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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070377 ID=TCONS_00070377|Name=TCONS_00070377|organism=Clytia hemisphaerica|type=transcript|length=874bp
TTTTGATCTTGTGAgtctctttttgtttacatACTGTCAATAGACGTCAC
GAAAACTTAATTGGGACATATGACACCTAAAATTCCCACGGTCTGACCTA
GAACAAAAAGAAAAGGTCTAGAAAGACAGATctgttttgaatgaaaatat
gaCAATAAGGTCTCAAGTAGCTATCTGAAGTCTAACCTAAGAGAGGGGAA
TTCCCATTCTCTAACGTTTTCTGACAGCCGCGAGTCTNAGTAGCTATCTG
AAGTCTAACCTAAGAAAGGGGATTTCCCATTCTCTAACTTTTCTGACAGC
CGCGAGTCTATGTTTGTTTTGATAGTACGTGTTTGACAGCTACTTCATGT
AAGATTGAAGGTCCGTCTATCTAGCTGGACTGAAGTATATCAGTACCTGA
TTAAAGAGTCTATCCAAGAGTCTCAGGAGTATGGCTGTGATTTGTTGGAC
GAGATGACAGAACTACACCGCACAACTCATGGATCTTGATTTATATGATT
TTCAGTGAACCTCGAGTATCCAAAAGGCCTTATTTAGGGTGGCATTATCA
CTAGTATCCACTAGCTTAGGTACTTCCTTGCCAAGGAGCAACCATTTTCT
ATTTAATAGGTATTTGCTCAATTTTTGttaaatatctttatttttttagt
gATGAAAATTGttaattaaaattataaaaagaaacatgGATTTCTTGGTA
AACATGAGCTTTGCACTCGATGCTGGACATTTGaattgtaTGCATGTTGT
TTCAATCATGATTTTAATTGCACTGTCAATGTTACGATCGATGGACTTTG
TCTTGACTATGATTTGCTTTCAAGATATTATatggattttgattttcaaa
tccTAGTCAAGTTGAAGTTCTAAG Run BLAST on NCBI transcript from alignment at scaffold_55:336947..338123+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070377 ID=TCONS_00070377|Name=TCONS_00070377|organism=Clytia hemisphaerica|type=transcript|length=1177bp|location=Sequence derived from alignment at scaffold_55:336947..338123+ (Clytia hemisphaerica)
TTTTGATCTTGTGAgtctctttttgtttacatACTGTCAATAGACGTCAC
GAAAACTTAATTGGGACATATGACACCTAAAATTCCCACGGTCTGACCTA
GAACAAAAAGAAAAGGTCTAGAAAGACAGATctgttttgaatgaaaatat
gaCAATAAGGTCTCAAGTAGCTATCTGAAGTCTAACCTAAGAGAGGGGAA
TTCCCATTCTCTAACGTTTTCTGACAGCCGCGAGTCTNAGTAGCTATCTG
AAGTCTAACCTAAGAAAGGGGATTTCCCATTCTCTAACTTTTCTGACAGC
CGCGAGTCTATGTTTGTTTTGATAGTACGTGTTTGACAGCTACTTCATGT
AAGATTGAAGGTCCGTCTATCTAGCTGGACTGAAGTATATCAGTACCTGA
TTAAAGAGTCTATCCAAGAGTCTCAGGAGTATGGCTGTGATTTGTTGGAC
GAGATGACAGAACTACACCGCACAACTCATGGATCTTGATTTATATGATT
TTCAGTGAACCTCGAGTATCCAAAAGGCCTTATTTAGGGTGGCATTATCA
CTAGTATCCACTAGCTTAGGTACTTCCTTGCCAAGGAGCAACCATTTTCT
ATTTAATAGGTATTTGCTCAATTTTTGttaaatatctttatttttttagt
gATGAAAATTGttaattaaaattataaaaagaaacatgGATTTCTTGGTA
AACATGAGCTTTGCACTCGATGCTGGACATTTGGTAAGAATCCGGTATAT
TCTattcttctgacattacatcacagacTCAATAGCTtattgaaagtgac
gtaatgactgactttacgtcacttacaaccaatcagctactgggtccatg
gaagacattgcaatatgGTGCATGTCATGAATTGCTTCATtgcattgttt
gatctgtcactACTTTACCCCTTTGAAAGTCTTTCCAATTTAGAATTATG
TCGTTCACCTTCTCATTTCCAATGAGCTTACTAAAAGCTCTCCAATTTAC
ACAGTGAAATAActggaaattttatttcatttttagaattgtaTGCATGT
TGTTTCAATCATGATTTTAATTGCACTGTCAATGTTACGATCGATGGACT
TTGTCTTGACTATGATTTGCTTTCAAGATATTATatggattttgattttc
aaatccTAGTCAAGTTGAAGTTCTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070377-exon-scaffold_55-1491911889:336947..337679 | TCONS_00070377-exon-scaffold_55-1491911889:336947..337679 | Clytia hemisphaerica | exon |
| TCONS_00070377-exon-scaffold_55-1510915933:336947..337679 | TCONS_00070377-exon-scaffold_55-1510915933:336947..337679 | Clytia hemisphaerica | exon |
| TCONS_00070377-exon-scaffold_55-1575043694:336947..337679 | TCONS_00070377-exon-scaffold_55-1575043694:336947..337679 | Clytia hemisphaerica | exon |
| TCONS_00070377-exon-scaffold_55-1491911889:337983..338123 | TCONS_00070377-exon-scaffold_55-1491911889:337983..338123 | Clytia hemisphaerica | exon |
| TCONS_00070377-exon-scaffold_55-1510915933:337983..338123 | TCONS_00070377-exon-scaffold_55-1510915933:337983..338123 | Clytia hemisphaerica | exon |
| TCONS_00070377-exon-scaffold_55-1575043694:337983..338123 | TCONS_00070377-exon-scaffold_55-1575043694:337983..338123 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_55 | supercontig | scaffold_55:336947..338123 + |
Blast
The following BLAST results are available for this feature:
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