TCONS_00008910 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008910
Unique NameTCONS_00008910
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length195

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008910 ID=TCONS_00008910|Name=TCONS_00008910|organism=Clytia hemisphaerica|type=transcript|length=195bp
GCCGAAAAACGATGGATTATATGGAGTACtgtatttgatgctattttgtg
aataattctttacgccaatattgaagctTTAGCCAACTTTAAAAATGCTT
TTTATGTCAGTGTGCCAGAACGGTACTTTACTTTGTGTGTATGTACGCGG
AAGATTTTTAGcctcatattatgaacagactcgaacactctctct
Run BLAST on NCBI

transcript from alignment at sc0000088:29055..29249

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008910 ID=TCONS_00008910|Name=TCONS_00008910|organism=Clytia hemisphaerica|type=transcript|length=195bp|location=Sequence derived from alignment at sc0000088:29055..29249 (Clytia hemisphaerica)
agagagagtgttcgagtctgttcataatatgaggCTAAAAATCTTCCGCG
TACATACACACAAAGTAAAGTACCGTTCTGGCACACTGACATAAAAAGCA
TTTTTAAAGTTGGCTAAagcttcaatattggcgtaaagaattattcacaa
aatagcatcaaatacaGTACTCCATATAATCCATCGTTTTTCGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004989XLOC_004989Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008910-exon-sc0000088-1491911889:29055..29249TCONS_00008910-exon-sc0000088-1491911889:29055..29249Clytia hemisphaericaexon
TCONS_00008910-exon-sc0000088-1510915933:29055..29249TCONS_00008910-exon-sc0000088-1510915933:29055..29249Clytia hemisphaericaexon
TCONS_00008910-exon-sc0000088-1575043694:29055..29249TCONS_00008910-exon-sc0000088-1575043694:29055..29249Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:29055..29249 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.78555	1.7412	0	1.97791	84.2772	51.3748	22.9561	47.2807	4.51396	13.0463	7.23603	11.8917	17.8127	11.0992	12.1668	15.2329	9.38286	20.6081	17.0828	35.7518	6.9055	12.631	2.04728	5.58383	47.9268	20.5313	7.34505	5.22589	1.98183	4.03834
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008910 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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