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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008779 ID=TCONS_00008779|Name=TCONS_00008779|organism=Clytia hemisphaerica|type=transcript|length=1053bp
TGACAATATATCTCAActaactaattttttttttttttctaaagcaaAGC
GGATTTCCTGTCACAAAGATATTGTTGCAGACAACACAATAGATGATGAG
TACAATGAGCGAGAAAAGATGACCATAAAAACTAGCTGCCATATATCATG
TTCATATACCAGAGTTATATCGTTTATGAAGAGAACACGTATATTTGACA
CAGTTAATTTGTTTGATTGAAACAACATGAGAGCTTTTACGTTAATTATA
CCTACTTTGCTTTTGATTGTGCTGTTGGTACACCCAAGCGAGCAGagaGC
TGTTATGAACAAACGAAGTCGGCGTAACACACCATGTCAATATGTGACAT
ACTGCCCATCACAAACTACCCAAGAATGTCAAAACCTTGCGAATGCTGAT
TCAACTTGCCACGCCACGTTCGAATGCAGACATAACATTTTTGGTGGTGG
ATGGGAATGCGTGTTGACTTCTAATGGTGGTGGACCGGGGATATAAGAAT
GGTAAATCTGAGTACATATCTGGCTAAGTGATTTAATCCTTGCCTAAAAC
TTAATCATGCGGGCTCGTGATTACACCGTTGTATAAACCGAATCAATGCC
GTTTCCAGTTTTCCGCATTATACTGCATTATGGTGAATTAGTCGTTGGTA
TTCGATTACAGATTGCTCATGAAAAGTGGGAAGACCAACTCAAAATACAC
AGTATGCAATGCTCATGAGTCCAAACAAGGACTAAATGTTTATGCTGCTC
TGTCACGCTAATCTGAGTGATTCACATATTATATTGATTCCCTTGCTGAC
TTGTATGGAAACGATCAACCTTCAACCATATATAAAGAACGAATCGTACT
TTTCCAAAAGTATTTCACGGTTGTTAAATAATCGGACAACAATCCCTAAA
ATTTTAGGATTTAGCActacaaaaatttaaattaaaaaaaaacttatata
taataatatcgcaaaatgtaaatattgaatttatttattatattatttat
tcGATTCATATAAAAGAATTTACGAAGTGAAGAATAAGCAAAATACGTAT
GAA Run BLAST on NCBI transcript from alignment at sc0000087:353732..355020- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008779 ID=TCONS_00008779|Name=TCONS_00008779|organism=Clytia hemisphaerica|type=transcript|length=1289bp|location=Sequence derived from alignment at sc0000087:353732..355020- (Clytia hemisphaerica)
TGACAATATATCTCAACTAACTAATTTTTTTTTTTTTTCTAAAGCAAAGC
GGATTTCCTGTCACAAAGATATTGTTGCAGACAACACAATAGATGATGAG
TACAATGAGCGAGAAAAGATGACCATAAAAACTAGCTGCCATATATCATG
TTCATATACCAGAGTTATATCGTTTATGAAGAGAACACGTATATTTGACA
CAGTTAATTTGTTTGATTGAAACAACATGAGAGCTTTTACGTTAATTATA
CCTACTTTGCTTTTGATTGTGCTGTTGGTACACCCAAGCGAGCAGGTGAG
AATTTTATATCAACTCCGCTTTTTTTAATTGGAAACTGCTGCCTTTCATC
ATTTAAAACCACATGCTAATTATAGAGAGTTTATCATTGAACTTTTGAAC
TTTAACAATATGACAGTTATATATAAGGTGTGTATGGGGTCAAAATATCA
TAGAAACTCTAACCCCGAAGAAGTTATTTATCGTTTTCAGTCATGGAATC
TAATCATTTTTTACATTATTTTCTTTTAAAGAGAGCTGTTATGAACAAAC
GAAGTCGGCGTAACACACCATGTCAATATGTGACATACTGCCCATCACAA
ACTACCCAAGAATGTCAAAACCTTGCGAATGCTGATTCAACTTGCCACGC
CACGTTCGAATGCAGACATAACATTTTTGGTGGTGGATGGGAATGCGTGT
TGACTTCTAATGGTGGTGGACCGGGGATATAAGAATGGTAAATCTGAGTA
CATATCTGGCTAAGTGATTTAATCCTTGCCTAAAACTTAATCATGCGGGC
TCGTGATTACACCGTTGTATAAACCGAATCAATGCCGTTTCCAGTTTTCC
GCATTATACTGCATTATGGTGAATTAGTCGTTGGTATTCGATTACAGATT
GCTCATGAAAAGTGGGAAGACCAACTCAAAATACACAGTATGCAATGCTC
ATGAGTCCAAACAAGGACTAAATGTTTATGCTGCTCTGTCACGCTAATCT
GAGTGATTCACATATTATATTGATTCCCTTGCTGACTTGTATGGAAACGA
TCAACCTTCAACCATATATAAAGAACGAATCGTACTTTTCCAAAAGTATT
TCACGGTTGTTAAATAATCGGACAACAATCCCTAAAATTTTAGGATTTAG
CACTACAAAAATTTAAATTAAAAAAAAACTTATATATAATAATATCGCAA
AATGTAAATATTGAATTTATTTATTATATTATTTATTCGATTCATATAAA
AGAATTTACGAAGTGAAGAATAAGCAAAATACGTATGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008779-exon-sc0000087-1575043694:354726..355020 | TCONS_00008779-exon-sc0000087-1575043694:354726..355020 | Clytia hemisphaerica | exon |
| TCONS_00008779-exon-sc0000087-1575043694:353732..354489 | TCONS_00008779-exon-sc0000087-1575043694:353732..354489 | Clytia hemisphaerica | exon |
| TCONS_00008779-exon-sc0000087-1510915933:354726..355020 | TCONS_00008779-exon-sc0000087-1510915933:354726..355020 | Clytia hemisphaerica | exon |
| TCONS_00008779-exon-sc0000087-1510915933:353732..354489 | TCONS_00008779-exon-sc0000087-1510915933:353732..354489 | Clytia hemisphaerica | exon |
| TCONS_00008779-exon-sc0000087-1491911889:354726..355020 | TCONS_00008779-exon-sc0000087-1491911889:354726..355020 | Clytia hemisphaerica | exon |
| TCONS_00008779-exon-sc0000087-1491911889:353732..354489 | TCONS_00008779-exon-sc0000087-1491911889:353732..354489 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087 | supercontig | sc0000087:353732..355020 - |
Blast
The following BLAST results are available for this feature:
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