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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073344 ID=TCONS_00073344|Name=TCONS_00073344|organism=Clytia hemisphaerica|type=transcript|length=1001bp
CTGCaattagacgatgttatcgtccgttacagtggtaataaaggcgggaa
aaatggcggtatggcgttatggcggtatacggaaaaaaatcggcgggaga
gtttcgaagaaacggacgataccaatttggcgcATCTTCACTCAAACGAT
TTTGCCTGACTGACCTCTGAGAGAGGNNAGTGCAAACAGCTAAACGTTTG
AGAAAGATGGCTGATGAAATTTCACTCAGattgtttttatgagatttatt
ttcatgGTGGAGaacaatttttacttttattagtCTTTTTTATGCATGAA
TTTTTGTGTACAGTATATAAGTCTTTAGTGTGTCAGTAGGGATTAGATTC
CTCAAGAtttgcttttggaaaaatctttttggatATGAACAACAACCTGA
CTGACTTTCCCCTCAAGATTCCATTTTAATCAGGCAAGATATGTTTTCCA
TTCTTTCCattccttgaaattttcagcttgTGCTTTTATGTGGTTTATGA
GCATGAGCAAGTAATTTTCACATATTCTCACTCTTATTCTCAACTACTTT
ATACCTCAaactactttttgatttttgattgaaaatactttccttcatgt
actatttttttttgtgaaatcacCAAAAAGGTTTTGGTAATAAGTTTCCC
TAGCTACTGCTTATAtacctttttataaaattatttcatgTTATTTTATG
TAATTTGTGCAATTTGTGAAATTGAACCAGTAGAACGtggttggaaaatt
gttctgtacgttatatgaagaataaaaccattcaaaacaataaaaaatgg
tACTGCTAAATGCAAGCTGTGAATACTCATGTCGCTACCCGTACATTTAa
cctatttatttaatttttgagaaatttttctatataagtggttaatttgt
tgttttgttttctacTTGTTTAGGGTAAGATGTAAAAATTGTACTTACAT
TCTCAAGCAATTGTTATTCCTTTACTATTCTACTACAGGTCAAGACATTC
A Run BLAST on NCBI transcript from alignment at scaffold_9:255777..256777 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073344 ID=TCONS_00073344|Name=TCONS_00073344|organism=Clytia hemisphaerica|type=transcript|length=1001bp|location=Sequence derived from alignment at scaffold_9:255777..256777 (Clytia hemisphaerica)
TGAATGTCTTGACCTGTAGTAGAATAGTAAAGGAATAACAATTGCTTGAG
AATGTAAGTACAATTTTTACATCTTACCCTAAACAAgtagaaaacaaaac
aacaaattaaccacttatatagaaaaatttctcaaaaattaaataaatag
gtTAAATGTACGGGTAGCGACATGAGTATTCACAGCTTGCATTTAGCAGT
accattttttattgttttgaatggttttattcttcatataacgtacagaa
caattttccaaccaCGTTCTACTGGTTCAATTTCACAAATTGCACAAATT
ACATAAAATAAcatgaaataattttataaaaaggtaTATAAGCAGTAGCT
AGGGAAACTTATTACCAAAACCTTTTTGgtgatttcacaaaaaaaaatag
tacatgaaggaaagtattttcaatcaaaaatcaaaaagtagttTGAGGTA
TAAAGTAGTTGAGAATAAGAGTGAGAATATGTGAAAATTACTTGCTCATG
CTCATAAACCACATAAAAGCAcaagctgaaaatttcaaggaatGGAAAGA
ATGGAAAACATATCTTGCCTGATTAAAATGGAATCTTGAGGGGAAAGTCA
GTCAGGTTGTTGTTCATatccaaaaagatttttccaaaagcaaaTCTTGA
GGAATCTAATCCCTACTGACACACTAAAGACTTATATACTGTACACAAAA
ATTCATGCATAAAAAAGactaataaaagtaaaaattgttCTCCACcatga
aaataaatctcataaaaacaatCTGAGTGAAATTTCATCAGCCATCTTTC
TCAAACGTTTAGCTGTTTGCACTNNCCTCTCTCAGAGGTCAGTCAGGCAA
AATCGTTTGAGTGAAGATgcgccaaattggtatcgtccgtttcttcgaaa
ctctcccgccgatttttttccgtataccgccataacgccataccgccatt
tttcccgcctttattaccactgtaacggacgataacatcgtctaattGCA
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073344-exon-scaffold_9-1491911889:255777..256777 | TCONS_00073344-exon-scaffold_9-1491911889:255777..256777 | Clytia hemisphaerica | exon |
| TCONS_00073344-exon-scaffold_9-1510915933:255777..256777 | TCONS_00073344-exon-scaffold_9-1510915933:255777..256777 | Clytia hemisphaerica | exon |
| TCONS_00073344-exon-scaffold_9-1575043694:255777..256777 | TCONS_00073344-exon-scaffold_9-1575043694:255777..256777 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:255777..256777 . |
Blast
The following BLAST results are available for this feature:
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