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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071180 ID=TCONS_00071180|Name=TCONS_00071180|organism=Clytia hemisphaerica|type=transcript|length=1610bp
AGAAAACTGAAGAAAAGACTGTGACAGCACACTCACACTCTAAattttga
caaacttttttctgaaaaacaaACTCAAGACTTGCAATTTCCATGAACGT
CCTCTGGATAAACTGATAAAGTTATTAAATTTATTATAAAGGTTTTAAAA
GAGAAGAGCAGAAGAAGGagttatatttttaaagaactcttttATGTCTT
TTACAAGATCAAAAAGTTCAATAGCCATGTCCATGAAACGATCTGTCATT
TATTTGTTCCAAAACGATTTACGACTTCATGACAATGAATGCTTAAAGAT
TGCTCAAAGTAAAGGGAATTTCTTGATTCCCTTATATTGTTTCCAGCCCA
ACCATTTCAAGGGAACGTATAGCTTTAACTTGCCAAGAAGTGGTACACAC
AGAACAAAATTTCTCATTGAAAGCATCACTGATCTACGTGCTAATCTACA
AAAACTTGGTTCAAACTTAGTTGTTCGAAATGAATCTCCACTGTCAGCCA
TCAAAGACTTGGTAAAACTTTGTCAAAATTCTGAAGCACCTGTCTCCTCC
ATCATTTATCAAAAAGAAGTGACTTCAGAAGAGattgatttagaaaaaca
aatcaaatcttTCTGCAAAGAACAAAGCATTGAAGACTACCCTGTTTGGG
GTTTGTCATTGTTTCACAAAGATGACATTCCATACAATAAGAAGACCATC
CCAGATACATATTCCAAGTTTCGTCAAGGAGTAGAATCTAAAAGCGAAAT
TCGTGATTTAATTCCTACACCACTAACCCTTAATAAACTGCCACCTATCA
AAGGTGCCAGTCTTGGTGATATCCCTACAATGGAGAAGTTGATCGGTGTT
CAAAGCTATATACAAGATAACAGAACAGCTGTTCCACTAGAAGGTGGTGA
AAGTGCTGGCTTGAAACATCTCCAAAAATATCTTTGGGACACTGATGCCA
TTTCAACTTACAAAGAAACCAGGAATGGTCTATTAGGAGAAGAATACTCG
ACCAAGTTTAGTATCTGGCTTGCTAATGGTTCTTTATCTCCAAGACAGAT
CTACCATGAAGTCAAGAGATATGAAAATCAACGTGTATCCAACCAATCCA
CTTACTGGAGTATCTTTGAACTGATCTGGAGAGATTACTTTAAATTTGTA
TGTTGGAAATATGGGAGAAAAGTGTTCTATTTATCTGGCATCATGGGCAA
ACATTTACCTTGGAAACAAGACAAAATTGCTTTTCAGAAATGGTGTCAAG
GTGAGACAGGTGTTCCTTTTGTTGACGCAAATATGAGAGAGTTACTTCAT
ACAGGCTGGATGTCAAATCGGGGTCGTCAAAACGTGGCTAGTTTCTTGGT
CAAGGACTTGAAATTAGACTGGCGTCTTGGAGCCGAATGGTTCGAATCAC
AACTTCTTGATCATGATGTTTGCAGTAATTATGGTAATTGGAATTATTCA
GCTGGCATTGGTAATGATCCAAGACAAGACCGTAAATTCAATATGATCAA
ACAAGCTCTTGATTATGATGCTGAAGGAAAATTTGTGAAAACTTGGGTTC
CAGAGCTTACCAATCTTCCTGCTAACAAGATCCATGTACCTTGGACCATT
CCTGACCGAG Run BLAST on NCBI transcript from alignment at scaffold_6:242609..250932- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071180 ID=TCONS_00071180|Name=TCONS_00071180|organism=Clytia hemisphaerica|type=transcript|length=8324bp|location=Sequence derived from alignment at scaffold_6:242609..250932- (Clytia hemisphaerica)
AGAAAACTGAAGAAAAGACTGTGACAGCACACTCACACTCTAAATTTTGA
CAAACTTTTTTCTGAAAAACAAACTCAAGACTTGCAATTTCCATGAACGT
CCTCTGGATAAACTGATAAAGTTATTAAATTTATTATAAAGGTTTTAAAA
GAGAAGAGCAGAAGAAGGAGTTATATTTTTAAAGAACTCTTTTATGTCTT
TTACAAGATCAAAAAGTTCAAGTAAGTAGGGAGATGTTTTGTTTTTTATT
TTATTTAGCTAAGTATGGGAATTTTCAAAATGCTTGCAACGTTACAAATC
ATTTTCAGAAGCTCATTTTGGTTTGGGCTCAAACGAAGCGTATACCGTTG
TGAGAGTGGGTAACTTGCATCAGTGGAGGCTAACATGCATAGCCGCCCTC
AGATGAAAGATCTGGCTGGTCATTAAAATACAACTACGCAGCTCCGCTCG
CAGCTCTACTCTACCATTTTTGTTTTGATTTAACTTTGTACAGTCAGGCA
CATCCTGGCAAATGAACAGGGTATTTTTCATTTGCGATTGGTGGCAAATG
CAAGGGGTCGAAAACAAAAGTGATGTAATAGCACTGAATACCCCACGCAA
TTGAACTGGGTTGGAAATATTTTGCTTCATTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCTTTCATTTGAGGGCTATGCATGTTAGCCATTAGCCTGCCTCC
ACTGATGCAAGTTACCCAATCTCACGGTATATAACTAAGAGTAAGATTCA
GTCTAGGCCAGATGTCTTTTTTATATTTTGATATTTTGCGTAATTCATAA
AAATCCTCAATTTTGTGCTACGTGGGATGATTGGTCTGTTAAATCTCTTT
GACAACAAATTTATCAATCAGTAGCTTCCACAGAGTGCAGATGTCTTGAA
TTTGGGACTTTGGATGTCAATATACCAGAATATACCGTGAAGTCGGGTAA
CTTGCATCAGTGGAGGGAAACTTGCATAGCCATCAAATGACTGACCAATC
AAAAGCAGCAAAATTTCAAAACAAATGAACTGCGCAGCTTCACTCGCAGC
TCTACTCTACCATGCCATTTTTGTTTCGATTTAATTTTGTATTTTAATGA
CCAGCCCGGGTCATTCATTTGAGGGGTATGCATGTTATGTTAGCCTCCAC
TGATGCAAGTTACCCGATCTCACGGTATATCTTGGGATAGAATTACCGTT
GACAACTTTGACTTGAATTTTCCAAATGATTTTCATGATAGCTATGCCCT
GACAAAGTTTCATTTTTTGTGCCGAAATCCCTTTAAATCACAATTTTTTC
TGGTCCTTATTAAAGACAATGTCTGGGTAAAGGGAGTGACAGATAAGGCT
GCGGCGTCCCATGCAGAGTCAGATAAATAAAAGCCATTTATTTGTGCAAT
GATATCCTCCAAACAAAATGTTTGAAAATGATTGAAAGTTGTTTTGAGCT
GCTTCACATTCTATTGCTTTAAAACAATAAAATTAATTGTAAAGTTGATT
TTGAATAAATTTGAATTGAATTCATAGGTTGCAGAGGGCTATGAACCCCT
AGGTTTATTTCACCCCATATATACACCCCCTGCGCTCTATGCACCACTAA
AAGTGATTACAGAGTACAAGATTTATAGTCACAAGTCAAAAATTAACAAT
ATAACAATATAACTAGTGTTGTTTGGTGGTAAATATTTTTACCATTTTGT
ATGATTGAAATGATCATAATTTCCAAATCCCCTTATCTTATTTGACCCCT
CTAACATTCCCATACCTGCTACGAAAGACTGCTGTACGCAATGTTTTTTT
ATATACAAAGACAAAGCAAATATACATATGCTGCTCTGCCACCCAAATTT
CCTGAGTAAATATAGTTTGACAGAAATTCTTGATTTCTTCACATATATTG
GTCTAATGTTGACATCCCTTATCAAATTCTGACACATTTCTTTATAGTTA
TGGGAATAAAAGGAAGGTCAGAATTGCTGAGATTTTTTATCCAAAATGCT
TTGGGGGTAGTCTGGAGACAAAAAGAAAGATATGTTTGTAAATTTAACGA
GTAATTAGCTTGTATAACTTGATCATGAGTTAGTATCAATGCGTGACAGA
GTAAATAATCTCGAACCAACTTATACTTATGACTCTTCATTCATCAAGTA
AGAGTGTCAAATGATATTGGAAAATACAAAAAAATTCACACAGTCATAGC
CATCTCATTTTGACCACAAGGACTTATGGATCACAAAAATTGACAGTTTC
AAAATTTTTTTGAAACAATTTTTTCTAACACAAACCACAATCTTTTTTAA
CTGAGATGACAAGAGAATTACAAATTACACCCCTGTCTCACAGCCCCGGT
GGAACTTCTTCTCACAGTACAGTAGTGGGAATAAAAATTTATATCGAAAT
CCCAGGGGTAAAGAAATTCTAATTGTTCCCAGGTCAAAAAAATCCAGTAG
GGATGGTTTTGGAGTACAATTTTTTTCAATTGAGTTTCAATTGGGGATGA
AAATTAAATCAATTTTCCAGTAGGGCTGAAATTGTAGTAGGGTATTTTCC
CCAACCGGGACANGAAAATTAAATCAATTTTCCAGTAGGGCTGAAATTGT
AGTAGGGTATTTTTCCCAACCGGGACGAAATTTTAGCCAAATTTTTCAGA
GGAAAGGAAGTCCTACTTGGTTTGTGAACAGAGGGTGTCTTATTGGCATG
TCATACTTTTGAGTTGTGTTTCACACTGTATTTTTTATTTGTAGTAGCCA
TGTCCATGAAACGATCTGTCATTTATTTGTTCCAAAACGATTTACGACTT
CATGACAATGAATGCTTAAAGATTGCTCAAAGTAAAGGGAATTTCTTGAT
TCCCTTATATTGTTTCCAGCCCAACCATTTCAAGGTAAACTTTTCTTAAT
ACTTTGTACTATGCAAAGATCTAGCTGTTACATTCTTTTATTTAAAAATG
AAAAAAAAAATCTGCACTGTTTAAAGGAAAATNAGTCAAGTCTAAAAAAG
TAAGAATATGTTAAGAATATTTTGGCACTTTCTTAAAAATACTTGACCCT
CATCCAAAGTACACTATTCTTATAAAAAAAAAGAAAATTGTAAAAATTTT
TAAAACCCAGAAATTATCCCAAACTCACTTTTCTCTAACTCTCTTTTTTA
TAGGGAACGTATAGCTTTAACTTGCCAAGAAGTGGTACACACAGAACAAA
ATTTCTCATTGAAAGCATCACTGATCTACGTGCTAATCTACAAAAACTTG
GTTCAAACTTAGTTGTTCGAAATGAATCTCCACTGTCAACCATCAAAGAC
TTGGTAAAACTTTGTCAAAATTCTGAAGCACCTGTCTCCTCCATCATTTA
TCAAAAAGAAGTGACTTCAGAAGAGATTGATTTGNTACTTCATACAGGCT
GGATGTCAAATCGGGGTCGTCAAAACGTGGCTAGTTTCTTGGTCAAGGAC
TTGAAATTAGACTGGCGTCTTGGAGCCGAATGGTTCGAATCGCAACTTCT
TGATCATGATGTTTGCAGTAATTATGGTAATTGGAATTATTCAGCTGGCN
GACTACCCTGTTTGGGGTTTGTCATTGTTTCACAAGTAAGTTTCAGTCTC
CTCTCTGTGAATTCGGTATGATGTCAAATTTAATAGAGTTTCCTCATTTT
TCTTAGTATTTTTTCTCTGACATATTTTTTTCTGTTGATAAAATTACTTA
GTTTTATCAAATATTCGTTTCGGTTTCGAGCATAAATTAAGGAAGATAGG
CTCCTACTCCTAAGGCCTAAAAGCCTGGAGCTGTCTATTGTGTAGACTAG
TTTGAATCATGCTCTCTCTATGTTAGCATAGTTATTTGATTTTATTGTTC
TTATACTTTTAGAGATGACATTCCATACAATAAGAAGACCATCCCAGATA
CATATTCCAAGTTTCGTCAAGGAGTAGAATCTAAAAGCGAAATTCGTGAT
TTAATTCCTACACCACTAACCCTTAATAAACTGCCACCTATCAAAGGTGC
CAGTCTTGGTGATATCCCTACAATGGAGAAGTTGATCGGTGTTCAAAGCT
ATATGCAAGATAACAGAACAGCTGTTCCACTAGAAGGTGGTGAAAGTGCT
GGCTTGAAACATCTCCAAAAATATCTTTGGGACACTGATGCCATTTCAAC
TTACAAAGAAACCAGGAATGGTCTATTAGGAGAAGAATACTCGACCAAGT
TTAGTATCTGGCTTGCTAATGGTTCTTTATCTCCAAGACAGATCTACCAT
GAAGTCAAGAGATATGAAAATCAACGTGTATCCAACCAATCCACTTACTG
GAGTATCTTTGAACTGATCTGGAGAGATTACTTTAAATTTGTATGTTGGA
AATATGGGAGAAAAGTGTTCTATTTATCTGGCATCATGGGCAAACATTTA
CCTTGGAAACAAGACAAAATTGCTTTTCAGAAATGGTGCCAAGGTGAGAC
AGGTGTTCCTTTTGTTGACGCAAATATGAGAGAGTTACTTCATACAGGCT
GGATGTCAAATCGGGGTCGTCAAAACGTGGCTAGTTTCTTGGTCAAGGAC
TTGAAATTAGACTGGCGTCTTGGAGCCGAATGGTTCGAATCACAACTTCT
TGATCATGATGTTTGCAGTAATTATGGTAATTGGAATTATTCAGCTGGTA
TTGGTAATGATCCAAGACAAGACCGTAAATTCAATATGATCAAACAAGCT
CTTGATTATGATGCTGAAGGAAAATTTGTGAAAACTTGGGTTCCAGAGCT
TACCAATCTTCCTGCTAACAAGGTCCATGTACCTTGGACTATTCCTGACC
GGGAGCTACAAAGATTGGAGTTCTCATTAGGGCAGGACTACCCAAAGCCT
ATGGTAATGGCACCTGAGTGGGGCCGACATACACATAAAACGAACGGTAA
AGCATTTCAAAAGAATGCAGAAAAGCCTCAAAGAGGGATTGATTTTTATT
TTAAATCACCAGATGCTGGCCCAAGTGGTCAGGGTTCTGCTGGAGGAAAG
AAAAACAAAAGGCGTTAAAATAATCAAATCTATGACGACGTACCGTTGAA
ATTTTTAAGATTGGAAATCAAAATCTTTAGTGTGTTCTTAGTATGTTGTG
ATATCTGACAGGTCAGATTTACCCTTACTACTACTCAGTGCTGTGTTGTA
TAGTAAAGTGAAAACATAAAATACAGTATGCAAGCTAACTTGTTTTGATT
TTGAACGGTTGATACCACACATTTATAAAGCCCGAAGGGCTAGATGTCGT
GCTTTAAGCTCTTCTAAGCAAAAAAAAGTGAATATCGCAAAAAGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGA
ATATGTTAAGAATATTTTGGCACTTTCTTAAAAATACTTGACCCTCATCC
AAAGTACACTATTCTTATAAAAAAAAAGAAAATTGTAAAAATTTTTAAAA
CCCAGAAATTATCCCAAACTCCCTTTTCTCTAACTCTCTTTTTTATAGGG
AACGTATAGCTTTAACTTGCCAAGAAGTGGTACACACAGAACAAAATTTC
TCATTGAAAGCATCACTGATCTACGTGCTAATCTACAAAAACTTGGTTCA
AACTTAGTTGTTCGAAATGAATCTCCACTGTCAGCCATCAAAGACTTGGT
AAAACTTTGTCAAAATTCTGAAGCACCTGTCTCCTCCATCATTTATCAAA
AAGAAGTGACTTCAGAAGAGATTGATTTAGAAAAACAAATCAAATCTTTC
TGCAAAGAACAAAGCATTGAAGACTACCCTGTTTGGGGTTTGTCATTGTT
TCACAAGTAAGTTTCAGTCTCCTCTCTGTGAATTCGGTATGATGTCAAAT
TTAATAGAGTTTCCTCATTTTTCTTAGTATTTTTTCTCTGACATATTTTT
TTCTGTTGATAAAATTACTTAGTTTTATCAAATATTCGTTTCGGTTTCGA
GCATAAATTAAGGAAGATAGGCTCCTACTCCTAAGGCCTAAAAGCCTGGA
GCTGTCTATTGTGTAGACTAGTTTGAATCATGCTCTCTCTATGTTAGCAT
AGTTATTTGATTTTATTGTTCTTATACTTTTAGAGATGACATTCCATACA
ATAAGAAGACCATCCCAGATACATATTCCAAGTTTCGTCAAGGAGTAGAA
TCTAAAAGCGAAATTCGTGATTTAATTCCTACACCACTAACCCTTAATAA
ACTGCCACCTATCAAAGGTGCCAGTCTTGGTGATATCCCTACAATGGAGA
AGTTGATCGGTGTTCAAAGCTATATACAAGATAACAGAACAGCTGTTCCA
CTAGAAGGTGGTGAAAGTGCTGGCTTGAAACATCTCCAAAAATATCTTTG
GGACACTGATGCCATTTCAACTTACAAAGAAACCAGGAATGGTCTATTAG
GAGAAGAATACTCGACCAAGTTTAGTATCTGGCTTGCTAATGGTTCTTTA
TCTCCAAGACAGATCTACCATGAAGTCAAGAGATATGAAAATCAACGTGT
ATCCAACCAATCCACTTACTGGAGTATCTTTGAACTGATCTGGAGAGATT
ACTTTAAATTTGTATGTTGGAAATATGGGAGAAAAGTGTTCTATTTATCT
GGCATCATGGGCAAACATTTACCTTGGAAACAAGACAAAATTGCTTTTCA
GAAATGGTGTCAAGGTGAGACAGGTGTTCCTTTTGTTGACGCAAATATGA
GAGAGTTACTTCATACAGGCTGGATGTCAAATCGGGGTCGTCAAAACGTG
GCTAGTTTCTTGGTCAAGGACTTGAAATTAGACTGGCGTCTTGGAGCCGA
ATGGTTCGAATCACAACTTCTTGATCATGATGTTTGCAGTAATTATGGTA
ATTGGAATTATTCAGCTGGCATTGGTAATGATCCAAGACAAGACCGTAAA
TTCAATATGATCAAACAAGCTCTTGATTATGATGCTGAAGGAAAATTTGT
GAAAACTTGGGTTCCAGAGCTTACCAATCTTCCTGCTAACAAGATCCATG
TACCTTGGACCATTCCTGACCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071180-exon-scaffold_6-1575043694:250712..250932 | TCONS_00071180-exon-scaffold_6-1575043694:250712..250932 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1575043694:247199..247338 | TCONS_00071180-exon-scaffold_6-1575043694:247199..247338 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1575043694:243827..244134 | TCONS_00071180-exon-scaffold_6-1575043694:243827..244134 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1575043694:242609..243549 | TCONS_00071180-exon-scaffold_6-1575043694:242609..243549 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1510915933:250712..250932 | TCONS_00071180-exon-scaffold_6-1510915933:250712..250932 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1510915933:247199..247338 | TCONS_00071180-exon-scaffold_6-1510915933:247199..247338 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1510915933:243827..244134 | TCONS_00071180-exon-scaffold_6-1510915933:243827..244134 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1510915933:242609..243549 | TCONS_00071180-exon-scaffold_6-1510915933:242609..243549 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1491911889:250712..250932 | TCONS_00071180-exon-scaffold_6-1491911889:250712..250932 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1491911889:247199..247338 | TCONS_00071180-exon-scaffold_6-1491911889:247199..247338 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1491911889:243827..244134 | TCONS_00071180-exon-scaffold_6-1491911889:243827..244134 | Clytia hemisphaerica | exon |
| TCONS_00071180-exon-scaffold_6-1491911889:242609..243549 | TCONS_00071180-exon-scaffold_6-1491911889:242609..243549 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:242609..250932 - |
Blast
BLAST of TCONS_00071180 vs. Swiss-Prot (Human)
Match: CRY1 (Cryptochrome-1 OS=Homo sapiens GN=CRY1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.696e-37 Identity = 130/471 (27.60%), Postives = 208/471 (44.16%), Query Frame = 2
Query: 233 MKRSVIYLFQNDLRLHDNECLKIAQSKGNFLIPLYCFQPNHFKGTYSFNLPRSGTHRTKFLIESITDLRANLQKLGSNLVVRNESPLSAIKDLVKLCQNSEAPVSSIIYQKEVTSEEIDLEKQIKSFCKEQSIEDYPVWGLSLFHKDDI-PYNKKTIPDTYSKFRQGVESKSEIRDLIPTPLTLNKLPPIKGASLGD-------IPTMEKLIGVQSYIQDNRTAVPLEGGESAGLKHLQKYLWDTDAISTYKETR---NGLLGEEYSTKFSIWLANGSLSPRQIYHEVKRYENQRVSNQSTYWSIF-ELIWRDYFKFVCWKYGRKVFYLSGIMGKHLPWKQDKIAFQKWCQGETGVPFVDANMRELLHTGWMSNRGRQNVASFLVK-DLKLDWRLGAEWFESQLLDHDVCSNYGNWNYSAGIGNDPRQDRKFNMIKQALDYDAEGKFVKTWVPELTNLPANKIHVPWTIPD 1606
M + ++ F+ LRLHDN LK + + +Y P F G+ + G +R +FL++ + DL ANL+KL S L V P L K ++ SI Y E +E D IK E +E +L+ D I N P TY +F Q + SK E + IP +++ L D +P++E+L + D ++ GGE+ L L+++L ++ ++ R N LL T S +L G LS R Y ++ + N S S++ +L+WR++F R + +PW ++ A KW +G TG P++DA M +L GW+ + R VA FL + DL + W G + FE LLD D N G+W + + + + + D G +++ ++P L PA I+ PW P+
Sbjct: 1 MGVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDP-WFAGSSNV-----GINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL---SIEYDSEPFGKERD--AAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRF-QTLISKMEPLE-IPVETITSEVIEKCTTPLSDDHDEKYGVPSLEEL----GFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLAS--PTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPE 452
The following BLAST results are available for this feature:
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