TCONS_00071039 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071039
Unique NameTCONS_00071039
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4283

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071039 ID=TCONS_00071039|Name=TCONS_00071039|organism=Clytia hemisphaerica|type=transcript|length=4283bp
AGAGTATATTAATATGAAAAGGGAAatgattcttatttttttggtgaCCT
CATTGCTGTTAGCTGACTTTTCATTAGGTGAAGAGACATGCTGTGAGAAA
AATAACTTCAGAGAACGATGTCATTTCTTGTGTGACAAGTCAGAATCAAC
ATTTTGGGATCAATTGGCTTGTGCGAAAGAACGAATTAAAGTCATCTCct
gtaaaacaaaagaaaAGTATGATTTGGCAAAACTTTATGGTGATAAATTT
ACAGATACTGTTTCTCAAGGATGGGAGAAGCTGGCAACTAACGTTAAAGA
CAAACTGGCAGACGCAAAAGAGTTCTCAACCTTGTCTGTGAATGAATTGA
AGTCTCTACATCAGGACTTACTCAGTAGCCTGAGTACAATTAAAGGCTTA
ACATCATCACAACTAGGAGGTATCATGAGTAAATTTACGCAATACACAAA
AGAAAATCTACATCAACTTGTACAGAAAATTGATATTGATGTTTTATACT
CCAAGATCAAAACAATGGCTAGCTACACATGGGATAAATCACAACTTGGA
GTGATAGCTGAGACTGCTTTCAAGAAATATGGCGCAAATGTTGAACAATG
GTCAAGTGATAATTTGAGGAATCTGGGACGCTTTTTGTCAGGGTTGCCAA
CAAAagtgttttcaaagttttctgaTGAAGCTTTCAAGGAAAGCTTGCAA
GATTTCTGTGATGCTTCTCTCCCTACAGAGAAGAAATCAAAACTGATTGC
AACAGCAGACAGGGTCTTTGGAGATAAAAACACTTGGAATAGCACAACTA
TTGGCAAACTTTGCAACATTATCGAAGCTCTCACACCTCAAGAATTCCTT
ATTTTGAAAGCTAAAGAGGTTGAAGAATCCCTGAATTCATTGTCGCAGAG
GTTTCTCACACAAGAACAAAAGGAGGTTGTACTGAAAAAGCTGAAAGAAA
ATTGGGGAAAATTCTCTGCCTGGTCAAAAGTCAATTTATCGAAAGCCAAG
GACTTTTTAGAAGGACTTGATGTTGAAGATTTTAAAGAGCTtgacaaaga
caaaataaagGAGATTTTGGATTCCGGCAGAATAAAGTTCATGAACAAGG
TGCAGCAAAGTGCTTTGTATGAGGAAATCATCAAACAACATGGTCCACCT
GAAGATTGGCCCGAATCCATCCTTTCAAACGGGTTGGAGTTGATCCAGTC
AGTGAGTGTAGAGGACTTGCAGAAAATCAAAGCTAAAGCCAAAGCCTCAT
TGATCACAGCTCTGGAGAAAGGGCAGGAAATGGACTGGAGTCGTGATCAA
GCAGAATTTCTTTTGGAGTTGGTTGAAGATGAAGAAGCACTTGCAACATT
CACCAAAGAAAAAGTTGTGCAATTCGGATCCTTACTGAAAGCCTTCTCAC
AATCCGATGCAGGGAGGATCTCCAAAAAAGTGTTGTATGCTGCCTTCCCA
GAGCTGTTTGTGGTCAAAGGAATCGGTGAACCTGTATTACGTTATTTCAT
CAAAGTGTACAAGGAGGAATCATCTAAAGGCGAGATCAAGAATCTTGGTC
AATTTGCCAAAGCCTTGACACGATATGAGATCGAACAACAAGACATTGAA
GATATTCTTGAGAATTTGCAGAAATTGAGTGGGACCGACTTTGATGAAAC
TCAGgcTGCAGAGTTATTGATCAAAATTCGTAAAGAATTGGGAAGCATGG
AGCAATCTGACCACACAGATGCTGATATTTTGCCATGGGGTTTCCAGAAC
ATTCGGAAGATTGGTCAAGTGATTGTTGCATTGACGCGAAAAGAAGCATT
GAAATTCCCTTTCAAAGGAATGGAAAATACTTATGAAGAACTGGGGAAAC
ATGACGGTTGGAAAAGGAGAGTTgTATTGGCTTTTGTGAAAAGAATGAAG
GAGAACTGGGCCCAACAAAACATTACATTGAACGATCTCAAAGAAGTCGA
TATTGAAGTCTTGGGAAAGTTTGTTCAAGGTTTGACTATGGATGATTTGA
ATGAACTATCAGTGGATGTTCAACTGGTGGCTTTCAAACAACTTGGAAAA
TATACTGGTCTTCCTGAAGATAAATTGAAGTCAAGAGCTAATCTCGCTTA
TAAATACTTTGAGAAACAAAGAAGTGGATCACTAACAAGCAATGATTTGC
AAATGATGGGTAACTTGTTACCAGGCCTCTCCCCAGACCTCCTCAGCACA
ATTGATGAACAAAATGTTGTGGAGCACCTCCATAAGTTTACTCAAAGTAC
TTCAAAAGAAAAGCAAGAAGTCTTGTTGAGAAAACTGAAATCTCATTTCG
GTCAAAGTGACGTTGCTAAATGGACAGCCTCACAATGGAACAAAGCATTA
CCATTGGTCGAGAAGATGTCATCCACTCTTGAACTTCGTTTAATGAATAA
TGATGTCTTTCAAGAAATGCTGAATGAACTTGGTCGAATCAAATCGTGGA
GCAAAGATCAAAGTGATGTATTGTTGAACAAAGCGAAAAACGTCTTCGGA
AAAGACATTAGTTCATGGGATTCCAAGATTGTTCACAAAATTGGTTCTAT
CTTCACCAGTTTGGCTTCAGAAGACATTCCCAAGATGAGCAAACAGTTCT
TCGAAAATCTCAATGTTGATGTGTTGGATGGAAAGAACTTTTCTGCTTCT
TTGAAAAAACTCATGTCCAAACAATTTCTCAAGGAATTCACAGACGATGA
CGTCACTAAACTAACATCGAAAATGATGCAACGATTTCATTTCTTGATTT
CTGGATTGGAtgttgaagatttgaagaagtTATCGTTGACCAGTGATGAT
GTGTTGGAGACTTTGAGTAGTGTCTCTGATTGGTCTGAAGATCAGTTGGA
AGTGCTTGGAGAGAAAGCGAAACCGTACATCAACAGTTTCTTTAACGTTG
AAGAAAGAGCTGTCTTTTTCAACCAGTTGGTGAAAGGGCTTCCCTTGGAT
GACATCAAGAAAATGACTACTGCTGTCTTCAATCAAGCCATCAGCAAAGT
GGGATCGATGAACGGCCTCAACAAAGATCAAAAGCAAGCTTTGATGGGAA
AAGCCAAAACTGTTTGGGGAGGTGTTGAGAAATGGAGTGCTTCTCAAATC
AGTGAAGCTAAAGAAATTATTGatgGTTTGGAGCCGAATGATGTGAAAAA
GATCACACCAGAATACATGAGTTTTGTTAGCTCTGATGCCATCACCAACT
TCTCTGACGAACAACTTCAGGCTTTGACAGTTGACCAATTAACAGAATTG
GATGACAAGCAAATTTCTTCTTTGACTTCGCAACAAATGCGAGCTTTCGA
TGCTCCTCAAGCACAAGCCCTGCAAGCTGTTCAGGACGAAGACCCTAAAG
ATGAAGATCCTTATGCAAGCAGTGGAATGCGGATGGAGGTGAACATGATA
ATGTATTTCATCTTGATGTGTTTTGCTCTCTTCATGACATGGATGTAAAC
GTTCATATACAGCGTGTCTTGGTCGCAAAGGTTTGTCCAACATAATCCCC
TTCACTCTGATTCTACGCACtctattttgtgtttttgtagCTCCAGGGAA
GTTTTTGTGgcaatttcttttaaaactttgaagaaTATAGTAGTTTAGtg
ttaaaaatctattttttaagGCTCTTTGAATTAAGTGCACTAGAATATAT
GATTGTAATGcactttattttgatttatttggaTATGAAGGATTTTCTTA
GTTGTGCAGTTTAACACTTTGAATTAGATCTGACTGGCAACTATATGGTG
GTATATATGATGACAACTACATGTGCCATCTTAAGGTTCGTTTTGTCAAA
AGGAGGTACGGATACATCTTTTGGACCTCATTCCAAATTCTACTCAGGGT
CTAAGAGATTACGATAACGAAATCTTATTTAGAGATCTCAATTTTTAATC
CTCGAAAGCCGAAGCTTCTAGTGAAAAAATAAGGGatgaaaattcaacaa
aattcggGATTCCACTTTACAACAATTTCCGTCCCTTTGAGGGATTCTCT
TTTGGCGCAAACCCAGGGTCGGTCTCAAGCCCATTAGatttaagtttttt
aatgatGGTGTTTAGTTTTAGTTTGTTTAAAACCCAGATCTCTTTATTGT
ATGGTTCGTTTTCCATTAAACTGTTCCCTGTTTTAATTAgttgttttata
ttttgtagaatttttttcacaacaTGAAGGGATAGAGTTttttatacacg
ttttcttttataagaacatccaaaaattttgaagccttgaaatgttctta
acattttgagttttaagcctaaaaatgttctta
Run BLAST on NCBI

transcript from alignment at scaffold_58:1154721..1166598-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071039 ID=TCONS_00071039|Name=TCONS_00071039|organism=Clytia hemisphaerica|type=transcript|length=11878bp|location=Sequence derived from alignment at scaffold_58:1154721..1166598- (Clytia hemisphaerica)
AGAGTATATTAATATGAAAAGGGAAATGATTCTTATTTTTTTGGTGACCT CATTGCTGTTAGCTGACTTTTCATTAGGTAAGTGTCAATCAATTAATTTT ATTTGTGAATACTCAAACAATGTTTTCTAAAATTAGTAGTCACTCAACTT TGTTATATGGCCATAATATTTGGAAAAATAGGAGTTCTGCTACAAAATTT TGAAAACTGCAAGTAGTTTTTAAGTGCCTTAACCTAGGGTTGGAAAGTAG AGTTTTAACTCTGAGTTTTAACACAGGACCAAAGACTTAGGAGCTTAGGA TCTGAGGAACCAAAAGCTTGTGAATGGTCTGACTAGGCTGAGAATATAGC CTGGAAGCCACTTTTCTCCTCCTGAATTTAAATATCCGATTAGACAAAGT ATATCCTGAAAATGTCATTCTTGCTTCAAATTTAGATTCTGCAAAACGCT AAAATACCCAGAAATGCCAACATATTCTGATTGTAGATTGGTCATTCTTA GTTTTGCTTGTTTTCAGGTGAAGAGACATGCTGTGAGAAAAATAACTTCA GAGAACGATGTCATTTCTTGTGTGACAAGTCAGAATCAACATTTTGGGAT CAATTGGCTTGTGCGAAAGAACGAATTAAAGTCATCTCCTGTAAAACAAA AGAAAGTGAGATAAATGTTATTTGAACTACATGCATTTTGTTTCGATCTT CAAATCTAATATATACATCTGAAAGAATCTTCTACATCTAAGCCCAAAGT AATACTGTTCCATCACGGTTCATAAATATGTTGGTGAAATTTTGTTTTAC ATTTTAGAGTATGATTTGGCAAAACTTTATGGTGATAAATTTACAGATAC GTAAGTTGACACACTTCACAGTTCCTTTTAGTCCTTTAAAAACTTAAAAG TTTATGAGGAACAAAAGTTTCTATTTTTATTAAAGAGTTTTGAACAATTT TTGTTGTTTTTATGATTTTATAATCACCCTTTTTAAGTTGTTTTGTTATT TTTGATGATATTTATGATAAATTATATCAATTCGCACTAGTGTTTCTCAA GGATGGGAGAAGCTGGCAACTAACGTTAAAGACAAACTGGCAGACGCAAA AGAGTTCTCAACCTTGTCTGTGAATGAATTGAAGTCTCTACATCAGGACT TACTCAGTAGCCTGGTAAGTACTAGTTTTTAATCTCTTTTGTCTCTTCTA TCCCTTAATTTACTTGGACAATATAGTCATTTCAAAAGGGTTTCCATTTG GCTAGGTTTTGTAAATTCTAAACTTCTTCATTCAGTTTTTTTTTTAGTTT GAGTTGAGCTAATTTCATAGTTGGTGATCTTCAGTGAAATTCTGTTTTTT TATATTTTCATCTTATCCAAAAATTCTGCTCCCTTTGAGAGTTTTTTTAT TTGTCAATGAATTCATTCCTGATATTTTGTTTTAACTTTTCTCAATTGAG CGCTCTCTATTTTATTACATTAATTGTTTAGAGTACAATTAAAGGCTTAA CATCATCACAACTAGGAGGTATCATGAGTAAATTTACGCAATACACAAAA GAAAATCTACATCAACTTGTACAGAAAATTGATATTGATGTTTTATACTC CAAGATCAAAACAATGGCTGTAAGTACTACCAGACTTCAACAATGGCATG CCTCTGAAAATTTTAAAATATTATTGACTTTTTAGCCTTGTCCGCCATTA GTAAACCTCAATCGCAAATGAGAGATTGGGTGCATGTTGTATGATATGTA GAGCTCCTATATCCCTGTTCTGAGCATACAGATAACTATTTATACAATAT TTAAGAGCTACACATGGGATAAATCACAACTTGGAGTGATAGCTGAGACT GCTTTCAAGAAATATGGCGCAAATGTTGAACAATGGTCAAGTGATAATTT GAGGAATCTGGGACGCTTTTTGTCAGGGTTGCCAACAAAAGTGTTTTCAA AGTTTTCTGATGAAGCTTTCAAGGAAAGGTAAGAGACATTTTCTGATTTT TATTTGTAATGCTTTAGAATAAAAGTCCTCTTCTAACTGAACTTTGCTTT CTGATCATTATAACTTTCTTTTGGTACTGCTGGTAAAAAAAGGCATTTTT CTTATATCATCTAAGCATAACTAGTTGGTACATCTGCTTGTTTAAAGGGA CCTTTCCTTTTTGTAGTCTTTCTTACATTATCCGACATTCTACTTCCCTT TCAGCTTGCAAGATTTCTGTGATGCTTCTCTCCCTACAGAGAAGAAATCA AAACTGATTGCAACAGCAGACAGGGTCTTTGGAGATAAAAACACTTGGAA TAGCACAACTATTGGCAAACTTTGCAACATTATCGAAGCTCTCACACCTC AAGAATTCCTTATTTTGAAAGCTAAAGAGGTAATTTGTTTCATTTGAACA TTTCGTGAATTCATTTATAAGGTTTAATAGCTAATTTATTTTTGAATAAG TCACTGGATACCAGCGTGCTGCAACAACAGTCAGAAGATGCGAATAACAA GAAGCAAATACAACAGGAACGAATATTAACAGTAAAAAGTAAAAATTGAG TTGATCTTTTTCCAGGTTGAAGAATCCCTGAATTCATTGTCGCAGAGGTT TCTCACACAAGAACAAAAGGAGGTTGTACTGAAAAAGCTGAAAGAAAATT GGGGAAAATTCTCTGCCTGGTCAAAAGTCAATTTATCGAAAGCCAAGGAC TTTTTAGAAGGACTTGATGTTGAAGATTTTAAAGAGCTTGACAAAGACAA AATAAAGGTAAAACTCATTATATACAGATAGGGCTGACCCTCCAATTCAT CTTTGCATGATTTTTTAGAGAGTCGTACAATCTAATGTTTTTTGACATTA GGAGATTTTGGATTCCGGCAGAATAAAGTTCATGAACAAGGTGCAGCAAA GTGCTTTGTATGAGGAAATCATCAAACAACATGGTCCACCTGAAGATTGG CCCGAATCCATCCTTTCAAACGGGTTGGAGTTGATCCAGTCAGTGAGTGT AGAGGACTTGCAGAAAATCAAAGCTAAAGCCAAAGCCTCATTGATCACAG CTCTGGAGAAAGGGCAGGAAATGGACTGGAGTCGTGATCAAGCAGAATTT CTTTTGGAGTTGGTTGAAGATGAAGAAGCAGTAAGCTTATTTTGTTTTTC TTGGTAAAATAACACTAGCCTGTGTCGTCTGTCTTTGTCTTAATGGCGAT GTGGAGACCTTAAAGTTGGTTAGTTAAGGGTTGAAATTTCACACATTTGG GTTTGACACTTCTTAATGGATTATTATCTGCGGGCATTTAAATTTTTCAT AACTGGGGACAGCTTATGGGGGCAAATATTGAAACTCACTTTAAGGACAA TATCGGGTATTCAACTTTTTCAACGTCAATTTTGCGGGCATAAATGAGAG CTTTGCGGGCATAAATATAATATATCAATATTGGTTTATCCTCCCGAATT TAGCTTGCAACATTCACCAAAGAAAAAGTTGTGCAATTCGGATCCTTACT GAAAGCCTTCTCACAATCCGATGCAGGGAGGATCTCCAAAAAAGTGTTGT ATGCTGCCTTCCCAGAGCTGTTTGTGGTCAAAGGAATCGGTGAACCTGTA TTACGTTATTTCATCAAAGTGGTAAGATCATTGCTATTTGATTTGTATTT AGATTGCTAAGATAATTTGATTGCTCATGCAATCTTTTGTAACTTTAAAA GCTAATACTTATCAAACTTGGCCATCTTTAAATCAATGATATTGTATTTT CAGTACAAGGAGGAATCATCTAAAGGCGAGATCAAGAATCTTGGTCAATT TGCCAAAGCCTTGACACGATATGAGATCGAACAACAAGACATTGAAGATA TTCTTGAGAATTTGCAGAAATTGAGTGGGACCGACTTTGATGAAACTCAG GTAATGTTGGATTAACATCATAGTAGTGTGTTAACCTATATTGTAAGCAT AAGTTTTTTGTGTATAACTCGATCATTGTAATATAGCTTTAAAGTGAAAA CCTATGCTATATAAATTTATTTTTAGGCTGCAGAGTTATTGATCAAAATT CGTAAAGAATTGGGAAGCATGGAGCAATCTGACCACACAGATGCTGATAT TTTGCCATGGGGTTTCCAGAACATTCGGAAGATTGGTCAAGTGATTGTTG CATTGACGCGAAAAGAAGCATTGAAATTCCCTTTCAAAGGAATGGAAAAT ACTTATGAAGAACTGGGGAAACATGACGGTTGGAAAAGGAGAGTTGTAAG TGTAGATAGATCCTTGGCATTGAGGTTTTCATTTCTTGTCAGTTAAACAT AGAGAACCTTTTTATGCTGATCTTACCTTAGCAACTTGAGGAAAAGTAAT AAGTTTGCATTTTGTGTCCAGGTCTGACTAAGACCATGTTCAGACGTTAC GGTCTCGTATCGTTCCGGTATGGTTTCCGTTACGGATCGAGAGTGTTCAT AATGGTTTCGGAACGTTTCGGAGCAAGAAAACGGAGCAGTTCCGTTCCGA TGAAAATAGTGGAGCGAAACCTTTTCAATCTGTTTTGCCTTGTAAAACGT TTTCTTTTTTGACGTTTCGAATTTTGACGTTCACACTTGTTTCGGAACCG TTTTGTTTCGGAACGATACGGAATCATCGTAAGGTCTGAACATAGTCTAA GTTACTGGGAGTTCATATTTAATAAGGAATTTTTTGATCATTTTTTTCTG TAGTTAAATGATTGTTAATTTAAAATTCATTTCAAGGTATTGGCTTTTGT GAAAAGAATGAAGGAGAACTGGGCCCAACAAAACATTACATTGAACGATC TCAAAGAAGTCGATATTGAAGTCTTGGGAAAGTTTGTTCAAGGTTTGACT ATGGATGATTTGAATGAACTATCAGTGGATGTTCAACTGGTGGCTTTCAA ACAACTTGGAAAATATACTGGTCTTCCTGAAGATAAATTGAAGTCAAGAG CTAATCTCGCTTATAAATACTTTGAGGTAACTCATTCTGAAATTCACAAG TTTTGTTTTAATGCTAGTTGTGTTGATTGATCTTATTGTGGTCTAAGAGA AACAAAAGTCGTTTCATTCTTATTGATAATTAATATCAAGGATATGGAAA AGTTTACACTCGGGTTTCGTTTGAACGACAACTCAAAACATGCTTCTTTA CAGAGACGGAAAAACCTTTTTTGTCTTTTATTTTCTCCAGAAACAAAGAA GTGGATCACTAACAAGCAATGATTTGCAAATGATGGGTAACTTGTTACCA GGCCTCTCCCCAGACCTCCTCAGCACAATTGATGAACAAAATGTTGTGGA GCACCTCCATAAGTTTACTCAAAGTACTTCAAAAGAAAAGCAAGAAGTCT TGTTGAGAAAACTGAAATCTCATTTCGGTCAAAGGTAATACCAGATAATT TTTTTTTCTCAACAAATCTCGAAACATCCTTAAACTCCGAGGAGCTATGA TTGCAGTCGGTTCAAAGGTACTTTAAGAAATCTTAATTCCGTATGACCCT ACCTTTGGTCTGAAATAAGATTCTCGTCTATATCGGATTCCGGTCAGAGA TTTGATTCACTTCCTCTCTTTATTTGTATTTTGTGATATCACCCCACATT TTAAACTCACATCTGTTTAACCTGTTTTTTAGTGACGTTGCTAAATGGAC AGCCTCACAATGGAACAAAGCATTACCATTGGTCGAGAAGATGTCATCCA CTCTTGAACTTCGTTTAATGAATAATGATGTCTTTCAAGAAATGCTGAAT GAACTTGGTCGAATCAAATCGTGGAGCAAAGATCAAAGTGATGTATTGTT GAACAAAGCGAAAAACGTCTTCGGAAAAGGTACTTTTTTTCTCAACCAAT ATTTTAAATATTTATAAATTATTAGTTATCGGTACATCAAAATCGGATCT TGTTCGATTTAGCCAGGAGGACCAAATAACTTCAATTATCTGTATGTAGT TATTGCATTGATACTACTCATTCAAACATTTGACGTCACTCCATATTCGT ACCATCCTTCTGACAGCCTCAGGGCCATAGGGTCCACACTTCCCCAGAAA TTTGGGGGTACCTAAAAAAAGTGTTAAAAAAGCCAGGTACCTTGAAGTAT TCTTAAATTTAGGGGGTACCTGATATGTTTGGGGATGCATATTCATTAGT GGGGGGCTGTTATTTTTGAATTTGAATCGAATCTCTCATTCAGAAGACTT TATAACTTTGTCTGTCTTTCCCTTTTCACCCAGTTTGCTTACTGTACTTT AAATCACATTGATAGAGAACAAGTCAGTCTCGCAAGGAGAAGGACATAGG TTTTCGCTGATCAAGGGGGTAACTCAAAGTTGGGGGTTACTTTAGAATTC TAAAAATTTTTGGGGAAACAAAATGATTGCGGGTACCTATATTTTTTGGG GGGGTACCTGAAGCCGGGAGGGCCCTATGCAGGGTTAATAAGGGTATATT TAGATTAAGTTTCTTTGATTGTTTGAGTTATTCTATTTTCTTGTATTTAG ACATTAGTTCATGGGATTCCAAGATTGTTCACAAAATTGGTTCTATCTTC ACCAGTTTGGCTTCAGAAGACATTCCCAAGATGAGCAAACAGTTCTTCGA AAATCTCAATGTTGATGTGTTGGATGGAAAGAACTTTTCTGCTTCTTTGA AAAAACTCATGTCCAAACAATTTCTCAAGGTTGGATTTTTTGAGATACAT ATTTCTTTGATCATTGGAAATTCTTGTGAATATGACACTGTTCGTATGCT GTAAAGTAAACCCTGAATGGCTAGATAGAGTGCTTTAGCTGAAAAGTGTG CTTTGGTAGGGTGGGAAATCCCATCTAGGTCACGTGACATTACAATAAAA TTTCATCGCTTGACCAATCAGAATCTTCGCGATTTTCGAAAACATAGCAA CAATATTTGCGATAATCATTTTTTTTTTGCTTGGAAAAGCACGTCATCTG GCCCTTGGGGCTTTAGAGAAGTATGTAGATTCAACATCTTGTCGGCAAAA TTGGGGTCCGTCTTCTCATACTGCGACAATATTATTATGATTTCATTTCA CTATAGGAATTCACAGACGATGACGTCACTAAACTAACATCGAAAATGAT GCAACGATTTCATTTCTTGATTTCTGGATTGGATGTTGAAGATTTGAAGA AGTTATCGTTGACCAGTGATGATGTGTTGGAGACTTTGAGTAGTGTCTCT GATTGGTCTGAAGATCAGGTATCAAATGGTTTTATTGATATTTTTTCACT GACCATATACTCTGGTCCAAGCTATATCCTTGATTGGAGTTTTTTGAAAA TTGATACCCTAATGGTAGGACTTACTTGATGTGGGTCTATTTACAAATTT TCTCGTTTAGAATTTTTTCTTGCAAAGTGCTACGATTAGGATATAAAAAC TCCGATAGAAGATCGAGAAACTTTTTCCAGGGTTTATAAAAATCGATGTA TTTATTGTTATAAATGCTTTGATTTTAAACCTTATTAAACCCTGGACTAC AACTGCAATCTTTGATCGGAGCTTTTGAAAGTGGTACCCGCAAAGAAGTC ATTGTAGTGTTAAAGTGTTGAGTGTTGAGTAGTGCTATCATTAAGGTACC ACTTTCAAAAAAACTCCAATCGAAGATTTTGGTTTGGCGAGATTGAGAAA CTGGCTCATGGTTTACGTAAAACTCAATGGAAGTAACTTCACCAAACGAT TGGTTTGAAAATGATAAAAAAAATAATCAAAAAACAAATCCTCACTGAAA GATGTGCTAACTTTCCATCCTCACTGAATTTTCTGACTTGAAAACTATGG AATATATAAATTACAAGCCATAAAAAACATAGGAATATCAATCGAGTTTC AGGCAGTGATTTTTACCCTAACTTACCTACCGGGTCTGTGAGAAGGGGGT GTTCATTCACGATGACTCTTCTACTGTTCATAGAATTAATGTCTACTGAT GTCTACTAAATTAGTTTTTTCCAAAAAAATGTTATATCCTCCACCCCTGA TTTATGAACATTTTCTTGACAAAATAAACAGATGCAATGATATAAAAATA GTTGAATTCGAGGCTTTAAATGATACACCTTCTTGAGCGTTTTGTATCGA AATTCCTCATTCTACAAGCGTTAGATACCATTTTTGGACCTACCCCGGTG GGGTGGAGGTCCTATAAATTAACCTTTGTCCGTTCGTCTGTTCGTCCGTT CGTTCGTTATTAGCTTTCCTCGTGATNNTTCCTCGTGATTGGCTCATTAG TTTTTTCTGATTTTTTGCACAAAGATGTGTAACTATAAACCCTCAAATGT GACGGAGCCCGATTTTCGAGAAAAAAAAATTGATTTTTTGCATGAAAGTA GGGTACCATCATAGGTAAAAGATGGCTCAAGCAGATTTTTTCAAAAAAAT TTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAATAA GCATACATCAATGTTCTTAGTTAAAATTACTCAATTTTTTTATGAGATAG ATTTTTTTTTGCTCATGTGGCTTACTTTTGAAGAATGTGTGTGTTTAGAC ATTAAATTTTGGTTTCTTGGCGTGTTTTTATAGAAAAACTGGCCAAATTC GATATTTATTTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTC GAGATTGGTTCTTTCATTCTTTATGATTTTTTGCACAAAGATGCATAACC ATAAACCCTCGAATGTCACGGAGCCTGACTTTCGAGAAAAGTGAATTTTG ACTTCAAAAGCTTATAACTTGACAACTACTTGACCAAACTTAAAAAGTNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNGCATGTCCTCTTTCTAATAAAAGTGG TTTTGAGTCTAAACAAGACTTTGTTCGGCCTCAGTGGCTCGCCAAACGTC CAAAGTTTTTTCTGAGGCACCCGGTATAAGAATCACTATTAATAAGCATA CATCAATGTTCTTAGCCAAATTAATCAATTTTTTGATGAGATAGATGTTT TATTTGCTCACAAAATCTTGAATATGAAAGAATATTTCAAGAGCATGAAA TTTTGGTTAAACGTTTTTTTTATAAGAAACAAACGACTAATTTTAATAGA TCGTCCTGGATCGTCACTATTTGTGTTCTGAATGATTGTTTAATGGTCAT GCTCACGTAGATATCAATTATATATGTGTTAAATGCATAAACCAGGTAGG TCCATAAAAGTATCACTTGTTCTTACTTTCAGTTGGAAGTGCTTGGAGAG AAAGCGAAACCGTACATCAACAGTTTCTTTAACGTTGAAGAAAGAGCTGT CTTTTTCAACCAGTTGGTGAAAGGGCTTCCCTTGGATGACATCAAGAAAA TGACTACTGCTGTCTTCAAGTATGTACTTCAATGCTCAAACTTCACGTTT TATATAACTTAGGCTTTGTTGATACTTTATTACGTGTATCCCAGGCTTTA TTTACGTTACTGATTGACGCCAGATTATACCTTAGTATAGGCTGATGCGA GTTAGAGGGGGGACTTCTCAAAACAATAAAATGAAATAGTCTGACGTTAC AAAGATTAACGGCAATCCGATGGTTTCAAATCCAGGAACAAAGTGAAATC TGAAGTTAACATTAAACATCAAAAAACTGATAAAACGCAGAGAAGGACGT TGATTTTATTATTTAGTCATTTTTAAGGGCTTTTACGAGCATTTAGATCA TGATATTTTAGCAGTTAATGGTCTAGCACTGTATGTAGGAAAAAATTACA CTTGTGTTTCTGCTTTCAATGTATTGAACTTTCTGCTTTCTCCCATCTAG TCAAGCCATCAGCAAAGTGGGATCGATGAACGGCCTCAACAAAGATCAAA AGCAAGCTTTGATGGGAAAAGCCAAAACTGTTTGGGGAGGTGTTGAGAAA TGGAGTGCTTCTCAAATCAGTGAAGCTAAAGAAATTATTGGTGCGTGTTT AGTTTGAATTTCTCTCGTTTTCTTTTTTTCTCAATTGTTATTTTTTAATA TTCCACTTATAAATATCATTTTAACAAAAAATCAAATCCAAAACCACAAT CGTATCCCGATCCGACCAAAATGCAGCCTTTTTCACCACTTGAAGATTAG TCTCCCCTCTTAGTACCCCAACTCTCAAATAAGCTTTCTTCATTTTTAGA TGGTTTGGAGCCGAATGATGTGAAAAAGATCACACCAGAATACATGAGTT TTGTTAGCTCTGATGCCATCACCAACTTCTCTGACGAACAACTTCAGGTA CACGAATAAAAAAACGCAACAGCATTGTTGTTCATTTGATTCGAATTTTT TTCATTAACCCATCCCTTTTACCTCCTTCCTCTCTCCCTCAGTAGGTCAT ATTCACTATCTTTTTCCTTACTGATTATTTGCATGAAGTTAACAACACTG ACCTTATACCCTCTCTTCATCCTAATTTACAGGCTTTGACAGTTGACCAA TTAACAGAATTGGATGACAAGCAAATTTCTTCTTTGACTTCGCAACAAAT GCGAGCTTTCGATGCTCCTCAAGCACAAGCCCTGCAAGCTGTTCAGGACG AAGACCCTAAAGATGAAGATCCTTATGCAAGCAGTAAGCACATCTTTTTG ACATGTTATATTCTCAGAGCATACCCTGATCCAATAGTACTTAATATTTA GAAGAGGAGAAGTGGATTCATTTCCCAGGTAGATATAAAGTAGTCACACC CCTACTTTAATCTAGCGCGAATAATGATATGGAAAGCCACTGGTTTTGGC AGCCCTTTTTGGTAAATGTTTTCTTGAAAATTGCTACCATTTTTGTTTTT AATTTGTATCTTTCAGGTGGAATGCGGATGGAGGTGAACATGATAATGTA TTTCATCTTGATGTGTTTTGCTCTCTTCATGACATGGATGTAAACGTTCA TATACAGCGTGTCTTGGTCGCAAAGGTTTGTCCAACATAATCCCCTTCAC TCTGATTCTACGCACTCTATTTTGTGTTTTTGTAGCTCCAGGGAAGTTTT TGTGGCAATTTCTTTTAAAACTTTGAAGAATATAGTAGTTTAGTGTTAAA AATCTATTTTTTAAGGCTCTTTGAATTAAGTGCACTAGAATATATGATTG TAATGCACTTTATTTTGATTTATTTGGATATGAAGGATTTTCTTAGTTGT GCAGTTTAACACTTTGAATTAGATCTGACTGGCAACTATATGGTGGTATA TATGATGACAACTACATGTGCCATCTTAAGGTTCGTTTTGTCAAAAGGAG GTACGGATACATCTTTTGGACCTCATTCCAAATTCTACTCAGGGTCTAAG AGATTACGATAACGAAATCTTATTTAGAGATCTCAATTTTTAATCCTCGA AAGCCGAAGCTTCTAGTGAAAAAATAAGGGATGAAAATTCAACAAAATTC GGGATTCCACTTTACAACAATTTCCGTCCCTTTGAGGGATTCTCTTTTGG CGCAAACCCAGGGTCGGTCTCAAGCCCATTAGATTTAAGTTTTTTAATGA TGGTGTTTAGTTTTAGTTTGTTTAAAACCCAGATCTCTTTATTGTATGGT TCGTTTTCCATTAAACTGTTCCCTGTTTTAATTAGTTGTTTTATATTTTG TAGAATTTTTTTCACAACATGAAGGGATAGAGTTTTTTATACACGTTTTC TTTTATAAGAACATCCAAAAATTTTGAAGCCTTGAAATGTTCTTAACATT TTGAGTTTTAAGCCTAAAAATGTTCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044136XLOC_044136Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071039-exon-scaffold_58-1575043694:1166522..1166598TCONS_00071039-exon-scaffold_58-1575043694:1166522..1166598Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1165944..1166081TCONS_00071039-exon-scaffold_58-1575043694:1165944..1166081Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1165749..1165791TCONS_00071039-exon-scaffold_58-1575043694:1165749..1165791Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1165435..1165558TCONS_00071039-exon-scaffold_58-1575043694:1165435..1165558Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1164980..1165117TCONS_00071039-exon-scaffold_58-1575043694:1164980..1165117Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1164621..1164793TCONS_00071039-exon-scaffold_58-1575043694:1164621..1164793Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1164220..1164394TCONS_00071039-exon-scaffold_58-1575043694:1164220..1164394Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1163842..1164033TCONS_00071039-exon-scaffold_58-1575043694:1163842..1164033Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1163469..1163747TCONS_00071039-exon-scaffold_58-1575043694:1163469..1163747Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1162978..1163145TCONS_00071039-exon-scaffold_58-1575043694:1162978..1163145Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1162699..1162845TCONS_00071039-exon-scaffold_58-1575043694:1162699..1162845Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1162354..1162572TCONS_00071039-exon-scaffold_58-1575043694:1162354..1162572Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1161623..1161862TCONS_00071039-exon-scaffold_58-1575043694:1161623..1161862Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1161215..1161408TCONS_00071039-exon-scaffold_58-1575043694:1161215..1161408Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1160770..1160966TCONS_00071039-exon-scaffold_58-1575043694:1160770..1160966Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1159920..1160098TCONS_00071039-exon-scaffold_58-1575043694:1159920..1160098Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1159381..1159542TCONS_00071039-exon-scaffold_58-1575043694:1159381..1159542Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1157080..1157216TCONS_00071039-exon-scaffold_58-1575043694:1157080..1157216Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1156509..1156648TCONS_00071039-exon-scaffold_58-1575043694:1156509..1156648Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1156202..1156299TCONS_00071039-exon-scaffold_58-1575043694:1156202..1156299Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1155866..1156016TCONS_00071039-exon-scaffold_58-1575043694:1155866..1156016Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1575043694:1154721..1155632TCONS_00071039-exon-scaffold_58-1575043694:1154721..1155632Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1166522..1166598TCONS_00071039-exon-scaffold_58-1510915933:1166522..1166598Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1165944..1166081TCONS_00071039-exon-scaffold_58-1510915933:1165944..1166081Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1165749..1165791TCONS_00071039-exon-scaffold_58-1510915933:1165749..1165791Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1165435..1165558TCONS_00071039-exon-scaffold_58-1510915933:1165435..1165558Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1164980..1165117TCONS_00071039-exon-scaffold_58-1510915933:1164980..1165117Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1164621..1164793TCONS_00071039-exon-scaffold_58-1510915933:1164621..1164793Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1164220..1164394TCONS_00071039-exon-scaffold_58-1510915933:1164220..1164394Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1163842..1164033TCONS_00071039-exon-scaffold_58-1510915933:1163842..1164033Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1163469..1163747TCONS_00071039-exon-scaffold_58-1510915933:1163469..1163747Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1162978..1163145TCONS_00071039-exon-scaffold_58-1510915933:1162978..1163145Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1162699..1162845TCONS_00071039-exon-scaffold_58-1510915933:1162699..1162845Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1162354..1162572TCONS_00071039-exon-scaffold_58-1510915933:1162354..1162572Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1161623..1161862TCONS_00071039-exon-scaffold_58-1510915933:1161623..1161862Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1161215..1161408TCONS_00071039-exon-scaffold_58-1510915933:1161215..1161408Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1160770..1160966TCONS_00071039-exon-scaffold_58-1510915933:1160770..1160966Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1159920..1160098TCONS_00071039-exon-scaffold_58-1510915933:1159920..1160098Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1159381..1159542TCONS_00071039-exon-scaffold_58-1510915933:1159381..1159542Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1157080..1157216TCONS_00071039-exon-scaffold_58-1510915933:1157080..1157216Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1156509..1156648TCONS_00071039-exon-scaffold_58-1510915933:1156509..1156648Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1156202..1156299TCONS_00071039-exon-scaffold_58-1510915933:1156202..1156299Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1155866..1156016TCONS_00071039-exon-scaffold_58-1510915933:1155866..1156016Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1510915933:1154721..1155632TCONS_00071039-exon-scaffold_58-1510915933:1154721..1155632Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1166522..1166598TCONS_00071039-exon-scaffold_58-1491911889:1166522..1166598Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1165944..1166081TCONS_00071039-exon-scaffold_58-1491911889:1165944..1166081Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1165749..1165791TCONS_00071039-exon-scaffold_58-1491911889:1165749..1165791Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1165435..1165558TCONS_00071039-exon-scaffold_58-1491911889:1165435..1165558Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1164980..1165117TCONS_00071039-exon-scaffold_58-1491911889:1164980..1165117Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1164621..1164793TCONS_00071039-exon-scaffold_58-1491911889:1164621..1164793Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1164220..1164394TCONS_00071039-exon-scaffold_58-1491911889:1164220..1164394Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1163842..1164033TCONS_00071039-exon-scaffold_58-1491911889:1163842..1164033Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1163469..1163747TCONS_00071039-exon-scaffold_58-1491911889:1163469..1163747Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1162978..1163145TCONS_00071039-exon-scaffold_58-1491911889:1162978..1163145Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1162699..1162845TCONS_00071039-exon-scaffold_58-1491911889:1162699..1162845Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1162354..1162572TCONS_00071039-exon-scaffold_58-1491911889:1162354..1162572Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1161623..1161862TCONS_00071039-exon-scaffold_58-1491911889:1161623..1161862Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1161215..1161408TCONS_00071039-exon-scaffold_58-1491911889:1161215..1161408Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1160770..1160966TCONS_00071039-exon-scaffold_58-1491911889:1160770..1160966Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1159920..1160098TCONS_00071039-exon-scaffold_58-1491911889:1159920..1160098Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1159381..1159542TCONS_00071039-exon-scaffold_58-1491911889:1159381..1159542Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1157080..1157216TCONS_00071039-exon-scaffold_58-1491911889:1157080..1157216Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1156509..1156648TCONS_00071039-exon-scaffold_58-1491911889:1156509..1156648Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1156202..1156299TCONS_00071039-exon-scaffold_58-1491911889:1156202..1156299Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1155866..1156016TCONS_00071039-exon-scaffold_58-1491911889:1155866..1156016Clytia hemisphaericaexon
TCONS_00071039-exon-scaffold_58-1491911889:1154721..1155632TCONS_00071039-exon-scaffold_58-1491911889:1154721..1155632Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1154721..1166598 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.22011 4.69729 2.02249 1.87135 0.415231 0.635899 0.951012 1.22966 1.46959 1.34509 8.5834 1.26779 24.7352 19.1211 12.3648 12.6604 10.0254 12.8238 25.5958 47.8922 19.0106 20.1829 11.369 14.9482 15.6931 21.1311 24.7089 19.0902 21.3142 21.8568
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071039 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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