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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073272 ID=TCONS_00073272|Name=TCONS_00073272|organism=Clytia hemisphaerica|type=transcript|length=1085bp
ACTGCGGAAAATATCAATAACATATCATTAAACGAATGCGAAAATATTGG
ATTAATTGAATGCTTGAACCTTTTTTGAACTTCTATTGGctaaaagtaaa
acaaaagcTTGACATTCTATTAGAATCATCTGCAGTGAACCAGATTCAAT
CAGGAAAAACTGACAACGGAAGATTCAGCACCACGAATAATCGACAATGG
ATGAACACGGCAAACTAACCATCTTTATCTTATTCCGTATCGTACCCATA
TTTTTCCATTCGCTTGGTCTTTATCTGCTATTAACCATCAATTTTATGAA
ACGTTACCAAAGAATCCAAGGGCGATATCTCTTATGGTTAAGCAGTATCG
AAATCGCTATGAATGTAACCAAAATAGCAATTCAATTGACTAAAAAATAT
GGAGATGTCGCTTTCTATTTGGATACATTGCGAACCGGATTTATCGGGAT
GCAAATGTTGTTAATACTAATGGCAATGACGATTGACCGTGCAGTTTATG
TCTTTCTAAGCTTTCAGTATAAAATGAAGAAAGCTAATAAAGCAACTAAT
AAGATCATCTGTTGTGTGCTTTTACTGGCTATTCTAGTCACTGTCACATT
GTTTCTGACACAGGACACAAAAACACAACTCAGCCGTACAaaagttgtat
atttttggcCAATCATAGATGGAATCGTACTTTTAACATTTGTTTTTTGT
TACATATCAATGATCAAAACAACATCAGATCGAAGTAAGAAATTATTTGG
TGCTGAATCAGAAAGGTTTAGAAATCGAATGCAGAAAGCAACATTGGTCC
CAAAACTTATCGTATTCTCATTCATTATATGCTGGTTTAGTTCGGATATT
ATCTATCTAGGATTTGCGTTAGCTGGTAAAGAGGTGCCCACCTGGCTCGT
CCATGTTATTAACGTCTTTATATGTACGGCATATACAACTGACGCCGTCT
TCTACATATATTTTTGTCGGCCAGTGAGAAGAATGCTCAAATCAAAGATC
ACTAAATCACAAGCAGAGGCTAGGGTTGGTTATGATACAACTGCAGAATT
TTCACAAGTGACAAGCAACAATAACAATAACATTG Run BLAST on NCBI transcript from alignment at scaffold_89:287966..289050- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073272 ID=TCONS_00073272|Name=TCONS_00073272|organism=Clytia hemisphaerica|type=transcript|length=1085bp|location=Sequence derived from alignment at scaffold_89:287966..289050- (Clytia hemisphaerica)
ACTGCGGAAAATATCAATAACATATCATTAAACGAATGCGAAAATATTGG
ATTAATTGAATGCTTGAACCTTTTTTGAACTTCTATTGGCTAAAAGTAAA
ACAAAAGCTTGACATTCTATTAGAATCATCTGCAGTGAACCAGATTCAAT
CAGGAAAAACTGACAACGGAAGATTCAGCACCACGAATAATCGACAATGG
ATGAACACGGCAAACTAACCATCTTTATCTTATTCCGTATCGTACCCATA
TTTTTCCATTCGCTTGGTCTTTATCTGCTATTAACCATCAATTTTATGAA
ACGTTACCAAAGAATCCAAGGGCGATATCTCTTATGGTTAAGCAGTATCG
AAATCGCTATGAATGTAACCAAAATAGCAATTCAATTGACTAAAAAATAT
GGAGATGTCGCTTTCTATTTGGATACATTGCGAACCGGATTTATCGGGAT
GCAAATGTTGTTAATACTAATGGCAATGACGATTGACCGTGCAGTTTATG
TCTTTCTAAGCTTTCAGTATAAAATGAAGAAAGCTAATAAAGCAACTAAT
AAGATCATCTGTTGTGTGCTTTTACTGGCTATTCTAGTCACTGTCACATT
GTTTCTGACACAGGACACAAAAACACAACTCAGCCGTACAAAAGTTGTAT
ATTTTTGGCCAATCATAGATGGAATCGTACTTTTAACATTTGTTTTTTGT
TACATATCAATGATCAAAACAACATCAGATCGAAGTAAGAAATTATTTGG
TGCTGAATCAGAAAGGTTTAGAAATCGAATGCAGAAAGCAACATTGGTCC
CAAAACTTATCGTATTCTCATTCATTATATGCTGGTTTAGTTCGGATATT
ATCTATCTAGGATTTGCGTTAGCTGGTAAAGAGGTGCCCACCTGGCTCGT
CCATGTTATTAACGTCTTTATATGTACGGCATATACAACTGACGCCGTCT
TCTACATATATTTTTGTCGGCCAGTGAGAAGAATGCTCAAATCAAAGATC
ACTAAATCACAAGCAGAGGCTAGGGTTGGTTATGATACAACTGCAGAATT
TTCACAAGTGACAAGCAACAATAACAATAACATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073272-exon-scaffold_89-1575043694:287966..289050 | TCONS_00073272-exon-scaffold_89-1575043694:287966..289050 | Clytia hemisphaerica | exon |
| TCONS_00073272-exon-scaffold_89-1510915933:287966..289050 | TCONS_00073272-exon-scaffold_89-1510915933:287966..289050 | Clytia hemisphaerica | exon |
| TCONS_00073272-exon-scaffold_89-1491911889:287966..289050 | TCONS_00073272-exon-scaffold_89-1491911889:287966..289050 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_89 | supercontig | scaffold_89:287966..289050 - |
Blast
The following BLAST results are available for this feature:
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