TCONS_00007625 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007625
Unique NameTCONS_00007625
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length795

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007625 ID=TCONS_00007625|Name=TCONS_00007625|organism=Clytia hemisphaerica|type=transcript|length=795bp
tttagtgataaatatacaaaaaatcagaacagcaatattttataaaacat
GTTTGGTGAGAAAGCATTTGAATTGATCAAAGAATTGAAAAGATCTACTG
ATGGAAACCTACCAGCATTTAATGAGGACTTGGTACGTCAAGTGTTGGAT
GAAATGAGGGttttattcgaagaaaatcaaaaagaagtcacAGCGTCCGT
GGAAGGGGAAGAAGGTTTATACTCAGGTGTTCAATTACGTCACGAAAGTT
TGGAGCGAAACAAAAGATGTCTGCTAGCATACATATACAACCGAATGATG
AGGATAAAACAATACCGTTGGGATATTGGGAGTGTCCTCCCACAAGACGT
CAAACTGAATCTCGTCGAACAAGAGgtGAAATGGTTTACAGAGTACAACA
AATCGCTAGCAAAATATATGATGTCGACTGCTGGTGGTCATGGTATCGAC
TTAACACAGAATATGACTCCACCAAAATCACTTTACATTGAGGTGCGTTG
TTTGGTGGATTACGGAGAATTCGAAACGGAAGATGGAACCGTTGTCATCC
TCAAAAAGAATAGCCAGcatttcctCCCAACAACGCAATGTGAACATTTA
GTACGTCAAGGAATTCTTGAACATATTTTAGCataatttttctataagaa
aattTAGATTTAGAATTTTGTGTAAATATTTATATCGGAAAGCAAGAGAA
TATTTATTAAATGGTTTTTAAACGTCTTGtgtgtgatttcttttttttgg
ggGTGTAGGGTTAAATTCAGGATAGTAAGAGATAGCAGAGGGGCA
Run BLAST on NCBI

transcript from alignment at sc0000078:530030..540146-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007625 ID=TCONS_00007625|Name=TCONS_00007625|organism=Clytia hemisphaerica|type=transcript|length=10117bp|location=Sequence derived from alignment at sc0000078:530030..540146- (Clytia hemisphaerica)
TTTAGTGATAAATATACAAAAAATCAGAACAGCAATATTTTATAAAACAT GTTTGGTGAGAAAGCATTTGAATTGATCAAAGAATTGAAAAGATCTACTG ATGGAAACCTACCAGCATTTAATGTAAGAATCATTATATTCAATGTATAC GATAATCTCAAGCTTCAAAATGAGATAATCACTTTTTTAATCTTTGTTCA AATCAGTCTTCATTGTGCAGATGTCAATTTTAAAATCATTTCATAACTGT GCGAAAGGGGGTTAGGTTCCACTTTACTATGATTGACATAAAGTAGTTCA ATTTATGGATTGGTACCATCATTGACGATACTGACGTCATCATTCAACCC CAGTACACTTGAACCCAGCCTTCTTTTAGATCTAGGGCTGATATAGCTAA GAATATTGGAACAGGTTTTCCTTTTGAACTACAGTTGACGCTCTCGCGCT CTCTAACTCGGCGTTTTACTTTTTGGTACGCTCCATTATTCGATGGTATT GAAAGTCACCATCAACAAGAAACTCTTATAAACGACACTAAACTATTCGA TACACTCTATTTCGATAAAAAACAAATTCCTCTTGAAAATCGAATTAGAG AGCGTCAACTGTATATAGGTTAATTCGAATATTTCTTTCTTTACCAGGAG GACTTGGTACGTCAAGTGTTGGATGAAATGAGGGTTTTATTCGAAGAAAA TCAAAAAGAAGTGTAAGTAATATACCTGGGTTGGTAGCTTTTTTTTTTCA AAAGCTGAACCCACAGAACAGCTTGTTCAATATATACAATACAAGCAATG ATGAGCTTGAATTGTACATTTTTGGTGCTCATAATAAAAAGCACAGAATT TTGTTTTCGCATTGACAAGATGGCTAGTGGTCTAAGTTTTTGGAGGTTTT TGCGTCTAGACGGATGGTCGTAATGACAGCTTGATATGTCCCGAAAATTC ATTCCGACTGTGAAGCAGTCTTTTCTCACCCACTAGTTGATAGAAACACT TAAAGTTTTTTTTTTTCAATTTCAGCACAGCGTCCGTGGAAGGAGAAGAA GGTTTATACTCAGGTGTTCAATTACGTCACGAAAGTTTGGAGCGAAACAA AAGATGTCTGCTAGCATACATGTAAGGTCAAAATGTGTCTATACTGAGCA AGAGGCCTTTATCTGGTTATTGAATCAAGTTTCGATATGCCTAAGGGTTT GTTTATTTTAAACACTGGTAATCTTAGATTTGTCCAAATTTGTTGTTTTT TTCCCAATACAGGGAAGCGTAAATGAGTCAATTACAGTCAACCTACTGAC TCAAACCTGTACTGCTCGAATGGCTCCACACCNTTTTCTTTACCAGGAGG ACTTGGTACGTCAAGTGTTGGATGAAATGAGGGTTTTATTCGAAGAAAAT CAAAAAGAAGTGTAAGTAATATACCTGGGTTGGTAGCATTTTTTTTTTTT CAAAAGCTGACCCCACAGAACAGCTTGTTCAATATATACAATACAAGCAA TGATGAGCTTGAATTGTACATTTTTGGTGCTCATAATAAAAAGCACAGAA TTTTGTTTTCGCATTGACAAGATGGCTAGTGGTCTAAGTTTTTGGAGGTT TTTGCGTCTAGACGGATGGTCGTAATGACAGCTTGATATGTCCCGAAAAT TCATTTCGACTGTGAAGCAGTCTTTTCTCACCCACTAGTTAATAGAAACA CTTAAAGTTTTTTTTTCAATTTCAGCACAGCGTCCGTGGAAGGGGAAGAA GGTTTATACTCAGGTGTTCAATTACGTCACGAAAGTTTGGAGCGAAACAA AAGATGTCTGCTAGCATACATGTAAGGTCAAAATGTGTCTATACTAAGCA AGAGGCCTTTATCTGGTTATTGAATCAAGTTTCGATATACCTAAGGGTTT GTTTATTTTAAACACTGGTCATCTTAGATTTGTCCAAATTTGTTGTTTTT TCCAATACAGGGAAGCGTAAATGAGTCAATTACAGTCAACCTACTGACTC GAACCTGTACAGCTCGAATGTCTCCACACCTCAGTGGGCTTTTCTGTTTC CCTGAGGTCTTCGTGTCATGACAATTCGATATGAAGATTCTTTTTTATAC AATTTTCTCTGCGTTTTTCACCACCAGATACAACCGAATGATGAGGATAA AACAATACCGTTGGGATATTGGGAGTGTCCTCCCACAAGACGTCAAACTG AATCTCGTCGAACAAGAGGTATAGGGATATAGGCAATACTCATGGGGAAC GCTAATTCGTCCTATTGCTGCTATTGCTGAGAATTTGATTGAGTAGATAT TTATTATTCATGTAACCTCTCCCTTCTCCACAGGCTCAAAGCTTGATCCA CCCCTTTTAGGAAAGTTCTTAATACATCAACTCCTTTCGCCAAAAAGAAA TTCAGGGTTTGAGCTTGTGCCTGTACTATGGAGCGATCAATGAATTCACT CAATTCATTAAGTGTCGCTAGCGTCATATGAAATCGTTCACTTTTTTTGG TTCTGTACCGGTGGGTTTAGACCTAAGAGCACTGTCTTCCATGCCTCCAT GTTTTTTACCTCGCCCGTTTTTTACCCGGCCTGAATAAAAATTTAGAATT TACATTTTTTACTTGGTTTGGGTGTATTTAATCTGAAGTGGCATTTAATT GGTCAATGATGCAAAAGAAAGGAATAGCAGTTTCTTAATTGAAGGATAGG TTTAAAAAGACCATAAAACTCAAACCATCCTCTGCAGTACATGCAAAATA TTTTATATCTTGGATTTCGTTTTTTCTTTTTCCAGGTGAAATGGTTTACA GAGTACAACAAATCGCTAGCAAAATATATGATGTCGACTGCTGGTGGTCA TGGTATCGACTTAACACAGGTGTGTATCTACAAGTTTACCTCTACCGCTT GACAGATTTGGGGTTAAATATATGTCAAATGTCTGAATAGCAGACCTCTA TAGATGTATTAACTGTAAAAGAAACTCTTTTTGCTGTGAAAAGAAGCCTA GGAATTAAATTTCTCAAATATATCAACTGATTGACTAGTCTGATTTGCAG ACCATTAGATATGCTTCCTATAAGACATTTTTTTCGTTAGAAGATACGCA GAAGCATACTTCGGGATTGATAGAGAACGATGGTCAGTTTTAAGTGCAGT GTTTTTTACATTAAGGTTCACAATTTGACGATGAGGTTTTTTTCTTTCTG TTTCAGAATATGACTCCACCAAAATCACTTTACATTGAGGTACGATCTTT TGTTTCTATTTTTTTTGTTTCTTCTTTTCCCCTCCATGTAAAAAAAAATT TCCAACGACACATTAACGCTGATAATTTGATTTTAATATCTGGGGATTTT AAGGAATTTTTTACCAGACCGCGTCACGGATTTTGAAGCGGGAGACTTGA ACCCTAGCCCTCGTTTTCAGGGATTTCGGGCAAATCTGAAATATTTTCAG GCTTAAGCGTCTTGGAATGCAGGACATAAAAGTTCGGCTATCATTCCCCT CCGATGGGAAATCGACACGCTTTAGTGTGGTGGCCACTATTCCATCGATC CGCCATCGTAATATCAGATAAGGACGGTCGCGGATCCACCATTGAGATAA CCTCCTAACTAGCACAGAACGCCAGCTTTGTTTCAACGTTCATATATAAC GCCATTTGGGAGTTTGGGGTGTCAGAAGCAGCCGGCGGAGAGATTTTTTA GAAAATATGTGTTTTTATCTTCTAGGACACCACATTTTATGACCTCCAAT TTTCTTTTACAAATGATGTGTTCTAAAATCTAGAAAAAACATTTTGCCAA GATATACTTTAAGATATTTGTTTTTTTCCACGAACCAAAGATGTGTTCTG AAACCTTAGGGTTAATAGGCAACAAGATCACATCAATTTTCTCTTGATTA TACCCCTGTCTTTTTAAAGGTTGTGTTCTGAAGCTTTCTAGGGTTACCTA GACAACAAGAACAATTTTGATGACCTTGATTATACCCCTGTCTCGTCAGA ACACATCATTATTTCTAGCTGAAACATACTCTCAGAACACATCGGAAAAA AAGGTCGCTTCGCCGGCTGCTTTCGGGGTTTGTCCCATAAGCTAGAAAGG GCTCGAATCAATTTAAAAGGCTAAGGGTAATTGTCCTAGAGGGTAATCGT CCGGGTGCATTTCAGGAGCAAAGATCCCTAGTGACAATTTTCTGAGGGAG GGGGCAATCCATTGAGTCTAAAACCCGAAGGGCTAGATTTCAAAATATGC AGCCCTCTAAAACAAAGGAACCGCTAGATACAACCTGTCCTCGTGATCGC GGCGCGTTCTAGGCTTGTTCTGTATGTGAAGTAAGTGTCTTCACTTTTTC TTGCCTGGGAAGGGTTAGAGATTCTACTCTAGCCCTTCGGGTTTTAAACT CAATGCTACAAACCCCCCCATTTAGGTTCTCTATGAAAAAGTAAAATGGT ATCTACAACCTCGTGTACAATATTCTTCATGCATCACGTTTAACACATCG TTGTACAGCAGATACCCCCCTGCTTGACCTCGTTATTTTATGGTCAATTT TTCTCATTTTGAATATTATGCGAAATTTTCGACTTCCGAGTCGTCTTGTT AATTTCGCCTAGCGAAAGTATTACAATCAGCTTTCGTGGGTCGTCGCGGG TCGGAAAAAAAATTAGAAAACGAAAGTACTTGATACGGTGGACTAAAATT AATTTACAAATTACACGCTCGTATAACCACGGACGATTTTCGTAGGTTTT CTTTGGATTACGTCATATATCTTTGTGTCTTTAGCTTCACAGTNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTGATAGACGGTGATATACCTTTTGGATAGACGGTG ACATACCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGACGGCGCTC AATATGAGCATGTTCATTTTTCCTATAAACATTTACTTTATAAGAATCAA ATCAATAACTCTCGATAGACAGTGGTATACCTTTCAGATTAGTTTTTACA AAGTAAACAAGGGACGGTGCTCAATATGAGCTTATTCATTTTTCTTATAA GCATTTACTTTATAAGAATCAAATCAATAACTCTCGATAGACGGTGGTAT ACCTTTCGGTAATTAGTTGTTACAAAGTAAACAAAGGACGGTGCACAATA TAAGCATATTTATTTTTCTTATAAGCATATACTTTATAAGAATTAAATCA ATAGCTCTTGATAGACGGTGACATACCTTTCGGTAATTAGTTGTTACAAA GTAAACAAAGGACGGTGCACAATATAAGCATATTTATTTTTCTTATAAGC ATATACTTTATAAGAATTAAATCAATAGCTCTTGATAGACGGTGACATAC CTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGGACCGCGCTGCTCAA TATGAGTATATTCATTTTTCTTATAAGCATTTACTCATAAGAATCAAATC AAAAACTCTCGATAGACGATGATATACCTTTTGGTAATTAGTTCTTACAA AGTAAACAAGGGATGACGCATGATATGAACATATTTATTTTTCTTGTAAG CATATACTTTATAAGAATCAAATCAATAACTCTTGAAAGACGGTGATATA CCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGGACCGCGCTGCTCA ATATGAGTATATGCATTTTTCTTATAAGCGTTTACTTTATAAGAATCAAA TCAATAACTCTTGAAAGACGGTGATATACCTTTCGGTAATTAGTTCTTAC AAAGTAAACAAGGGACGGAGCACAGTTTGAGCATATTCATTTTTCTTATA AGCGTTTACTTTATAAGAATAAAATCAATAACTCTTGATAGACGGTGATA TACCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGATGGCGTGCAAT ATGAGCATATTTACTTTTTATAAGCATATACTTTATAAGAGTTCTTAAAA GTCAAACAACAATTGTTCTTAAATTGGTCTTATTTTTTAGTGATTTTAAG CCTCGTTGTTCTTGTGAAATTGTTTCATCAAGGCTCGATGTAAAGTAGAT CTCTACTTCTTGTTTTTCCCATGCAGTTCAAATTCTAGGCGAAATTTTCG ACTTTAAGTCGTCTTGTTTTACTTCCTTTTGGACCTACCCCGGTGGGCTT TAAACTCAACGGGATTGCCCCATTGTCCTAGGGGTAAATGTCCAAAATCG TATTTTTAGAGCTTTTTCTTTATTGGAGTTGTGTGTATTTCGCACATCTT ATCATGGACAATTTCGACCTTAATATGATGATCCATTCTGGACAATTTAC CACCATCAAAGATGTATTTCTACTGTCTTTAGATAAGTCAGTCGTCATAG TAGAGGCTACGTCGATGATATTGAAAGTCATCGTCAACAAAAAGCTCTCA AACACCGCTCCTACCTTCGATATACTTTCTTGGTTTCGTTTGAATTCGGT GAAAATCGAATTAGAGAGCGTCAACTATATTTTCTCATTTTTTGTTAGGT GCGTTGTTTGGTGGATTACGGAGAATTCGAAACGGAAGATGGAACCGTTG TCATCCTCAAAAAGAATAGCCAGGTAGGAAAGGTCAAATTGTACCTTTTA AAATCTTCATACTTTTGCAAAATTTGTTTGAGAGTCCACTGAAATCTCGA TTGTTTTCAACCCAAAGGTGAGAAGAGTGGTCTATTATTTTACCAAAAAA AGGTATTATGAGTTTACGGATAAGAATTTTCTTTTGAATCAACAAAAGAT TTTCATCATCAAACTCACAATATCCTGTCAAATATGTATAACTTCTTTTT AGTGCACCCGGTGTAGTATCTAGGTTTGGTTCTAGCCTCTTATAACCTCA AATAATATAACACTTGGTAATAAACTTTTCTTTTAAGAACATCCAAAAAA ATTTTAAGCCTTAAAATGTTCTTAAATTGTTCTTTATTTCACCTTTTTAT GGATATTTTATGTTTAATTTCCTAATAAATCGATTGTGATTTTAGAGTCC GCAAAGCCTTGAATGTTTTTAACTTGTTCTTAATATTCTGCCCATTTAAG CATTATTTTCTTATATACTGTAGTTTGTTCTCATAAAGAACTTGTAAACA TAATGGAATTGGAAGGTAATGATTTTCTTTATTTTTCAGCATTTCCTCCC AACAACGCAATGTGAACATTTAGTACGTCAAGGAATTCTTGAACATATTT TAGCATAATTTTTCTATAAGAAAATTTAGATTTAGAATTTTGTGTAAATA TTTATATCGGAAAGCAAGAGAATATTTATTAAATGGTTTTTAAACGTCTT GTGTGTGATTTCTTTTTTTTGGGGGTGTAGGGTTAAATTCAGGATAGTAA GAGATAGCAGAGGGGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004304XLOC_004304Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007625-exon-sc0000078-1575043694:540024..540146TCONS_00007625-exon-sc0000078-1575043694:540024..540146Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1575043694:538736..538800TCONS_00007625-exon-sc0000078-1575043694:538736..538800Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1575043694:538326..538421TCONS_00007625-exon-sc0000078-1575043694:538326..538421Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1575043694:537929..538019TCONS_00007625-exon-sc0000078-1575043694:537929..538019Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1575043694:537278..537361TCONS_00007625-exon-sc0000078-1575043694:537278..537361Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1575043694:536908..536940TCONS_00007625-exon-sc0000078-1575043694:536908..536940Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1575043694:530824..530898TCONS_00007625-exon-sc0000078-1575043694:530824..530898Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1575043694:530030..530257TCONS_00007625-exon-sc0000078-1575043694:530030..530257Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1510915933:540024..540146TCONS_00007625-exon-sc0000078-1510915933:540024..540146Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1510915933:538736..538800TCONS_00007625-exon-sc0000078-1510915933:538736..538800Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1510915933:538326..538421TCONS_00007625-exon-sc0000078-1510915933:538326..538421Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1510915933:537929..538019TCONS_00007625-exon-sc0000078-1510915933:537929..538019Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1510915933:537278..537361TCONS_00007625-exon-sc0000078-1510915933:537278..537361Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1510915933:536908..536940TCONS_00007625-exon-sc0000078-1510915933:536908..536940Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1510915933:530824..530898TCONS_00007625-exon-sc0000078-1510915933:530824..530898Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1510915933:530030..530257TCONS_00007625-exon-sc0000078-1510915933:530030..530257Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1491911889:540024..540146TCONS_00007625-exon-sc0000078-1491911889:540024..540146Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1491911889:538736..538800TCONS_00007625-exon-sc0000078-1491911889:538736..538800Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1491911889:538326..538421TCONS_00007625-exon-sc0000078-1491911889:538326..538421Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1491911889:537929..538019TCONS_00007625-exon-sc0000078-1491911889:537929..538019Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1491911889:537278..537361TCONS_00007625-exon-sc0000078-1491911889:537278..537361Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1491911889:536908..536940TCONS_00007625-exon-sc0000078-1491911889:536908..536940Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1491911889:530824..530898TCONS_00007625-exon-sc0000078-1491911889:530824..530898Clytia hemisphaericaexon
TCONS_00007625-exon-sc0000078-1491911889:530030..530257TCONS_00007625-exon-sc0000078-1491911889:530030..530257Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:530030..540146 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.226819 0.655253 0.245384 0 2.64528 3.12161 3.16906 3.74064 3.56992 2.98997 2.5898 1.96331 1.94341 2.54028 0 0 0 0 0 0 0 0 0 0 4.56816 4.44296 0 0 0.273587 0
Blast
BLAST of TCONS_00007625 vs. Swiss-Prot (Human)
Match: PSF1 (DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 3.148e-82
Identity = 113/196 (57.65%), Postives = 149/196 (76.02%), Query Frame = 1
Query:   49 MFGEKAFELIKELKRSTDGNLPAFNEDLVRQVLDEMRVLFEENQKEVT-ASVEGEEGLYSGVQLRHESLERNKRCLLAYIYNRMMRIKQYRWDIGSVLPQDVKLNLVEQEVKWFTEYNKSLAKYMMSTAGGHGIDLTQNMTPPKSLYIEVRCLVDYGEFETEDGTVVILKKNSQHFLPTTQCEHLVRQGILEHILA 633
            MF EKA ELI+EL R+ +G LPAFNED +RQVL+EM+ L+E+NQ +V  A   G   L   ++ RH SL RN+RC +AY+Y+R++RI+  RW+ GSVLP  ++ ++  +E++WF  Y +SLA YM S  G  G+D+TQ+M PPKSLYIEVRCL DYGEFE +DGT V+LKKNSQHFLP  +CE L+RQG+LEHIL+
Sbjct:    1 MFCEKAMELIRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSGGRSDLIPTIKFRHCSLLRNRRCTVAYLYDRLLRIRALRWEYGSVLPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGEFEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHILS 196          
The following BLAST results are available for this feature:
BLAST of TCONS_00007625 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSF13.148e-8257.65DNA replication complex GINS protein PSF1 OS=Homo ... [more]
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