTTTTAACTTAATTTTTCCTT
TATTAAAACACTAAAAACAGGGGCATAAATACGAGCCTAAATTGCAGAAT
ACTTCTAAACATAGATATAGTCCCCCCCCCCCCCGCTAGGAACTAGAATT
GATATTATTATGAGCGTTTTAAATTAAATATCCCCGCTCAAAAGTCCATT
AAAGTTTTCACTTGTCAGAATTTTATGTGGGACTAAAACCAGTGACCAAT
GTCACGCAGACTTTACTCCATTCCAATAATGATCCATTTAACTATTTTTC
ACATGTTTAGGCGAAGAAAGTAGCAATTTATATTGCACGCGCTAAAACGG
AGAAAACAATTCACGTGTTGACAGAAGAACTCAGAGTAAGACGATTTTCT
TTTTAGATTTTCGGTGCATTATTCCTTTTCCTGATGATAGATCGTAAATT
TATTTTGTTGTGTTTCTGGCTTTCAATCCAATTTCAATATGACAACCTCT
TTCGCTGTCCACTATTTTCCATTCGCCATTTCTGTTGTATCGTCCATCAC
AAGCGTAACATATTAACTGTTAGAATATTTGGAACTATCCGACGATAAGT
CACGCCTTTACAGGATCTGAAACCGAACCAAAATGTTCGAACTTTTCGTT
CCGATTAAAAGAAAATTCATGATTCGGGTATTTTCGGTTACCGCACTTTG
AAAAAGGCGAAAGCAATTTATTTTGGTTAAAGGGGAAACTACTTACAGTA
ATTTGAGATCTACGAACGTCTCTATTATAATATTACGCCCCTTGCTTGCT
GGGAAATAGGTTAGTCCAACTGATAATCTTCTTTCACTTCTTTATTCAGC
TTACTGAAATCGTTACCAACTTTTGGGACCGTTTGGACTGTCCACCGTAC
ATTAAACCACTGAACAAATGTATAACGCCACCATCCACCGTATCGACAGG
TCGTAAGAATGAAGACTACAAGAAAAACATTACGTCACCTAAGAAACAAC
CATCGCTGGACAGTGAATATCCAGAAATGAGAAGCGAGTCGCCCTCTTTT
CCTCAGCAAGCACCCTTCAATAATCGACTAAGTACTGAAAGATCGTCTAT
CAACTCTGCAAGGAATTTTGCTGAATCTGGTAAGGATAAGGTTATTCTAA
GAATTTTATTTGACAATTCATTCCAGAAAAGAATTTTCAAGGTGGTTAGG
GAGTCAAGGGCACTCTTTAGAACCTCCTAATAAAGACTCCTTATTTTAGA
TACTTTGTGTAACGTTCTCCGCCCCCGTTCGTTTGACATAGTTCAATTTT
TATCGCTTTTGGATTTGCAACTACTTAGCCTTATCTATTTTTATTTAACG
ATGTTTAGTTTAGGGTTATGTTTGTTTACTTTTAGTCCTTTTAGACTTCA
GAGGTGTTTTTACGTAACCAAGCCTTCCCCACGGGTTAATTAGTGGTGCA
GTAGCTTCAACATACAAGCTTCTAGAGTTAATTGTGCTATCGTCCCTCAA
ATAACACAAACTATTTCTTTTTAGTGTTGGAATCAGTTAAAGCCAGTCAG
ATGGCATCACAAATCGAANAAACTATTTCTTTTTAGTGTTAGAATCAGTT
AAAGCCAGTCAGATGGCATCACAAATCGAACAAAAGAAAACGGAGACAGG
CTCTTCAGAGTTATGGATGTTGAATTGGGTCTTGAAGGCTCATTCAATGC
AAGGCGTCGGTCTCCCATTGCCAATGCCTTACGAGTTACAATATTTTGCG
CCAATAACTCAAGCTTTCCCTTTGGCTTCTCCTCCTGCTCAATTATACAG
GTAGGCATTTTATGCATGTTAATAGATCAGGCCAAACCAATAAGTTTCTC
TTGCAAATTAGAAAAAACAGTTGGCTTTTGCTGCAGTTTGCTGTAGTTTT
CTTCCTGCGGACTAAGCTTGATCAAAAATTTTGAAGTACAGGTCCCAATA
TAATTTTGAGTATAAACACGATTTTACCATACCTTGCTTGATTCACTTTT
TCCAGGTGTAACTTCTCGTTGATGCTATTGGCAGAGATTGTTTCAGACCA
GCGAGATATTTCTTGGATATTCTATCTACCGTTGCTTCTTCACGTCGGCT
TCCTAGGTATGGAACAATGTAAACATACCCTTTTGCAGTTAGTAGACCTC
TTCCTGGGAATCTCGATCGAATTGTATTGGATATAAACGAAGACATACGA
ATGAACTTTCCCCTTAGCTTTTTCCACTGAATTATATCCTAGTGAGTAAT
TAATTTCTCTCTCCTCCTTAAATTGTAAACCTTTTTTGCTACACTATTTT
ACATAGTTTAAACCAAGATTTTTAATGTTCTTGTCTTTTATCAATAGGAC
TGGATCATGCCAAGCCATTGGTTCATGAAAATTGTAAACGTCTCATCATT
AACCTTCTGGTAGTGTTAGTATGTGATGGTGATCGATCAACCATTGCCAA
AGCTCTGATGGACTTCCACACTGTCTCCAGTACGGCACTAAATCGTAGTG
CAAGTTTGAAGAACTCCAACGTGAAAACAAGTGCTGATGGTGCTGTACTG
GAATCGGACGAACTACTCAAAGATGAAGAGTAAGAAAAAGAAACCTTTCT
GTAAAACAGTAGTTCGTTCAAAAATTAAACCTATCAAAAGAAAGTTATGA
AATAGTAATTCTTGGCTGACTTTTTATAAGAATCACTATGGTGATTGAAA
GACCAAGTCCCGAATTTTTCAAACACAAACATTGTTTCTTTGGGGCAATT
CTGTGGTGATGAAGAAGATAGACCTAAGAACCAATATGCCTAACCGTGAT
CTCAACATCATTACCATGATGGCAATCCTGAATTACTTTTGGAAAGCTAA
GAACAAATCATACACAGATTTGAAATATTATGTTTCAATAAACTTCATTA
TAGACCTTATTCCCTTTATTCTTTTCAGCCGAGAGAACTTGGTTGCACAA
GCAGGTGGTCCAGAACTGGAAGAAAGGGGACTAAGTATCGATGAAAGAGC
AAGAGAAGTCATTGAATATCTCGCCAAAAGGTCAGTCTCGTTTTTAACGG
CGAATTATCTTTCACGCCAAAGCAGATTTAAAGCGGTTTTAAGTGAAACA
ATGAAAAATTTGAATTTCATTTGAAATGGTTTCCAAGAACTAACTAATTC
TCCGACTAGGAGACCGGGAAAATGCTCAAAAAGCACTTCAATTAACTATT
CTTATAAAGTAGGGTTTTTTCAATTGTCAAGTGCGAATTTCTGAAGTTGA
ATAATTTATATTTTCATTTATTTTCCGTTCTCAGCGATTGTAAGCCATTG
TGGGCATTTGAAGACATTACTCCACGAAATGGCACAGTGAAGAGTGCGGA
CCAACTCGAGTCATTCCTACAAATCATCGTTCAACTCTTTGATGATGCCC
TTCCAAACGCCCTTCTACCAGGGCGGTGGGCGCGTGAATCTTTACACTGG
GCGACGTCGTGCTCGTCACGCCATTATGCGGGCCGTTCTTTCCAGATTTT
CCGTTCGTTGAAAATTCCCTTATCGTGGCCGATGTTGTCGGATATCTTGC
AGCGATTGGTTGAATCGGTCGCCGACAGCAGTGACGACGTTCAGGTAGGA
AAAAATTGTTAACAAAAAAATAAAATTCGGATTTATTTTGAAGCCATTTT
TCAAAATTTAAAATTTAAAAACAGTCAAGCGATATATTTCGGTTGTATCG
CCATTCTCAAGCTTATAAAAATGTTCTAAAAGTGTTCTATCAAAAGTGGA
ATTTGTTTTTTTTTCTACGACGACAACAACGACGACGACTGGGAATTGGA
TTTTATTTTTTCTCCAAAATTTGAGTTTTAGTGTTCTTATAAACTGGGTT
CTAAATGAAAAAGTGTGTACAGTCTATAATAGGGAAAATTTGACGTGAAA
GTCAAAGGAATGCATTTTAGTAGTTTTTTACCAATAAACTGTTTGAACGG
TCGATTTTTTATTGACTCGAACACTGAGGTTTTCTTTTATGAATTGTACA
TCAAGAAAACATTTTTCCTGTCTTTCTTTTCCATTGACTACAGATTTATT
TCCCTTCCGATATTTTGATGAGCATTTTTTTGTGTTCTTAAAACACAAGT
TTAGATCCTTTTTTATGATTTTTCGTTTCAAGATCTTTGGCGGGTTGATT
TAACCCTATTATTATCAAGCTATTTGGGAGTTCGTATTTTGAAAAATACC
CTTTACTAAAACGGCTTAATGTTGAGTGGATAAACATTTTTCTGAAAGCA
AAAAGAATTTAAAAAAAATGAGAAAATCTTTTTTAAAATGAATTTTGGAT
ACTTTTTTGAAACGTCACATTGATATCTAAAACCTGTTAAAATTTGAAGT
TAGTTTGATAAATGTATCAAAATTTATGCCTGCATTAAAAAGTCATAACA
GTGATCTACTGGACATAAAATTTGGTGTATTTTTTTCTAACAAAAGACAG
AATCTTTCAGGATGTTTATACTATTTTCAGTGATTTATCAGCTAAATAAT
GCGAAAGTGCTTAAAACACTTCTATGATAAAAATAGTTTAGGGGGTCATA
TTCCATTAATTTTGAATTTCTGGACGATGCAACATGTCCGAAACATTGAA
ACATTTGCGAATACATTAAAAAAAAAACATTTATGAAGACACTTAAAAAC
CGAGCTTAAATGCTAAAAAATTTAGGACTCCCAGGGACTCCACACGGGGC
TGAAAATGAAACTGTTTGAGCATTGACTTGTTATTTCAAAAAAATATTGA
TTATATTTTAAATTTCAATACGGTTAATGTATTTTGATTATCATTCGGCG
ACGCAAAAAAATCTTAAGTTCATTTGAATGTTCGTTAAAGCTTTATAGCG
AGTGCAAGTCACGATATTCATTTTCAGAGAGCCTTTTTGGAATTATTCCT
ATTTTAAAGAAATCGACCCCATGGAAAACAACTTTTCTTTTACCTTTGAT
GAGCAAGTTCCTTTGGATAAAAAAAGTGGTATTTTTCATTCGTTATGATA
GCAAGAAAACTCCGCATTAATTCTCTTAATATATTGGATGGGCAGCTGAT
TTTTTCACTAAGTTTTTGATTGGTTCTTTCTCGTGTCTAGGCTACGTTGT
ATATTCCTTCGTTTCGAGCGTAAAACTCCTACTCTTCGGGATATGAGCAC
TGCTCTTGTTTTGAATATTGAAATTTTCCGGATAAATCGCATGCGCACTG
AGGTTTTAATGAAACAATAGAAAGTTTCGAAACCTAAGCCAATCAGCTGT
GTTTTAAACATTCTTTTATTTGAAATCACTATTGATAAACATCTTTTGTG
AAAGTTGTCTATTATGTTTAAACCTATTAATAAGAAATTCCCGGTGGGGT
TACTAGTGGCCGCCTATAGCAGTGCCTATAGACCAAGGGTAAGGTCTAAA
AGCCTGGAGCTGTCTATTGTGTAGACTATCTCGTGTCATGATAATGTTTC
TTATCATGGTTGAAAAGTCTTTCCCCATTTCATTTTAGATCAGTCTTTAA
AGTTCTTTTATACTAGAACAGGCAGAAAATGAATAACACGGGATTTTTAA
AACCTTCGGATGAAACTGCCGATCGAATCAAAGTACAAAGGGAGTCGCTT
GAAGTTTACCTTGTTATTCTCTTGGTCACACTCTTGGTAACACTCCTTTT
ACACGTGTTCGTCCAGTTCTGCATCCATAAGGCCCGTCTACACAATAACA
ATTATTACCTAATCCGTAGTCTCTCCTTGGCTGATTCGTCGACTGTTATT
CTTTCCATATTTTTGTGTCTACTTGCAATAATGAGGGTCGATTTTGAATA
TAAAGGAGTAAAGATGTTTCTATCAGTTTTAATGTTTGGCTCGTTCACGA
CTTCCTTACTGATTACAATAATGATCGTCTCTGATCGATGGATCGCCATG
CAATACGCCTTACGATACAACACTATTGTCACCAAACAAAGGATCGCACG
TTTGATATTTCTGTCAAGTTTTCTATCTGTTGCTATCCTTTTTTTTTTAT
TGACACCACCTCCAATGGGTGGGTTCCAGAATAACCAAAATCTCTTTGTC
AATCCATACGTTGCAATATTCTCCGCCATCTCCAGAATAATAACTTGTAT
CGTCATCCTCGTCATGGCCGCACTAACTATCCGAATTCGAAATCGCAATC
AAGCTCACATTCAAAACATTGTTAATTTTCACGGTAACGAAGCTGAAAGA
TTGCATACGATTCAAAGACTAACCAGAAGCATAAAAGATGTCTTGAAATT
AAATATATGGACTTGTGTGTTTCTTGTTCCGCTGAGTATTTTATCTATAC
TGAGGGCGTTTCATAGTTTCCAAACACAAGAATTTGGTGTATTGGTCGCC
TTTTTCAATTTAAATCTCATTTCGAACCCGATTGTCTATCTGACCTGTTT
CACACAGATACGTAAATATTGGTACCGTGCTTTATTTGTTAGAAATACTA
TAGACATCCAGGCAAATTGATGACACTAATTGACACTGCAGTTATATGAT
AATTAGAGATTTTATCTAGCCAAGAACAGAGACTAGGTAATGTAATGAGG
GATAGAACCATCCCTACGTGGAATAAATTGCCGTCTGAGATGGTAGCTGC
TGATTTCATAAAAGGCTTCAAAGAAAAGTTGAAAGAAGCATCCAAAGAAG
TTCGATACACGAAATTTGTAAAGTGAGATTGGTTTAGAGGCCACTGAGTT
CCTACAACCTGTAAAACATTCTTAGTTACCATATTTAACAGTTTTAATTT
AATCGTTGCTAAATCTTAATTGGCCACCCAAAACATGTTAGTTTTCCTTC
AACGGCTTAAAATTTATAAAACAAAATTTGAAAGGATTTGGTTTTTGGTG
ATATATATTTTTTTGAACCTGTCTCCATGCATGCCTCGCATTATTAGCCC
TTTAACTGCCGTTCGTTTTTTTTAAGGTTCGACCATATTTGACAGATGTC
GGCATATGCCGACAAGAGCGACCACAAAGCTTACCATCACATTTAGCTTT
ATTTTCTGAAAAATATCAGAAATGTAATATATATGTTTACTTTGAGTTGA
AATATGTAGAATTATGAAAAACATCTTTGAAATTTATTTTAATTATTTAA
CGGCTATTTAATGAAATCTAGTTCAAAATCAAATTTTCAATAAACTTAAA
AAAAACTCTGGCAAATAGGTCGAGATCTCTCTTGTCGGTATACGCCGACA
GCGGCACTGAAAGGGTTAGGAAACTGAATGAAGATTTTCGAAGAAGATAT
GAAGATATCAACCTTATAGGCTTTTTTACTAGGATTTTTTCCCCTTTTTA
GTTTTTATTTCGAAGGGTGCCACCCCGCGCGCCCCCTTTAACAATTATTT
GAGGGATTCGAACTAACATTTATGTTGGGCCCTCGCTTGTATTAATTTTA
TTGAGAGTTGATGTAAACAGAGTGTGAGTAAGAAAGGATTACTTTGTTTT
AGCTCATATAAATTTCACGTAAATCGGTTTCTTTTCAAGGCCATTCATAA
TACAATAATGACCGGTTAGTGAGGGCTGTACTGAGAAATATTGCCCGGGG
TCTAGTAACGACCGAGCTTGCGAGTTTTCATTCAGAAAAAATAATGACTT
TTACATTACCTTAATTTTGATCTTAGGCGACTTGGATTCGAAATTTTCTA
GGTTCTACTTTAAAATAAAAAACGACATTATACTTTGCTAACATAGTACT
GTATAAGATTACCGTTAAATCAGGGGGGGGATCGGTAGTAAAATATCAGA
CATATATGAGTAGTAAAAGGATTTTTACGAATTTTTTTACATACCACCAC
CCAGACTCTTGGAAGAGGTATTTTTGGGACAGTTTTTGGGACAATTTGTC
ATGGAGACCACCTATTTTTTGGTTACTTTTCGGACTGATTTTACAAAAAA
AAACTAAAAAATGATTATTTCTGTGACCTGTGACACATTTTTCACTTTGT
GCAAAAATTAATGTTTTGCCCTTAGAATTAAAGTCTTTTTTATATTGACA
AAAAATTTCGAGAATTTTTCTTTTGCAGCAAACAACATTCCAACAGAAAA
TTTTTTCAAATTATAAAAATTTTCAGATTTTTTCAGAAAAGTCATGCAAA
AAATTAAAAGAATTACAAAAATAGCTAAAATTTGCTAATTTTATCAGTTT
TAACTACCCAGGTAGTAAATTCTTTCAACATTTAACACATAGTTACCACC
CATTTTAGTATTTAACTACCCTGGGTAGTAAAGATTTTTTTCGATTTTTC
GTCACACCACCACCGTAGTAAACGTCATTATGTCTGAGATTTTACTACCG
ACCCCCCTGGTTAAATCAAAGTTTCTTTATGAGTGATGATAAGTTTAAAA
GTTATTTGTTAACTTTAGCCTCTAGTTGACAGGGTTCAATACCAAACAAT
AAAATATATTCTGAAATTTTGAACCCACATAAGACTTGCGACGGTACTGC
ATAGTAGCCCTTTTATTTATGTAAAAATAGTCGATATCTATGGAAATTTC
GAAATCCATTGCCGTACGCCACGTTATACGTGAAATTTGCCTTTTTATTG
CCTGGGGTGTTTGACCTAAATGAAGGTTCCATCTCTTTACCAGATGTCTT
CATATGCCGACATGAACAAGCGCTGGTAATGTATACCATCACTTTCAGTT
ATATAAGATTCTCTAAAAAATCTAGTTTAAAATCAAACTGTCAACCATTA
AGAAAAACTGGCAGTAGAGTGAAATCTCTCATGTCGGCAAATGCCGTCAT
GGAAACCGCTCATGTCGGCNATCTAGTTTAAAATCAAACTGTCAACCATT
AAGAAAAACTGGCAGTAGAGTGAAATCTCTCATGTCGGTATAGGTACGAA
AAGGGTCAGGAAAACATCTCTCCCATAATTTTAAGGTATTTGGTCAAAAA
TTTCGAAATATTGAGTTTATGTATTCGAGATAAATCGAAGGAGACGGTAT
AAAGCAAAGTTGACATGTCTCCAAAATCGCCCTCCACTTTGCTCAAAACG
GTAAAAACACCAAAATACCGTCGTCTGTTTAGGTAAGCAAAGGCAATGTA
GACTTTGTTTTGCGTTGACTTCACTTACCGTCACCCTCGATATCCTCCGA
TATATAAACTCACTAATGTAGGTCAATACGATTGTTTCTTTTCATCCGTC
TTGACTGTAATTGACATCATATTCACCTTTTTGTCTTTTTCAGGGATATT
TCATGGAAATTCTAATGACATTCTTAGCAGAAGTTGATTATGCATTCAAT
GACCGTCCAAAATCGGTTCTGGAACAAATGGACACTATAGCCAGACGTAC
TAGTAGTTTACAAGATTTGAACCCGGCCGAACAGCAAGAGCAGGGACAAG
ACTTGGTTGCCGAAAGTATGGACACCCTTAATGCGATCGGGAAGCCTCCT
CACAACACATCCACTATGATATCGCAGCAACACATACGATCGCATAGTTA
CGACGTTGATCACAGTCACAGTACCAGGCTTCGTGTTCAAGGATTTGAGG
GCAAGCGTAAAGATCGAAGGTGAGTCCCGATTTAGTTGTTGATTTAGAGT
CCGTTTCCATTTCGGTCTTATATCTGAGGTCTTTAGGGTTCATTTGGACA
GCATACTTAAAATGTCAAACAGCTAGGTTAAAATCATAAAGTCGAAGAAC
CACCCAGTTGCCCTAAGCGAACCCTAAATCTTGACTGACCCTTCCAAGTC
CGCACTATTTCGAAACTGGAAAGTTTTGTTTAGAAATTGTTTCTTCAATT
AGGGAGTCGCAGAGATCCGGCTTGCACTAGCCCGCTTATTTCGAAGCCCA
GCTTTAGGTTAATACTGAAATACTGGGTTGAGGATTGATATGGATATAAA
CTTTTTATCTAATGATAAATCAAACGTTCGAATTCAAAAAGGTGAAGGCC
TACTTGAATCAAATATTTGCTTCCATAATAGCGAAACTTAAAGGTAATTT
TTTAGACAAACTGAAAAATCTCTAGAGCTGGGTCATGGCGTAATGCTTAT
AATAATATGTAGCTCCATTTTCTTCTTAGATATGATAGCGAAATGGCATT
ACAAACACATTCCGTCATGAACTCGCCTCTTGCATCTTCTACCACATCAA
GCAAAGAATTTAGCGAATTTC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_000515	XLOC_000515	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000005	supercontig	sc0000005:1163886..1174656 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.113376	0.00968875	0	0	0.000739623	0.00552356	0.00325063	0.00132871	0	0	1.022e-09	0.0168458	0.185099	0.0359895	0	0	0	0.0391956	0	0	0.0506611	0.551836	0	0	0	0

Blast

[Close]

BLAST of TCONS_00000870 vs. Swiss-Prot (Human)
Match: FRYL (Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 2.154e-59
Identity = 187/578 (32.35%), Postives = 292/578 (50.52%), Query Frame = 3

Query:    3 HDE------KPREIPENTRQLKPVTLQGEGWGSVHSTQMVLNNLFYLTVXXXXXXX-XXXXXCWSALCARWEQNVTRILDYLIVMAGVCGTPVLM-HAKKVAIYIARAKTEKTIHVLTEELRLTEIVTNFWDRLDCPPYIKPLNKCITPPSTVSTGRKNEDYKKNITSPKKQPSLDSEYPEMRSESPSFPQQAPFNNRLSTE------RSSINSARNFAESVLESVKASQMASQIEQKKTETGSSELWMLNWVLKAHSMQGVGLPLPMPYELQYFAPITQAFP-LASPPAQLYRCNFSLMLLAEIVSDQR-DISWIFYXXXXXXXXXXXXDHAKPLVHENCKRLIINLLVVLVCDGDRSTIAKALM---DFH-----TVSSTA---LNRSASLKN------SNVKTSADGAVLESDELLKDEDRENLVAQAGGPELEERGLSI--DERAREVIEYLAKSDCKPLWAFEDITPRNGTVKSADQLESFLQIIVQLFDDALPNAL-LPGRWARESLHWATSCSSRHYAGRSFQIFRSLKIPLSWPMLSDILQRLVESVADSSDDVQGYFMEILMTFLAEVD 1628
            HDE      K RE+   +R+     L+GEGWGS  +T MVLNNL Y+T KY +  +  E+E  W+ L   W +N+  IL +LI + GV   P L+ + KKV +Y+ R KT + +  L  EL+LT+ V++    +D PPY                 R    YK     P       S    M + +   P   P    +          S +NS  N     LES  +S      E++K++  S  L+  NW LK       G PLP P     ++P+    P  +SP   L+RCN +++LL +++ D    + W  YL LLLH  F+G DH  P V+E+CKRL+++LL+V+  + +  T+A  L+   +F+     TV   A    N +A + +       +  T +  +   +   +   +    ++      L E  +S+  D + + ++E++      PLW  ED++ +N ++KSA+QL +FL+ +V +F  +    + L    +  +L  A SCSSRHYAGRSFQIFR+LK PL+   LSD+L RLVE+V D  +D QG+ +E+L+T  + +D
Sbjct: 1330 HDEDEDDSLKDRELMVTSRRW----LRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYY----------------RITSSYK----IPSVTSGTTSSSNTMVAPTDGNPDNKPIKENIEESYVHLDIYSGLNSHLNRQHHRLESRYSSSSGGSYEEEKSD--SMPLYS-NWRLKVME-HNQGEPLPFPPAGGCWSPLVDYVPETSSPGLPLHRCNIAVILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGPNSNIRTVASVLLRNKEFNEPRVLTVKQVAHLDYNFTAGINDFIPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTILNEVDISVEQDGKVKTLMEFITSRKRGPLWNHEDVSAKNPSIKSAEQLTTFLKHVVSVFKQSSSEGIHLEHHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLTATTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAID 1879

The following BLAST results are available for this feature:

BLAST of TCONS_00000870 vs. Swiss-Prot (Human)

BLAST of TCONS_00000870 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FRYL	2.154e-59	32.35	Protein furry homolog-like OS=Homo sapiens GN=FRYL...	[more]

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TCONS_00000870 (transcript) - C. hemisphaerica