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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009060 ID=TCONS_00009060|Name=TCONS_00009060|organism=Clytia hemisphaerica|type=transcript|length=1016bp
CTGTTTATTGCCAACGCGAAAGAAAAGACATTTATTTAATTATGTTTTTG
TGAAACCGGATCAAAGCCATTTTTAATGATCCCAAAGGAAATGTATGTAT
TGCTCATCAATCTTCTTGACATCTCGCgctaaaatgacgtcattaatcTA
CTTGTCAAGTCAAATTAAATAGACGACTCTCCATCGTGATGTTAATTGGT
TCTTGTTATCGATCACATTTTTTTGATTGGTAAAAAACACAGCGAAGGAG
GGTCTACTGCCCCTATTATCAAGCTGTGATGTCATCACTGTTTACATGTC
AGTAGagtaagaaaaaatcttttcatgaTCAATCTAATACTCTTGTTCAA
AGGAAAAGCTTCTTACTAAACTTATACGAAAGGACTTGACTTTCTTGTGA
GTGGTACTTTTGAAACGAATCAGTAAATTTATATGTAGttcgttttaaaa
ttttgatgtcTGCCTTGCTGgttctttttgtagaaatttgGAATTTGAGT
AATTACCCTGGACGTTAGAGAATTTTACTGATGATgttcattttgatttt
cctagTGTAGATAGAAGGGAAATTTTTATGGtgtttacaaaattttcttg
ttttgttgATACAAGAAGCTCTTGCTGCCTTTGTTTTTGTCAGTATATCC
ATGTACGTCTGTTGACATTGTATGGCCACCTACGTCAACATTGTGATCAA
CAGGATCCAAGGAGATTTAAAGAGTCTAAATGGTGTTGAATAGAGTGTGT
TTTACCTTGGTTTGGATGAAGGTTGCTTAGAGTTGGAGTCTTCGACATAT
AATTCTAACACAGAGTTAAATTTGCTTTATGTTTTGGTTTTTATTGCTAG
CCACTTAATGTATTCAATTTTGGTGATCTTGAATAACTTCCTTCTGACAT
TTGATATATAGCACTCTAAGCAAAAATGTAACCAAGTAGATAGGTACAGT
ACATTTGTATTAGAATTAGGTTAGAAATTTATCTTGAATTTTCATGCTTT
CATGGATCGTCGTATG Run BLAST on NCBI transcript from alignment at sc0000089:390470..391485 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009060 ID=TCONS_00009060|Name=TCONS_00009060|organism=Clytia hemisphaerica|type=transcript|length=1016bp|location=Sequence derived from alignment at sc0000089:390470..391485 (Clytia hemisphaerica)
CATACGACGATCCATGAAAGCATGAAAATTCAAGATAAATTTCTAACCTA
ATTCTAATACAAATGTACTGTACCTATCTACTTGGTTACATTTTTGCTTA
GAGTGCTATATATCAAATGTCAGAAGGAAGTTATTCAAGATCACCAAAAT
TGAATACATTAAGTGGCTAGCAATAAAAACCAAAACATAAAGCAAATTTA
ACTCTGTGTTAGAATTATATGTCGAAGACTCCAACTCTAAGCAACCTTCA
TCCAAACCAAGGTAAAACACACTCTATTCAACACCATTTAGACTCTTTAA
ATCTCCTTGGATCCTGTTGATCACAATGTTGACGTAGGTGGCCATACAAT
GTCAACAGACGTACATGGATATACTGACAAAAACAAAGGCAGCAAGAGCT
TCTTGTATcaacaaaacaagaaaattttgtaaacaCCATAAAAATTTCCC
TTCTATCTACActaggaaaatcaaaatgaacATCATCAGTAAAATTCTCT
AACGTCCAGGGTAATTACTCAAATTCcaaatttctacaaaaagaacCAGC
AAGGCAgacatcaaaattttaaaacgaaCTACATATAAATTTACTGATTC
GTTTCAAAAGTACCACTCACAAGAAAGTCAAGTCCTTTCGTATAAGTTTA
GTAAGAAGCTTTTCCTTTGAACAAGAGTATTAGATTGAtcatgaaaagat
tttttcttactCTACTGACATGTAAACAGTGATGACATCACAGCTTGATA
ATAGGGGCAGTAGACCCTCCTTCGCTGTGTTTTTTACCAATCAAAAAAAT
GTGATCGATAACAAGAACCAATTAACATCACGATGGAGAGTCGTCTATTT
AATTTGACTTGACAAGTAgattaatgacgtcattttagcGCGAGATGTCA
AGAAGATTGATGAGCAATACATACATTTCCTTTGGGATCATTAAAAATGG
CTTTGATCCGGTTTCACAAAAACATAATTAAATAAATGTCTTTTCTTTCG
CGTTGGCAATAAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009060-exon-sc0000089-1491911889:390470..391485 | TCONS_00009060-exon-sc0000089-1491911889:390470..391485 | Clytia hemisphaerica | exon |
| TCONS_00009060-exon-sc0000089-1510915933:390470..391485 | TCONS_00009060-exon-sc0000089-1510915933:390470..391485 | Clytia hemisphaerica | exon |
| TCONS_00009060-exon-sc0000089-1575043694:390470..391485 | TCONS_00009060-exon-sc0000089-1575043694:390470..391485 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089 | supercontig | sc0000089:390470..391485 . |
Blast
The following BLAST results are available for this feature:
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