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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070500 ID=TCONS_00070500|Name=TCONS_00070500|organism=Clytia hemisphaerica|type=transcript|length=413bp
GTCGAACTTTCCGAACGAACTTTTATTTGACCCTTCTCGAACTTTCTCga
ataaagttaaaaagttCTTCTacgattttaaagaaaaattcagtTTCAGT
AGTTATTGGAAAGTAATTGCATAATGACATCTGAAAGAAGGTAGCACACT
ACACACTACTTGAAATTCTCATTCCAACAATACGGATCTATATTACGTTG
TGCAATATGTTTGGCTGGTTATTGGTGATTATTTTCTTCTTATCCACAGC
TCACGCAGAAGaCTTGGTGTGCCAGTACAAACCGGGCAACGGGATCGGTA
AACGGGAATATCGGGTGGGGAAGATTCATTCACCGCTGGAATGCTCGACA
CGTTGTATTGAGATGAAGAAAAGGAGATCGGATATCAATGGCGTTATCCA
TTCTGCTAGGTTG Run BLAST on NCBI transcript from alignment at scaffold_56:136768..137943- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070500 ID=TCONS_00070500|Name=TCONS_00070500|organism=Clytia hemisphaerica|type=transcript|length=1176bp|location=Sequence derived from alignment at scaffold_56:136768..137943- (Clytia hemisphaerica)
GTCGAACTTTCCGAACGAACTTTTATTTGACCCTTCTCGAACTTTCTCGA
ATAAAGTTAAAAAGTTCTTCTACGATTTTAAAGAAAAATTCAGTTTCAGT
AGTTATTGGAAAGTAATTGCATAATGACATCTGAAAGAAGGTAGCACACT
ACACACTACTTGAAATTCTCATTCCAACAATACGGATCTATATTACGTTG
TGCAATATGTTTGGCTGGTTATTGGTGATTATTTTCTTCTTATCCACAGC
TCACGCAGAAGGTAACTACCCCAGCTGGCACACAGCGTTGTTTCGACGTT
TTTCTAACGTTCACAACGTTCATATAACGTTAGAACAACATTGAAACAAC
GTTGTGTGCCAGCTGGGACAGCAAGTTCCATTCTCTTGAGTCAAACACTG
TCTCAGTGACTCGCGGGGGGGGGGGATCGATCTGGAAACTACCGCATACA
CAGATAAACGTTAGGGTTTCATAATTGGAGCCTTACAGTCCAGGGGAAGA
AAATTCAGGCAAATTTTTGAGTAAATTTGGGTGAAAAATTGACCCTACTA
GTGAATTACAGTTTACTTTTTCTATGGGAAATTTCATAGTATACATTTTT
TATAAGAGTAACCTTTGCAAGATCATAAGTTTTCGTTGGCCTAAATATTA
AGAGCAAGTTGGTTTTATGGGCTCTAAAACACCCAATTTCTGAGGAAATA
GTTTAGCTAACGGTTTCACCTAAATCGAAAACGAAGGCTCTAACTCCTTT
GAAAAAGTAGGAGGATCTATCATATCTTATTTCCTTGATTCCTATCAACT
CTTTCAATACTGCCAAGCTAAATTTCCTTCATTTATAAACGATTTTTGGC
TCACGGTAATCCCAATTGAGGATCTAAAGCAAAAAAGTGAGAAGAGCTTC
CCAACGAACTCAAAGATGACCTATTTTGCTTTAGCATTTGAAGATGATGC
ACTGTTGCTTTGAAAAAGTCCCTAAATTTCAGTTTCCCGTATTACTGAAG
AAGGACCTTTTTTTTTCTCTCTAGACTTGGTGTGCCAGTACAAACCGGGC
AACGGGATCGGTAAACGGGAATATCGGGTGGGGAAGATTCATTCACCGCT
GGAATGCTCGACACGTTGTATTGAGATGAAGAAAAGGAGATCGGATATCA
ATGGCGTTATCCATTCTGCTAGGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070500-exon-scaffold_56-1575043694:137683..137943 | TCONS_00070500-exon-scaffold_56-1575043694:137683..137943 | Clytia hemisphaerica | exon |
| TCONS_00070500-exon-scaffold_56-1575043694:136768..136919 | TCONS_00070500-exon-scaffold_56-1575043694:136768..136919 | Clytia hemisphaerica | exon |
| TCONS_00070500-exon-scaffold_56-1510915933:137683..137943 | TCONS_00070500-exon-scaffold_56-1510915933:137683..137943 | Clytia hemisphaerica | exon |
| TCONS_00070500-exon-scaffold_56-1510915933:136768..136919 | TCONS_00070500-exon-scaffold_56-1510915933:136768..136919 | Clytia hemisphaerica | exon |
| TCONS_00070500-exon-scaffold_56-1491911889:137683..137943 | TCONS_00070500-exon-scaffold_56-1491911889:137683..137943 | Clytia hemisphaerica | exon |
| TCONS_00070500-exon-scaffold_56-1491911889:136768..136919 | TCONS_00070500-exon-scaffold_56-1491911889:136768..136919 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_56 | supercontig | scaffold_56:136768..137943 - |
Blast
The following BLAST results are available for this feature:
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