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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008433 ID=TCONS_00008433|Name=TCONS_00008433|organism=Clytia hemisphaerica|type=transcript|length=4886bp
AAAAGCTAGAAAAATACCGATTAAATAAAATTTGAAAGAAATATTGAATA
TGAAATTTAGGCGTAAGCGAAATTTAAAATCGATAGCAAAATAAATAGAA
ACTTTTTTTTGCCCCTGCGTCAAACGGAATGTGTAGTCTTTCCGGCGTGT
ATGAAAAATAACTTAATCTTAAAAACGTTAAAATTTCCCCTTCGATATGT
AAGCAGGCGAAGAAGGAGTTAAAAAGGAGTTAAAGAAAAAATATTTAGGT
CTGAGTTGTATAATGAGTTTCAATATTTGAGGGATAGCGAGTGTTTTGAC
GTTGTACAGGCTTTCTGGGTGTGGCCGACCAGGGACCTGGAAAGGCGGAA
ATCGAAACGGGAGTGTCCGCACGTTTAAAATTAAACGCCTCCAGGGATTC
ACGCATCGCATAATTAACGGTGTATCGAAAATTATAAAGTTGTATCAAAC
ATACTTAATGACGCGTTATTCATCATTTAATGACTTTTGATTTCGTATCA
TCAACGCCATCAAAAGCATCTCATCAAAAGGAAAAGAAAAATCACAAAAC
TTCTTTTTGTGACTTGAGGTCCAATTTAACGGCTTAATGATATAATAGGG
TGGGATGGTAATTACAAACTGACCAGAAATTATACGTAATGGTTTCACGG
CTCAATTTTCGTCCTATCTAGTACGTGGTTGAGATACGTATGTTTTATAA
TTTATCTCACCAATCCCACTATTTCCAAAAACAATTTTCCTTCTCAAAAA
AAGATAAAGTAATACTGTATCATCTTCAGACTTGTGAATTATTTTATTGA
TCATCGATCAGATATCTTTTTCGAATGATTCGCGCGCCCTATCGCACGGA
TCTCTACACTCAAAAGAATTTTGTGGCATTCTCTTTATTGCCTGATATAA
AGCTCGCAAGAAAAAAGTTAAGTAAAGGAAGCTTCAATAACGAAAGATAG
GATGAATAAAATCTCTATCGTTTCATAGTTGATGGTTTTGATTTTATCGT
CTTTTATAGCGATAAAATGCACCATAAAAAAGTTCTTTCTGATAATATAA
AATAGACGAGTTAAAAAAAAGCGCAAGTGAGAAAAATCTTGTTCTTACAC
AAAAAAAGCTGTACGGAGGAGAACACTATTTAGTTTCTATGTAAAAGAGA
GCAATTACGTTTTTATGAGGGCTCCCTTCGTCTATTTATTGGCTTATTCT
GTTCTCAACAATAGCGAGCATTGTGTGTATTCTACAGATTCATTCATTCA
ACACGCTTTTATAAACATCCAATCAGATCACGTTATTATATATCACGTGA
CCCATTccgattgttttgaaattatattattcTGGCAATATGAAGCGAGC
TGTGAAAAGTATAGCTTGAAAGTTCACATGAGAGAAAGTTGTAATGAGAA
GAGAAAGATAGCTCTAAGTTGAGGAGAGCAGAAAAAAAgagatattattt
ttttgtgttttaataaTCAGTCGTGAAGTTGTAAAATAAAAGCGACGTGC
AATCCATGCGGGCAGAGGGACACTGTTACAAGTGAGTTATATTTTGGATG
TGAAGAGAATTTTTTTGGAATCATAGTTGAGATATAtatttacaaaatca
aaacattggaaaattatacaaaaaagtCTTAACACAAGAACACTATTATA
TAAGCTGATCATTGGAGTTTAAGTCACTATGAATGTTGATCCNAACAttg
gaaaattatacaaaaaagtCTTAACACAAGAACACTATTATATAAGCTGA
TCATTGGAGTTTAAGTCACTATGAATGTTGATCCACCAACCGTGATCTTA
GACGATGGACCGATGTTGGAGAGAGAGGATAGGCCTCGGTCAAGGACGTG
GCCCATTTTGCCGCCACCCATTGAGACGATACACGAACATGAGCGAGACG
CCGAGATTGCTGAACCACCAGCTATAATCGAGGAAGATGAAGCCGAGCAT
CTCGatacagaaaaacaaaaacctgAACCAAATCCAAGAAAAAACTCTCG
TAAAAACGCATGGGGAAATTTATCATATGCTGACTTGATAACACGAGCTA
TCCAAAGCTCACCTGAGCAGAGACTGACTTTATCACAGATCTATGAATGG
ATGGTTCGAAATATCCCTTACTTTAAGGATAAAGGCGATTCAACCTCAAG
TGCTGGCTGGAAGAATTCGATCCGTCACAATTTGTCGCTTCACAGTCGTT
TCATGAGAGTTCAGAATGATAACAATGGAAAGAGTTCATACTGGGTCATA
AACCCTGATGCTAAACCAGGAAAATCAAATCGCAGACGATCAGGATCGAT
CGACGGGCAGCCTAAAGATGGCAAGAAAAGACGAACCAAGAAATTACACC
AAAGCACTGACGACATTTCTGCTTTATCACCAAATACCATGAAATTCAAG
CAGAATCGCTCCTTCGATAACCTTTTCAATATTGGATCACCTTGCTCCAG
TACTGATTCATTGTCCAACATTGATGATTACCATGGTGTAGAAATGGGAG
GAGGATTCCCATACAATGGTGAAGCATTCGGTCGTCCACGATCCACCTCC
AATGTCTCAAATGTCTCAAGTGTTAGTGGTCGCATGACACCAACACAACT
TGATATCGACGCAGACATCGCACAGCTGGAGCAATCCAACTTATTGCAAA
AGCAAGTCCCTGGCGCAGAGGAAACAGCCAACATGGTGGAGTCAATGTAC
ATCGACCCTAACACACATCACCAACAGCAACAAGCACAACAACGAAACAT
GGCTTCCATTAATTTGAATGATTCAATGAAAATCATGAAGACAAACGACA
TGAATTATCCAACAGTCGCCGTCACTAACACCGATCCTTTACTTCCACCG
AGACGTCCACATTCTGATTCCTTCGGTAGTGGTTCATCAGCCGATTCCGG
TTACGAAAGCCCTGCTTACTTCTCACCTCCCAATCAACCAGGTGCGCAGA
ACCGTGGAAACATGGGGAAACTACCTTCTCCAAACGTACCAAACAAACCA
CCACCTCCTTACAATCAAGCATACGTTAACCAAATGAACAGACAGAACCA
ACAGATGTATCAAAACCAACAACAACGAATGATGAACAACCCTTaccaac
aagcacaaaatgcaCAACAAGCCAATAGGATGGGCATCAACACCCACATG
GTGACCGCACCGCGTCTTACACACCTCCCAATGCAAGCTCAACAATTTGT
ACCCAGTCCACAAAGCATGCAAACAAACGGACCGTTCAACAATTACAATC
AAACAGTAGCACAACCACAAAATATGCAGCAAATGAACTCGACTCATTTT
TCGCATAATGTGACGTTAAACCAACAATCTTTTCAACAGCAGCAGGTACC
ACAACCACAATTCTCCATGAAGAAAACCAATGCCCCAACTGTGAACATTT
TTGATACTGAAATTCCTGACGATTTATCTCAAGTCAAACTTTATGATTTC
GGTGATCAACAACAGTTAGCCTCTGATGTTGACGCCATCATGAAAACTGA
ACAGGGAGTTTTCAGAGGTTTTCCCGCCAATAATTGCGGACCTGGAAGTA
CAGGTAGCAACGATACAAACAATAATACCAATATGCAGAATTCAGCAGGT
TCCTTTCCTCTGGCGGGACAAAATTGGGTGAGATGACGAGAGTGTGCagg
gaaaaattctttttataaggaTATACTGACAGGTGCTGGAAACAGATGAA
AGGCGGCCGCCCTGGTCTCGAGGGTGAAGGAAACAGCAGGATGTGTTTTT
GCCTCTTCAATGAAAAAACTGGATTACTGTaaaacaaaaaacgaaaattt
ttttcaatgggTATATTTTACGTCTTAATTTCAGCTGGATTGAGATTAAG
GAGGATTTATTTTTGTGTCGTTCTATACCTGGAAAAGTTGATTAGCGACA
GATGGAGATGAAACTTTAGACCTGGTTTACACGATGGACATTTTGACACA
ACTATGTTGTATAATTTGTGATGGAAAGAAATGAGATTGATATCATGAAC
ATTTCGAATATTTTAGCTGCCTTGTGTACAAAAAAGTAGGTTGGGAATCG
AGATAGAAAGAATATATTGTTTAAAATCTAAACAGATAAATAGGGGCTAG
TGGAAGAACATGGAACACTTTATTATAGTAGTAAAATTTCTATCTGTTAT
ATTGTATTTgcagaaatttttaaaacaaaacttaGTAATATTTATTGCGA
CTTTTTTTGTAACctttcaaaatctaaaagaaTCATTTAGTAGAAGTATT
ATTAATATGAAGAGTAGAGCAAAGGGGGAAATTTATGTCCTCCAAAACTC
TTCTCATATCTCATGCAAAAATGtcatttacaattttttaattcACTTTC
ATTAAACTGACAGTTTTGTTACTTATTTTCTGTTCAAACTTGCGCTTTTT
TTGGtgaatttctttgtattttttgaatctCAAGAAATTTGAATCTGATT
ACAAATATTTGATTTAGATTACTTCATTTTTCGAGTTGAATTGTGTTTAT
ACGTTCGTATTTGAAAGTTATTCATAATtatcctttcaattttttctttt
gcttttacgTCCCTTaaaacttttaacttttaaatcTATAAAGTTTTGAA
CTGAGGGGTTGTTCTTTTTTCACCTCGGTCACCCAGCTGACATATAATCG
TCCACGCAACGTctatctaacgttaaatggacgttgaaaaaacgtttgtG
GCAGTCAGGGAAAGAAGATCTTGATGCCTCCTTTTGGAAAATTGTCTTTT
AAGTGATTTTCCTCTAGCTGTATTATTTTTTGTATTCTTGCTTTTTTTTG
GTTTCTTGTACATATTGTTTATAGCAGACGAAGCGCGGTTTCTATCAAAA
TCGTTCAAAAATGATATTATGTTGAAatgctttaat Run BLAST on NCBI protein sequence of forkhead box-containing transcription factor FoxO >TCONS_00008433-protein ID=TCONS_00008433-protein|Name=forkhead box-containing transcription factor FoxO|organism=Clytia hemisphaerica|type=polypeptide|length=621bp
MNVDPPTVILDDGPMLEREDRPRSRTWPILPPPIETIHEHERDAEIAEPP
AIIEEDEAEHLDTEKQKPEPNPRKNSRKNAWGNLSYADLITRAIQSSPEQ
RLTLSQIYEWMVRNIPYFKDKGDSTSSAGWKNSIRHNLSLHSRFMRVQND
NNGKSSYWVINPDAKPGKSNRRRSGSIDGQPKDGKKRRTKKLHQSTDDIS
ALSPNTMKFKQNRSFDNLFNIGSPCSSTDSLSNIDDYHGVEMGGGFPYNG
EAFGRPRSTSNVSNVSSVSGRMTPTQLDIDADIAQLEQSNLLQKQVPGAE
ETANMVESMYIDPNTHHQQQQAQQRNMASINLNDSMKIMKTNDMNYPTVA
VTNTDPLLPPRRPHSDSFGSGSSADSGYESPAYFSPPNQPGAQNRGNMGK
LPSPNVPNKPPPPYNQAYVNQMNRQNQQMYQNQQQRMMNNPYQQAQNAQQ
ANRMGINTHMVTAPRLTHLPMQAQQFVPSPQSMQTNGPFNNYNQTVAQPQ
NMQQMNSTHFSHNVTLNQQSFQQQQVPQPQFSMKKTNAPTVNIFDTEIPD
DLSQVKLYDFGDQQQLASDVDAIMKTEQGVFRGFPANNCGPGSTGSNDTN
NNTNMQNSAGSFPLAGQNWVR Run BLAST on NCBI transcript from alignment at sc0000085:9680..15585- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008433 ID=TCONS_00008433|Name=TCONS_00008433|organism=Clytia hemisphaerica|type=transcript|length=5906bp|location=Sequence derived from alignment at sc0000085:9680..15585- (Clytia hemisphaerica)
AAAAGCTAGAAAAATACCGATTAAATAAAATTTGAAAGAAATATTGAATA
TGAAATTTAGGCGTAAGCGAAATTTAAAATCGATAGCAAAATAAATAGAA
ACTTTTTTTTGCCCCTGCGTCAAACGGAATGTGTAGTCTTTCCGGCGTGT
ATGAAAAATAACTTAATCTTAAAAACGTTAAAATTTCCCCTTCGATATGT
AAGCAGGCGAAGAAGGAGTTAAAAAGGAGTTAAAGAAAAAATATTTAGGT
CTGAGTTGTATAATGAGTTTCAATATTTGAGGGATAGCGAGTGTTTTGAC
GTTGTACAGGCTTTCTGGGTGTGGCCGACCAGGGACCTGGAAAGGCGGAA
ATCGAAACGGGAGTGTCCGCACGTTTAAAATTAAACGCCTCCAGGGATTC
ACGCATCGCATAATTAACGGTGTATCGAAAATTATAAAGTTGTATCAAAC
ATACTTAATGACGCGTTATTCATCATTTAATGACTTTTGATTTCGTATCA
TCAACGCCATCAAAAGCATCTCATCAAAAGGAAAAGAAAAATCACAAAAC
TTCTTTTTGTGACTTGAGGTCCAATTTAACGGCTTAATGATATAATAGGG
TGGGATGGTAATTACAAACTGACCAGAAATTATACGTAATGGTTTCACGG
CTCAATTTTCGTCCTATCTAGTACGTGGTTGAGATACGTATGTTTTATAA
TTTATCTCACCAATCCCACTATTTCCAAAAACAATTTTCCTTCTCAAAAA
AAGATAAAGTAATACTGTATCATCTTCAGACTTGTGAATTATTTTATTGA
TCATCGATCAGATATCTTTTTCGAATGATTCGCGCGCCCTATCGCACGGA
TCTCTACACTCAAAAGAATTTTGTGGCATTCTCTTTATTGCCTGATATAA
AGCTCGCAAGAAAAAAGTTAAGTAAAGGAAGCTTCAATAACGAAAGATAG
GATGAATAAAATCTCTATCGTTTCATAGTTGATGGTTTTGATTTTATCGT
CTTTTATAGCGATAAAATGCACCATAAAAAAGTTCTTTCTGATAATATAA
AATAGACGAGTTAAAAAAAAGCGCAAGTGAGAAAAATCTTGTTCTTACAC
AAAAAAAGCTGTACGGAGGAGAACACTATTTAGTTTCTATGTAAAAGAGA
GCAATTACGTTTTTATGAGGGCTCCCTTCGTCTATTTATTGGCTTATTCT
GTTCTCAACAATAGCGAGCATTGTGTGTATTCTACAGATTCATTCATTCA
ACACGCTTTTATAAACATCCAATCAGATCACGTTATTATATATCACGTGA
CCCATTCCGATTGTTTTGAAATTATATTATTCTGGCAATATGAAGCGAGC
TGTGAAAAGTATAGCTTGAAAGTTCACATGAGAGAAAGTTGTAATGAGAA
GAGAAAGATAGCTCTAAGTTGAGGAGAGCAGAAAAAAAGAGATATTATTT
TTTTGTGTTTTAATAATCAGTCGTGAAGTTGTAAAATAAAAGCGACGTGC
AATCCATGCGGGCAGAGGGACACTGTTACAAGTGAGTTATATTTTGGATG
TGAAGAGAATTTTTTTGGAATCATAGTTGAGATATATATTTACAAAATCA
AAACATTGGAAAATTATACAAAAAAGTCTTAACACAAGAACACTATTATA
TAAGCTGATCATTGGAGTTTAAGTCACTATGAATGTTGATCCNAACATTG
GAAAATTATACAAAAAAGTCTTAACACAAGAACACTATTATATAAGCTGA
TCATTGGAGTTTAAGTCACTATGAATGTTGATCCACCAACCGTGATCTTA
GACGATGGACCGATGTTGGAGAGAGAGGATAGGCCTCGGTCAAGGNAACC
GTGATCTTAGACGATGGACCGATGTTGGAGAGAGAGGATAGGCCTCGGTC
AAGGACGTGGCCCATTTTGCCGCCACCCATTGAGACGATACACGAACATG
AGCGAGACGCCGAGATTGCTGAACCACCAGCTATAATCGAGGAAGATGAA
GCCGAGCATCTCGATACAGAAAAACAAAAACCTGAACCAAATCCAAGAAA
AAACTCTCGTAAAAACGCATGGGGAAATTTATCATATGCTGACTTGATAA
CACGAGCTATCCAAAGCTCACCTGAGCAGAGACTGACTTTATCACAGATC
TATGAATGGATGGTTCGAAATATCCCTTACTTTAAGGATAAAGGCGATTC
AACCTCAAGTGCTGGCTGGAAGGTAGGCTTTAAATAAATTTGCGTTACAA
GGTGATATGGANTTAAATAAATTTGCGTTATTGCGAACATGGCCAATTTA
AGTGACCATCCTCTTAACGTTCGTTTTGAGTAATAGCAACAAATGAAAAC
TTTGAACTTTTTCATATTATTCTTAACAAGTTTTGTTTTGTTGATTTAAG
AGCTTAAAATGAATCTTTGACACACGATTTTGTAGAAACTACAAGCTCGA
GTAGTGTGATTAGAAAATGTGATTTCTAAAAACTTGCGCCAGTACAAAAA
AGACCATCAAATATTTTTCTTGTCAAAAATTAAATTTTCGATGTTTTCTT
CCTACGAAAAAAAAAACGAAGAAATTTTTCTCTTTATTTTTCCCTCATTT
TTGGCATTATTTCTTGAGTCTTTTTTTCTTTTTGATAAAAAAGAAAGGAA
TTTCGTAATGCAAGGAGCAGAATGCCACTTTTCTATTTCGGCTCTTCTTC
ATCAATAAAATATAAAGTGGTTTCGGTTCACAATAAAAATCCTCAAAAAA
TGAAGCTTCGAAATTTCGAAACTGCCCAACTGGACCTTGTTTCGCTACCT
TTTTTCTCTCTCCTCATTGGCTTGCTATATTTAGTTCTCATGCATACTGG
TATTTCAATTCAATAAAAGTACATTTAAGCATCCTCTTCTTTTCAATCGG
TCTTCCTATCAAAATCCTCAAAATACTCCAATCTTAAAAAGTTATTATAT
AAAAATGAGAATAAAATTTAACTTTCCTCTCATAATTCATCTATGCCACT
TTTTTTGGAGCTATTATAAATTCAAAATGAACATAAGACCCTTCAATTAA
ATCGTTTAGAAAGTTTTTCTTTTCATCATTTACAACTTCCTGGATTGAGT
TGTGTTTGGGTCAGCACGACCTTTAATTTTTCTTGCAAGATCATGCAACT
AAACATTTTTCTCCCTTCTTTTCGACCATTCAGAATTCGATCCGTCACAA
TTTGTCGCTTCACAGTCGTTTCATGAGAGTTCAGAATGATAACAATGGAA
AGAGTTCATACTGGGTCATAAACCCTGATGCTAAACCAGGAAAATCAAAT
CGCAGACGATCAGGATCGATCGACGGGCAGCCTAAAGATGGCAAGAAAAG
ACGAACCAAGAAATTACACCAAAGCACTGACGACATTTCTGCTTTATCAC
CAAATACCATGAAATTCAAGCAGAATCGCTCCTTCGATAACCTTTTCAAT
ATTGGATCACCTTGCTCCAGTACTGATTCATTGTCCAACATTGATGATTA
CCATGGTGTAGAAATGGGAGGAGGATTCCCATACAATGGTGAAGCATTCG
GTCGTCCACGATCCACCTCCAATGTCTCAAATGTCTCAAGTGTTAGTGGT
CGCATGACACCAACACAACTTGATATCGACGCAGACATCGCACAGCTGGA
GCAATCCAACTTATTGCAAAAGCAAGTCCCTGGCGCAGAGGAAACAGCCA
ACATGGTGGAGTCAATGTACATCGACCCTAACACACATCACCAACAGCAA
CAAGCACAACAACGAAACATGGCTTCCATTAATTTGAATGATTCAATGAA
AATCATGAAGACAAACGACATGAATTATCCAACAGTCGCCGTCACTAACA
CCGATCCTTTACTTCCACCGAGACGTCCACATTCTGATTCCTTCGGTAGT
GGTTCATCAGCCGATTCCGGTTACGAAAGCCCTGCTTACTTCTCACCTCC
CAATCAACCAGGTGCGCAGAACCGTGGAAACATGGGGAAACTACCTTCTC
CAAACGTACCAAACAAACCACCACCTCCTTACAATCAAGCATACGTTAAC
CAAATGAACAGACAGAACCAACAGATGTATCAAAACCAACAACAACGAAT
GATGAACAACCCTTACCAACAAGCACAAAATGCACAACAAGCCAATAGGA
TGGGCATCAACACCCACATGGTGACCGCACCGCGTCTTACACACCTCCCA
ATGCAAGCTCAACAATTTGTACCCAGTCCACAAAGCATGCAAACAAACGG
ACCGTTCAACAATTACAATCAAACAGTAGCACAACCACAAAATATGCAGC
AAATGAACTCGACTCATTTTTCGCATAATGTGACGTTAAACCAACAATCT
TTTCAACAGCAGCAGGTACCACAACCACAATTCTCCATGAAGAAAACCAA
TGCCCCAACTGTGAACATTTTTGATACTGAAATTCCTGACGATTTATCTC
AAGTCAAACTTTATGATTTCGGTGATCAACAACAGTTAGCCTCTGATGTT
GACGCCATCATGAAAACTGAACAGGGAGTTTTCAGAGGTTTTCCCGCCAA
TAATTGCGGACCTGGAAGTACAGGTAGCAACGATACAAACAATAATACCA
ATATGCAGAATTCAGCAGGTTCCTTTCCTCTGGCGGGACAAAATTGGGTG
AGATGACGAGAGTGTGCAGGGAAAAATTCTTTTTATAAGGATATACTGAC
AGGTGCTGGAAACAGATGAAAGGCGGCCGCCCTGGTCTCGAGGGTGAAGG
AAACAGCAGGATGTGTTTTTGCCTCTTCAATGAAAAAACTGGATTACTGT
AAAACAAAAAACGAAAATTTTTTTCAATGGGTATATTTTACGTCTTAATT
TCAGCTGGATTGAGATTAAGGAGGATTTATTTTTGTGTCGTTCTATACCT
GGAAAAGTTGATTAGCGACAGATGGAGATGAAACTTTAGACCTGGTTTAC
ACGATGGACATTTTGACACAACTATGTTGTATAATTTGTGATGGAAAGAA
ATGAGATTGATATCATGAACATTTCGAATATTTTAGCTGCCTTGTGTACA
AAAAAGTAGGTTGGGAATCGAGATAGAAAGAATATATTGTTTAAAATCTA
AACAGATAAATAGGGGCTAGTGGAAGAACATGGAACACTTTATTATAGTA
GTAAAATTTCTATCTGTTATATTGTATTTGCAGAAATTTTTAAAACAAAA
CTTAGTAATATTTATTGCGACTTTTTTTGTAACCTTTCAAAATCTAAAAG
AATCATTTAGTAGAAGTATTATTAATATGAAGAGTAGAGCAAAGGGGGAA
ATTTATGTCCTCCAAAACTCTTCTCATATCTCATGCAAAAATGTCATTTA
CAATTTTTTAATTCACTTTCATTAAACTGACAGTTTTGTTACTTATTTTC
TGTTCAAACTTGCGCTTTTTTTGGTGAATTTCTTTGTATTTTTTGAATCT
CAAGAAATTTGAATCTGATTACAAATATTTGATTTAGATTACTTCATTTT
TCGAGTTGAATTGTGTTTATACGTTCGTATTTGAAAGTTATTCATAATTA
TCCTTTCAATTTTTTCTTTTGCTTTTACGTCCCTTAAAACTTTTAACTTT
TAAATCTATAAAGTTTTGAACTGAGGGGTTGTTCTTTTTTCACCTCGGTC
ACCCAGCTGACATATAATCGTCCACGCAACGTCTATCTAACGTTAAATGG
ACGTTGAAAAAACGTTTGTGGCAGTCAGGGAAAGAAGATCTTGATGCCTC
CTTTTGGAAAATTGTCTTTTAAGTGATTTTCCTCTAGCTGTATTATTTTT
TGTATTCTTGCTTTTTTTTGGTTTCTTGTACATATTGTTTATAGCAGACG
AAGCGCGGTTTCTATCAAAATCGTTCAAAAATGATATTATGTTGAAATGC
TTTAAT Coding sequence (CDS) from alignment at sc0000085:9680..15585- >TCONS_00008433 ID=TCONS_00008433|Name=TCONS_00008433|organism=Clytia hemisphaerica|type=CDS|length=5598bp|location=Sequence derived from alignment at sc0000085:9680..15585- (Clytia hemisphaerica)
AATTCGATCCGTCACAATTTGTCGCTTCACAGTCGTTTCATGAGAGTTCA
GAATGATAACAATGGAAAGAGTTCATACTGGGTCATAAACCCTGATGCTA
AACCAGGAAAATCAAATCGCAGACGATCAGGATCGATCGACGGGCAGCCT
AAAGATGGCAAGAAAAGACGAACCAAGAAATTACACCAAAGCACTGACGA
CATTTCTGCTTTATCACCAAATACCATGAAATTCAAGCAGAATCGCTCCT
TCGATAACCTTTTCAATATTGGATCACCTTGCTCCAGTACTGATTCATTG
TCCAACATTGATGATTACCATGGTGTAGAAATGGGAGGAGGATTCCCATA
CAATGGTGAAGCATTCGGTCGTCCACGATCCACCTCCAATGTCTCAAATG
TCTCAAGTGTTAGTGGTCGCATGACACCAACACAACTTGATATCGACGCA
GACATCGCACAGCTGGAGCAATCCAACTTATTGCAAAAGCAAGTCCCTGG
CGCAGAGGAAACAGCCAACATGGTGGAGTCAATGTACATCGACCCTAACA
CACATCACCAACAGCAACAAGCACAACAACGAAACATGGCTTCCATTAAT
TTGAATGATTCAATGAAAATCATGAAGACAAACGACATGAATTATCCAAC
AGTCGCCGTCACTAACACCGATCCTTTACTTCCACCGAGACGTCCACATT
CTGATTCCTTCGGTAGTGGTTCATCAGCCGATTCCGGTTACGAAAGCCCT
GCTTACTTCTCACCTCCCAATCAACCAGGTGCGCAGAACCGTGGAAACAT
GGGGAAACTACCTTCTCCAAACGTACCAAACAAACCACCACCTCCTTACA
ATCAAGCATACGTTAACCAAATGAACAGACAGAACCAACAGATGTATCAA
AACCAACAACAACGAATGATGAACAACCCTTACCAACAAGCACAAAATGC
ACAACAAGCCAATAGGATGGGCATCAACACCCACATGGTGACCGCACCGC
GTCTTACACACCTCCCAATGCAAGCTCAACAATTTGTACCCAGTCCACAA
AGCATGCAAACAAACGGACCGTTCAACAATTACAATCAAACAGTAGCACA
ACCACAAAATATGCAGCAAATGAACTCGACTCATTTTTCGCATAATGTGA
CGTTAAACCAACAATCTTTTCAACAGCAGCAGGTACCACAACCACAATTC
TCCATGAAGAAAACCAATGCCCCAACTGTGAACATTTTTGATACTGAAAT
TCCTGACGATTTATCTCAAGTCAAACTTTATGATTTCGGTGATCAACAAC
AGTTAGCCTCTGATGTTGACGCCATCATGAAAACTGAACAGGGAGTTTTC
AGAGGTTTTCCCGCCAATAATTGCGGACCTGGAAGTACAGGTAGCAACGA
TACAAACAATAATACCAATATGCAGAATTCAGCAGGTTCCTTTCCTCTGG
CGGGACAAAATTGGGTGAGATGAGACGTGGCCCATTTTGCCGCCACCCAT
TGAGACGATACACGAACATGAGCGAGACGCCGAGATTGCTGAACCACCAG
CTATAATCGAGGAAGATGAAGCCGAGCATCTCGATACAGAAAAACAAAAA
CCTGAACCAAATCCAAGAAAAAACTCTCGTAAAAACGCATGGGGAAATTT
ATCATATGCTGACTTGATAACACGAGCTATCCAAAGCTCACCTGAGCAGA
GACTGACTTTATCACAGATCTATGAATGGATGGTTCGAAATATCCCTTAC
TTTAAGGATAAAGGCGATTCAACCTCAAGTGCTGGCTGGAAGATGAATGT
TGATCCACCAACCGTGATCTTAGACGATGGACCGATGTTGGAGAGAGAGG
ATAGGCCTCGGTCAAGAATTCGATCCGTCACAATTTGTCGCTTCACAGTC
GTTTCATGAGAGTTCAGAATGATAACAATGGAAAGAGTTCATACTGGGTC
ATAAACCCTGATGCTAAACCAGGAAAATCAAATCGCAGACGATCAGGATC
GATCGACGGGCAGCCTAAAGATGGCAAGAAAAGACGAACCAAGAAATTAC
ACCAAAGCACTGACGACATTTCTGCTTTATCACCAAATACCATGAAATTC
AAGCAGAATCGCTCCTTCGATAACCTTTTCAATATTGGATCACCTTGCTC
CAGTACTGATTCATTGTCCAACATTGATGATTACCATGGTGTAGAAATGG
GAGGAGGATTCCCATACAATGGTGAAGCATTCGGTCGTCCACGATCCACC
TCCAATGTCTCAAATGTCTCAAGTGTTAGTGGTCGCATGACACCAACACA
ACTTGATATCGACGCAGACATCGCACAGCTGGAGCAATCCAACTTATTGC
AAAAGCAAGTCCCTGGCGCAGAGGAAACAGCCAACATGGTGGAGTCAATG
TACATCGACCCTAACACACATCACCAACAGCAACAAGCACAACAACGAAA
CATGGCTTCCATTAATTTGAATGATTCAATGAAAATCATGAAGACAAACG
ACATGAATTATCCAACAGTCGCCGTCACTAACACCGATCCTTTACTTCCA
CCGAGACGTCCACATTCTGATTCCTTCGGTAGTGGTTCATCAGCCGATTC
CGGTTACGAAAGCCCTGCTTACTTCTCACCTCCCAATCAACCAGGTGCGC
AGAACCGTGGAAACATGGGGAAACTACCTTCTCCAAACGTACCAAACAAA
CCACCACCTCCTTACAATCAAGCATACGTTAACCAAATGAACAGACAGAA
CCAACAGATGTATCAAAACCAACAACAACGAATGATGAACAACCCTTACC
AACAAGCACAAAATGCACAACAAGCCAATAGGATGGGCATCAACACCCAC
ATGGTGACCGCACCGCGTCTTACACACCTCCCAATGCAAGCTCAACAATT
TGTACCCAGTCCACAAAGCATGCAAACAAACGGACCGTTCAACAATTACA
ATCAAACAGTAGCACAACCACAAAATATGCAGCAAATGAACTCGACTCAT
TTTTCGCATAATGTGACGTTAAACCAACAATCTTTTCAACAGCAGCAGGT
ACCACAACCACAATTCTCCATGAAGAAAACCAATGCCCCAACTGTGAACA
TTTTTGATACTGAAATTCCTGACGATTTATCTCAAGTCAAACTTTATGAT
TTCGGTGATCAACAACAGTTAGCCTCTGATGTTGACGCCATCATGAAAAC
TGAACAGGGAGTTTTCAGAGGTTTTCCCGCCAATAATTGCGGACCTGGAA
GTACAGGTAGCAACGATACAAACAATAATACCAATATGCAGAATTCAGCA
GGTTCCTTTCCTCTGGCGGGACAAAATTGGGTGAGATGAGACGTGGCCCA
TTTTGCCGCCACCCATTGAGACGATACACGAACATGAGCGAGACGCCGAG
ATTGCTGAACCACCAGCTATAATCGAGGAAGATGAAGCCGAGCATCTCGA
TACAGAAAAACAAAAACCTGAACCAAATCCAAGAAAAAACTCTCGTAAAA
ACGCATGGGGAAATTTATCATATGCTGACTTGATAACACGAGCTATCCAA
AGCTCACCTGAGCAGAGACTGACTTTATCACAGATCTATGAATGGATGGT
TCGAAATATCCCTTACTTTAAGGATAAAGGCGATTCAACCTCAAGTGCTG
GCTGGAAGATGAATGTTGATCCACCAACCGTGATCTTAGACGATGGACCG
ATGTTGGAGAGAGAGGATAGGCCTCGGTCAAGAATTCGATCCGTCACAAT
TTGTCGCTTCACAGTCGTTTCATGAGAGTTCAGAATGATAACAATGGAAA
GAGTTCATACTGGGTCATAAACCCTGATGCTAAACCAGGAAAATCAAATC
GCAGACGATCAGGATCGATCGACGGGCAGCCTAAAGATGGCAAGAAAAGA
CGAACCAAGAAATTACACCAAAGCACTGACGACATTTCTGCTTTATCACC
AAATACCATGAAATTCAAGCAGAATCGCTCCTTCGATAACCTTTTCAATA
TTGGATCACCTTGCTCCAGTACTGATTCATTGTCCAACATTGATGATTAC
CATGGTGTAGAAATGGGAGGAGGATTCCCATACAATGGTGAAGCATTCGG
TCGTCCACGATCCACCTCCAATGTCTCAAATGTCTCAAGTGTTAGTGGTC
GCATGACACCAACACAACTTGATATCGACGCAGACATCGCACAGCTGGAG
CAATCCAACTTATTGCAAAAGCAAGTCCCTGGCGCAGAGGAAACAGCCAA
CATGGTGGAGTCAATGTACATCGACCCTAACACACATCACCAACAGCAAC
AAGCACAACAACGAAACATGGCTTCCATTAATTTGAATGATTCAATGAAA
ATCATGAAGACAAACGACATGAATTATCCAACAGTCGCCGTCACTAACAC
CGATCCTTTACTTCCACCGAGACGTCCACATTCTGATTCCTTCGGTAGTG
GTTCATCAGCCGATTCCGGTTACGAAAGCCCTGCTTACTTCTCACCTCCC
AATCAACCAGGTGCGCAGAACCGTGGAAACATGGGGAAACTACCTTCTCC
AAACGTACCAAACAAACCACCACCTCCTTACAATCAAGCATACGTTAACC
AAATGAACAGACAGAACCAACAGATGTATCAAAACCAACAACAACGAATG
ATGAACAACCCTTACCAACAAGCACAAAATGCACAACAAGCCAATAGGAT
GGGCATCAACACCCACATGGTGACCGCACCGCGTCTTACACACCTCCCAA
TGCAAGCTCAACAATTTGTACCCAGTCCACAAAGCATGCAAACAAACGGA
CCGTTCAACAATTACAATCAAACAGTAGCACAACCACAAAATATGCAGCA
AATGAACTCGACTCATTTTTCGCATAATGTGACGTTAAACCAACAATCTT
TTCAACAGCAGCAGGTACCACAACCACAATTCTCCATGAAGAAAACCAAT
GCCCCAACTGTGAACATTTTTGATACTGAAATTCCTGACGATTTATCTCA
AGTCAAACTTTATGATTTCGGTGATCAACAACAGTTAGCCTCTGATGTTG
ACGCCATCATGAAAACTGAACAGGGAGTTTTCAGAGGTTTTCCCGCCAAT
AATTGCGGACCTGGAAGTACAGGTAGCAACGATACAAACAATAATACCAA
TATGCAGAATTCAGCAGGTTCCTTTCCTCTGGCGGGACAAAATTGGGTGA
GATGAGACGTGGCCCATTTTGCCGCCACCCATTGAGACGATACACGAACA
TGAGCGAGACGCCGAGATTGCTGAACCACCAGCTATAATCGAGGAAGATG
AAGCCGAGCATCTCGATACAGAAAAACAAAAACCTGAACCAAATCCAAGA
AAAAACTCTCGTAAAAACGCATGGGGAAATTTATCATATGCTGACTTGAT
AACACGAGCTATCCAAAGCTCACCTGAGCAGAGACTGACTTTATCACAGA
TCTATGAATGGATGGTTCGAAATATCCCTTACTTTAAGGATAAAGGCGAT
TCAACCTCAAGTGCTGGCTGGAAGATGAATGTTGATCCACCAACCGTGAT
CTTAGACGATGGACCGATGTTGGAGAGAGAGGATAGGCCTCGGTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008433-exon-sc0000085-1575043694:13742..15585 | TCONS_00008433-exon-sc0000085-1575043694:13742..15585 | Clytia hemisphaerica | exon |
| TCONS_00008433-exon-sc0000085-1575043694:13364..13682 | TCONS_00008433-exon-sc0000085-1575043694:13364..13682 | Clytia hemisphaerica | exon |
| TCONS_00008433-exon-sc0000085-1575043694:9680..12402 | TCONS_00008433-exon-sc0000085-1575043694:9680..12402 | Clytia hemisphaerica | exon |
| TCONS_00008433-exon-sc0000085-1510915933:13742..15585 | TCONS_00008433-exon-sc0000085-1510915933:13742..15585 | Clytia hemisphaerica | exon |
| TCONS_00008433-exon-sc0000085-1510915933:13364..13682 | TCONS_00008433-exon-sc0000085-1510915933:13364..13682 | Clytia hemisphaerica | exon |
| TCONS_00008433-exon-sc0000085-1510915933:9680..12402 | TCONS_00008433-exon-sc0000085-1510915933:9680..12402 | Clytia hemisphaerica | exon |
| TCONS_00008433-exon-sc0000085-1491911889:13742..15585 | TCONS_00008433-exon-sc0000085-1491911889:13742..15585 | Clytia hemisphaerica | exon |
| TCONS_00008433-exon-sc0000085-1491911889:13364..13682 | TCONS_00008433-exon-sc0000085-1491911889:13364..13682 | Clytia hemisphaerica | exon |
| TCONS_00008433-exon-sc0000085-1491911889:9680..12402 | TCONS_00008433-exon-sc0000085-1491911889:9680..12402 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085 | supercontig | sc0000085:9680..15585 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | sequence-specific DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0043565 |
sequence-specific DNA binding |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
Blast
BLAST of TCONS_00008433 vs. Swiss-Prot (Human)
Match: FOXO3 (Forkhead box protein O3 OS=Homo sapiens GN=FOXO3 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.596e-48 Identity = 90/118 (76.27%), Postives = 102/118 (86.44%), Query Frame = 1
Query: 1984 PRK-NSRKNAWGNLSYADLITRAIQSSPEQRLTLSQIYEWMVRNIPYFKDKGDSTSSAGWKNSIRHNLSLHSRFMRVQNDNNGKSSYWVINPD-AKPGKSNRRRSGSIDGQPKDGKKR 2331
PRK +SR+NAWGNLSYADLITRAI+SSP++RLTLSQIYEWMVR +PYFKDKGDS SSAGWKNSIRHNLSLHSRFMRVQN+ GKSS+W+INPD K GK+ RRR+ S+D K K R
Sbjct: 147 PRKCSSRRNAWGNLSYADLITRAIESSPDKRLTLSQIYEWMVRCVPYFKDKGDSNSSAGWKNSIRHNLSLHSRFMRVQNEGTGKSSWWIINPDGGKSGKAPRRRAVSMDNSNKYTKSR 264
The following BLAST results are available for this feature:
|
