TCONS_00072003 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072003
Unique NameTCONS_00072003
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072003 ID=TCONS_00072003|Name=TCONS_00072003|organism=Clytia hemisphaerica|type=transcript|length=124bp
AATCGATTGATTCGACTGTCGATTTCGTTCAATGTGACAAAGtctgactt
tttctttttttaaataaattttaatatgaaaaataaagattaaaTACACA
TATAGTCTTGTAATatattaaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_66:88714..88837

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072003 ID=TCONS_00072003|Name=TCONS_00072003|organism=Clytia hemisphaerica|type=transcript|length=124bp|location=Sequence derived from alignment at scaffold_66:88714..88837 (Clytia hemisphaerica)
tttttaatatATTACAAGACTATATGTGTAtttaatctttatttttcata
ttaaaatttatttaaaaaaagaaaaagtcagaCTTTGTCACATTGAACGA
AATCGACAGTCGAATCAATCGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044703XLOC_044703Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072003-exon-scaffold_66-1491911889:88714..88837TCONS_00072003-exon-scaffold_66-1491911889:88714..88837Clytia hemisphaericaexon
TCONS_00072003-exon-scaffold_66-1510915933:88714..88837TCONS_00072003-exon-scaffold_66-1510915933:88714..88837Clytia hemisphaericaexon
TCONS_00072003-exon-scaffold_66-1575043694:88714..88837TCONS_00072003-exon-scaffold_66-1575043694:88714..88837Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_66supercontigscaffold_66:88714..88837 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072003 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top