TCONS_00072381 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072381
Unique NameTCONS_00072381
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length134

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072381 ID=TCONS_00072381|Name=TCONS_00072381|organism=Clytia hemisphaerica|type=transcript|length=134bp
gttttcccTCGCTGGAAAGTCATTCCACTTTTACGGTCTGGAAGCCCGAG
GACTTTGTATTCAGATTGTCCCTTAGAACCAAACAACATTATGGAGACAT
TGGAGCTGGTACCAGCATCGTCATCGTTCCCTGT
Run BLAST on NCBI

transcript from alignment at scaffold_77:452438..452735+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072381 ID=TCONS_00072381|Name=TCONS_00072381|organism=Clytia hemisphaerica|type=transcript|length=298bp|location=Sequence derived from alignment at scaffold_77:452438..452735+ (Clytia hemisphaerica)
gttttcccTCGCTGGAAAGTCATTCCACTTTTACGGTCTGGAAGCCCGAG
GACTTTGTATTCAGATTGTCCCTTAGAACCAAACAACATTATGGAAAGcc
ttttttttgaagaatttcataaaaattgatCAACCCTATAACTCAACTTa
catcaaaaacttttgttttcccTCGCTGGAAAGTCATTCCACTTTTACGG
TCTGGAAGCCCGAGGACTTTATATTCAGACTGTCCCTTAGAACCAAACAA
CATTATGGAGACATTGGAGCTGGTACCAGCATCGTCATCGTTCCCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044943XLOC_044943Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072381-exon-scaffold_77-1491911889:452438..452524TCONS_00072381-exon-scaffold_77-1491911889:452438..452524Clytia hemisphaericaexon
TCONS_00072381-exon-scaffold_77-1510915933:452438..452524TCONS_00072381-exon-scaffold_77-1510915933:452438..452524Clytia hemisphaericaexon
TCONS_00072381-exon-scaffold_77-1575043694:452438..452524TCONS_00072381-exon-scaffold_77-1575043694:452438..452524Clytia hemisphaericaexon
TCONS_00072381-exon-scaffold_77-1491911889:452689..452735TCONS_00072381-exon-scaffold_77-1491911889:452689..452735Clytia hemisphaericaexon
TCONS_00072381-exon-scaffold_77-1510915933:452689..452735TCONS_00072381-exon-scaffold_77-1510915933:452689..452735Clytia hemisphaericaexon
TCONS_00072381-exon-scaffold_77-1575043694:452689..452735TCONS_00072381-exon-scaffold_77-1575043694:452689..452735Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:452438..452735 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072381 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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