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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073130 ID=TCONS_00073130|Name=TCONS_00073130|organism=Clytia hemisphaerica|type=transcript|length=838bp
TATGATGAAAACTGTCTTACCTGTATATATTAATAAGATGATTGAGCACT
TCACGAGGTTCTTTCGATGTCAAGGGCCGTAACTGCACGAACCGAGTAAA
AGCACACAAAACAGATAGTATATATTTATACGTTTTATCGCCAATGGTGA
TTGGATAGCTTTCCATGTTAACCAGATCAATTTGATTATGTGATTGAACC
GTTTTAGACACGACTGGTTGCAGCCTATTTTTGTTCTTAAAAAGGGGTTT
CTGTTGACAATGATCTTTATTTCTGTTTAACCATGTTTGAATATATCTTC
TCGGAATGCCGTGGAATTTGGTCTGTATTCTAATGTGCAATTTGTTTGCC
CCTTCGCCGTTGAGTCTCTCGTAAAAGTGTTTTACAATGGAtggtttttc
tgatttcttaGGGATAATCTTTTTTTCGGGGTCAATTAGTTCtttgtttg
ttaattttttcactGGGTTGTACACCTCGAGAGTCTTTACACCTTTTTTG
GATAAGTCAAAAATCATTCTCTCTTGAGCAGTGTAGAGATGAGGAAGTCC
TATTTCGTCGGGATTTTCGAAAATACGAAGAGCTTCATCATAAAACCGAT
CGTCGATTGCCTTTAATCTTGTTTGCTTCTGTTTTCCATTCTGACTTTTC
TTTGACGAATCTTTTTGTCCGTTTCCACTACCCTCTTGCTGTACTTCATT
TTCGCTGTCTCCACTATTACCACTATTTTCTGCATCCGCCtcaaaactgt
catcattagcGCAATTTATGATTAAAACcacataaaaaacaaaaaaatat
atagcaAAACTGTGAATggctttcattttcatctttac Run BLAST on NCBI protein sequence of TCONS_00073130-protein >TCONS_00073130-protein ID=TCONS_00073130-protein|Name=TCONS_00073130-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
VKMKMKAIHSFAIYFFVFYVVLIINCANDDSFEADAENSGNSGDSENEVQ
QEGSGNGQKDSSKKSQNGKQKQTRLKAIDDRFYDEALRIFENPDEIGLPH
LYTAQERMIFDLSKKGVKTLEVYNPVKKLTNKELIDPEKKIIPKKSEKPS
IVKHFYERLNGEGANKLHIRIQTKFHGIPRRYIQTWLNRNKDHCQQKPLF
KNKNRLQPVVSKTVQSHNQIDLVNMESYPITIGDKTYKYILSVLCAFTRF
VQLRPLTSKEPREVLNHLINIYR Run BLAST on NCBI transcript from alignment at scaffold_86:953566..954403 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073130 ID=TCONS_00073130|Name=TCONS_00073130|organism=Clytia hemisphaerica|type=transcript|length=838bp|location=Sequence derived from alignment at scaffold_86:953566..954403 (Clytia hemisphaerica)
gtaaagatgaaaatgaaagccATTCACAGTTTtgctatatatttttttgt
tttttatgtgGTTTTAATCATAAATTGCgctaatgatgacagttttgaGG
CGGATGCAGAAAATAGTGGTAATAGTGGAGACAGCGAAAATGAAGTACAG
CAAGAGGGTAGTGGAAACGGACAAAAAGATTCGTCAAAGAAAAGTCAGAA
TGGAAAACAGAAGCAAACAAGATTAAAGGCAATCGACGATCGGTTTTATG
ATGAAGCTCTTCGTATTTTCGAAAATCCCGACGAAATAGGACTTCCTCAT
CTCTACACTGCTCAAGAGAGAATGATTTTTGACTTATCCAAAAAAGGTGT
AAAGACTCTCGAGGTGTACAACCCagtgaaaaaattaacaaacaaaGAAC
TAATTGACCCCGAAAAAAAGATTATCCCtaagaaatcagaaaaaccaTCC
ATTGTAAAACACTTTTACGAGAGACTCAACGGCGAAGGGGCAAACAAATT
GCACATTAGAATACAGACCAAATTCCACGGCATTCCGAGAAGATATATTC
AAACATGGTTAAACAGAAATAAAGATCATTGTCAACAGAAACCCCTTTTT
AAGAACAAAAATAGGCTGCAACCAGTCGTGTCTAAAACGGTTCAATCACA
TAATCAAATTGATCTGGTTAACATGGAAAGCTATCCAATCACCATTGGCG
ATAAAACGTATAAATATATACTATCTGTTTTGTGTGCTTTTACTCGGTTC
GTGCAGTTACGGCCCTTGACATCGAAAGAACCTCGTGAAGTGCTCAATCA
TCTTATTAATATATACAGGTAAGACAGTTTTCATCATA Coding sequence (CDS) from alignment at scaffold_86:953566..954403 >TCONS_00073130 ID=TCONS_00073130|Name=TCONS_00073130|organism=Clytia hemisphaerica|type=CDS|length=822bp|location=Sequence derived from alignment at scaffold_86:953566..954403 (Clytia hemisphaerica)
gtaaagatgaaaatgaaagccATTCACAGTTTtgctatatatttttttgt
tttttatgtgGTTTTAATCATAAATTGCgctaatgatgacagttttgaGG
CGGATGCAGAAAATAGTGGTAATAGTGGAGACAGCGAAAATGAAGTACAG
CAAGAGGGTAGTGGAAACGGACAAAAAGATTCGTCAAAGAAAAGTCAGAA
TGGAAAACAGAAGCAAACAAGATTAAAGGCAATCGACGATCGGTTTTATG
ATGAAGCTCTTCGTATTTTCGAAAATCCCGACGAAATAGGACTTCCTCAT
CTCTACACTGCTCAAGAGAGAATGATTTTTGACTTATCCAAAAAAGGTGT
AAAGACTCTCGAGGTGTACAACCCagtgaaaaaattaacaaacaaaGAAC
TAATTGACCCCGAAAAAAAGATTATCCCtaagaaatcagaaaaaccaTCC
ATTGTAAAACACTTTTACGAGAGACTCAACGGCGAAGGGGCAAACAAATT
GCACATTAGAATACAGACCAAATTCCACGGCATTCCGAGAAGATATATTC
AAACATGGTTAAACAGAAATAAAGATCATTGTCAACAGAAACCCCTTTTT
AAGAACAAAAATAGGCTGCAACCAGTCGTGTCTAAAACGGTTCAATCACA
TAATCAAATTGATCTGGTTAACATGGAAAGCTATCCAATCACCATTGGCG
ATAAAACGTATAAATATATACTATCTGTTTTGTGTGCTTTTACTCGGTTC
GTGCAGTTACGGCCCTTGACATCGAAAGAACCTCGTGAAGTGCTCAATCA
TCTTATTAATATATACAGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073130-exon-scaffold_86-1491911889:953566..954403 | TCONS_00073130-exon-scaffold_86-1491911889:953566..954403 | Clytia hemisphaerica | exon |
| TCONS_00073130-exon-scaffold_86-1510915933:953566..954403 | TCONS_00073130-exon-scaffold_86-1510915933:953566..954403 | Clytia hemisphaerica | exon |
| TCONS_00073130-exon-scaffold_86-1575043694:953566..954403 | TCONS_00073130-exon-scaffold_86-1575043694:953566..954403 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_86 | supercontig | scaffold_86:953566..954403 . |
Blast
The following BLAST results are available for this feature:
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