|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000762 ID=TCONS_00000762|Name=TCONS_00000762|organism=Clytia hemisphaerica|type=transcript|length=364bp
AGAGAGCGATCATGAAGACATGTTATTCTTTACAAAGAAAGTTTCAAACC
ACGACGTTGTTGGTGTCAAGTTCTTCTACTTCGTCTATCTCCTCTCTCAT
CCAACGTATTCGAAAAAAGAGGGACAGGAAACTATTGATCGTTTCAACTT
ATTATGGTTATTGCTCAACGACTTCTATATCATATGATTGGATAGATTGG
ACACTCTTTATTGGTGCGAAAGGTGAAAGAATTTGGTTAGAGGTGTGAAA
AGCATGCATTTTGTTGGTCTGGTGAGATGACACCTCGTGCACATCCGCAT
CCGCATATGAGAATCATCAATTACAAACGATACAAGAGAGTTTACAGCGG
TCACTGGTGGTAAG Run BLAST on NCBI transcript from alignment at sc0000005:130066..133804- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000762 ID=TCONS_00000762|Name=TCONS_00000762|organism=Clytia hemisphaerica|type=transcript|length=3739bp|location=Sequence derived from alignment at sc0000005:130066..133804- (Clytia hemisphaerica)
AGAGAGCGATCATGAAGACATGTTATTCTTTACAAAGAAAGTTTCAAACC
ACGACGTTGTTGGTGTCAAGTTCTTCTACTTCGTCTATCTCCTCTCTCAT
CCAACGTATTCGAAAAAAGAGGGACAGGAAACTATTGATCGTTTCAACTT
ATTATGGTTATTGCTCAACGACTTCTATATCATATGATTGGATAGATTGG
ACACTCTTTATTGGTGCGAAAGGTATGCAAAATGTCCATCAATTCAAGAA
ATTCTCGGTTATGGTTTTTATAGGCTTCTGCTCATCCTCTAGCGNTCGTG
TTCTTTTAGAATAGTTCTTATAAAAAAGAGCGCGAAGGATGATAACACCG
CCTCTGAGATCATATACACAGTATGCATTAATTTCCCTTTCGTGTAAAAA
CATTCTGTCGTTGCGTGCTCGTTTAGATCTCCACCGAGGGTCAGTTTGTT
CCCCTTTCTTCAAGGAAATCGTGGGTGTCAAATTTTCATAAAATTACGAC
CATTATTTTCGATGTTCTACGCATCTAGTTATTTGTTCATAGAATAATTT
AGAATTTTTTTGGTCCTGTCACCTCGTTAACGATCCTTTGTTATGCAATC
ATTGCATTCTTATAGTAAGAGAGTTCGATGTTGTTACCTACTTACATAAG
ATACTACTAATGAGGAGTCAACCTTTTCGTGGAGGCGAGTGGAGAAAAAA
TTGTAAAATATGCATTACTACGCAATTTAAAAAGCATGTGACCTAAAGAA
AATCAAGTCTCATTCAAAAGAAAGTTTTTAGTCTCTGTTTCAAGCACTCA
GGTTTGTACTTGTCATGAAATATTTTTGATTTCTTTAGATCTAATTGGTG
TTGAACTGTATTGACCGTTCGTAATGATGAAAATGAACTACAATAGCTTT
ACAAATACATGGAGTAAAAATGAAGCGACACTTTGCGAAGTAAAGGTATG
AAAATGAATCGATCACTTGAACTCGATTTGGTGCCATAACTTAACACTTT
TTGAAGTATTAAAGTACTTTTTTGACAACATTTAAGTCATCAGTTTTTAT
GGAATCATTGCAGAATTGTATACCACACTAATCTTATAAGAACATCTTTT
CCTTCAAATTCTTGAAAAATAATTTTCAAGACTTTGTATCCAATCAGGTT
TGAATCAAGGTTAAATCTTTGAAATCAGCAAAAGTACTGGCGAAGTAAAT
TTGTATTTTTTGGTACGGTGCATTATATCGAGGCTGTAAGAAAGATGTAC
TGAAAGGGCAACAACCCCCCCTACGTTCTTACAGAAAAAGGTACCCCTAA
AAAGACAATACATTCACAAAAATGTTGTTGACACTTAAACAAACATTTCA
CTTCCTTTACCTCTTAGAGAGAGAGCGATCATGAAGACATGTTATTCTTT
ACAAAAAAAAGTTTCAAACCACGACGTTGTTGGTGTCAAGTTCTCTGCTT
CGTCTACCTCCTCTCGCTCATCCAACGTATTCGAAAAAAGAGGGACAGGA
AACTATTGATAGTTTCAACTTATTGATATTTTTCAAGAGAGTGGTTATTG
CTCAACGACTTCTATATCATATGATTAGATAGATTGGACACTCTTTATTG
GTGCGAGAGGTATGCAAAATGTCCATCAATTCAAGAAATTCTCGGTTATG
GTTTTTATAGGCCTGCTCATCCTCTAGCGAAAAAGGTTTCTATATAGGAA
GCATATCTAGACTATGGTTTTTATACAGGAAATTTTCTATATTTTCCGAA
ATTTGGAGAATATTATTGCTTTTTGGACCTACCCCGGTGGGGTGGAGGTC
CTATAAATTAACCCATGTTCGTTAGTTAGAACGTTAGTTACCAACTTTTC
TCGAGATTGGCTCATTCAATTTTTCTGATTTTTTGCACAAAGGTGCATTA
CTATAAACCCTCGAATGTGACGGAGCCCGATNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTCTTTCACCGTTAAACATCGATGCGTTTCTTAATT
GCTTTCTCCGTTCCAATAGATATATAAATCGAAATTTAAAATTATACATT
ACTTCCATTAAATTGTAATTATTCGTTTTATAAATAGGTAGGTCCATTAA
AGTATTACTTGTTATCGAACGGAATCAAATGAAAATCTTATTTGTGTATT
CGTATCCCGATACTGGGTATTATCCATCGTACATTGTTTTCTTAAAGGTG
AAAGAATTTGGTTAGAGGTGTGAAAAGCATGCATTTTGTTGGTCTGGTGA
GATGACACCTCGTGCACATCCGCATCCGCATATGAGAATCATCAATTACA
AACGATACAAGAGAGTTTACAGCGGTCACTGGTGGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000762-exon-sc0000005-1575043694:133583..133804 | TCONS_00000762-exon-sc0000005-1575043694:133583..133804 | Clytia hemisphaerica | exon |
| TCONS_00000762-exon-sc0000005-1575043694:130066..130207 | TCONS_00000762-exon-sc0000005-1575043694:130066..130207 | Clytia hemisphaerica | exon |
| TCONS_00000762-exon-sc0000005-1510915933:133583..133804 | TCONS_00000762-exon-sc0000005-1510915933:133583..133804 | Clytia hemisphaerica | exon |
| TCONS_00000762-exon-sc0000005-1510915933:130066..130207 | TCONS_00000762-exon-sc0000005-1510915933:130066..130207 | Clytia hemisphaerica | exon |
| TCONS_00000762-exon-sc0000005-1491911889:133583..133804 | TCONS_00000762-exon-sc0000005-1491911889:133583..133804 | Clytia hemisphaerica | exon |
| TCONS_00000762-exon-sc0000005-1491911889:130066..130207 | TCONS_00000762-exon-sc0000005-1491911889:130066..130207 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005 | supercontig | sc0000005:130066..133804 - |
Blast
The following BLAST results are available for this feature:
|
