TCONS_00072344 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072344
Unique NameTCONS_00072344
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072344 ID=TCONS_00072344|Name=TCONS_00072344|organism=Clytia hemisphaerica|type=transcript|length=156bp
CGATGGCCAATCGATAGGaacgtaaaattttattatcgaTTGGTATCGAT
TTTCATCGATTAaattcgattattatcgattagccatcgattgaattcga
ttgttatcgattaAGATCGATTGCGATCGATTGTGCTAATTTTCTGTATG
TATGAT
Run BLAST on NCBI

transcript from alignment at scaffold_76:210633..210788

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072344 ID=TCONS_00072344|Name=TCONS_00072344|organism=Clytia hemisphaerica|type=transcript|length=156bp|location=Sequence derived from alignment at scaffold_76:210633..210788 (Clytia hemisphaerica)
ATCATACATACAGAAAATTAGCACAATCGATCGCAATCGATCTtaatcga
taacaatcgaattcaatcgatggctaatcgataataatcgaattTAATCG
ATGAAAATCGATACCAAtcgataataaaattttacgttCCTATCGATTGG
CCATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044924XLOC_044924Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072344-exon-scaffold_76-1491911889:210633..210788TCONS_00072344-exon-scaffold_76-1491911889:210633..210788Clytia hemisphaericaexon
TCONS_00072344-exon-scaffold_76-1510915933:210633..210788TCONS_00072344-exon-scaffold_76-1510915933:210633..210788Clytia hemisphaericaexon
TCONS_00072344-exon-scaffold_76-1575043694:210633..210788TCONS_00072344-exon-scaffold_76-1575043694:210633..210788Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_76supercontigscaffold_76:210633..210788 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072344 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top